RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 PKD1L2Q7Z442 2459 aa11.44□□□□□ -0.58
HMGXB3-203ENST00000510472 AHCTF1Q8WYP5 2266 aa11.43□□□□□ -0.58
HMGXB3-203ENST00000510472 FAM187AA6NFU0 413 aa11.43□□□□□ -0.58
HMGXB3-203ENST00000510472 A8MU76 341 aa11.43□□□□□ -0.58
HMGXB3-203ENST00000510472 EFCAB8A8MWE9 144 aa11.43□□□□□ -0.58
HMGXB3-203ENST00000510472 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.43□□□□□ -0.58
HMGXB3-203ENST00000510472 AGRPO00253 132 aa11.43□□□□□ -0.58
HMGXB3-203ENST00000510472 KIF1CO43896 1103 aaKnown RBP11.43□□□□□ -0.58
HMGXB3-203ENST00000510472 PRAMEF10O60809 474 aa11.43□□□□□ -0.58
HMGXB3-203ENST00000510472 BANF1O75531 89 aa11.43□□□□□ -0.58
HMGXB3-203ENST00000510472 TTC4O95801 387 aa11.43□□□□□ -0.58
HMGXB3-203ENST00000510472 ESR1P03372 595 aa11.43□□□□□ -0.58
HMGXB3-203ENST00000510472 ITGB6P18564 788 aa11.43□□□□□ -0.58
HMGXB3-203ENST00000510472 PGAM1P18669 254 aa11.43□□□□□ -0.58
HMGXB3-203ENST00000510472 ITPKBP27987 946 aa11.43□□□□□ -0.58
HMGXB3-203ENST00000510472 RPL21P46778 160 aaKnown RBP11.43□□□□□ -0.58
HMGXB3-203ENST00000510472 ITGA8P53708 1063 aa11.43□□□□□ -0.58
HMGXB3-203ENST00000510472 PCBP4P57723 403 aaKnown RBP11.43□□□□□ -0.58
HMGXB3-203ENST00000510472 PPP1CAP62136 330 aa11.43□□□□□ -0.58
HMGXB3-203ENST00000510472 MRPS25P82663 173 aaKnown RBP11.43□□□□□ -0.58
HMGXB3-203ENST00000510472 BRD3Q15059 726 aa11.43□□□□□ -0.58
HMGXB3-203ENST00000510472 LONRF1Q17RB8 773 aa11.43□□□□□ -0.58
HMGXB3-203ENST00000510472 DNAJC21Q5F1R6 531 aaKnown RBP11.43□□□□□ -0.58
HMGXB3-203ENST00000510472 SNAP47Q5SQN1 464 aa11.43□□□□□ -0.58
HMGXB3-203ENST00000510472 PTRHD1Q6GMV3 140 aaKnown RBP11.43□□□□□ -0.58
HMGXB3-203ENST00000510472 ZNF449Q6P9G9 518 aa11.43□□□□□ -0.58
HMGXB3-203ENST00000510472 KLHL35Q6PF15 583 aa11.43□□□□□ -0.58
HMGXB3-203ENST00000510472 DTX1Q86Y01 620 aa11.43□□□□□ -0.58
HMGXB3-203ENST00000510472 DENND6AQ8IWF6 608 aa11.43□□□□□ -0.58
HMGXB3-203ENST00000510472 SPACA3Q8IXA5 215 aa11.43□□□□□ -0.58
HMGXB3-203ENST00000510472 TBC1D21Q8IYX1 336 aa11.43□□□□□ -0.58
HMGXB3-203ENST00000510472 UNC5BQ8IZJ1 945 aa11.43□□□□□ -0.58
HMGXB3-203ENST00000510472 OR4E2Q8NGC2 313 aa11.43□□□□□ -0.58
HMGXB3-203ENST00000510472 ASZ1Q8WWH4 475 aa11.43□□□□□ -0.58
HMGXB3-203ENST00000510472 PMEPA1Q969W9 287 aa11.43□□□□□ -0.58
HMGXB3-203ENST00000510472 SNF8Q96H20 258 aa11.43□□□□□ -0.58
HMGXB3-203ENST00000510472 SLC41A2Q96JW4 573 aa11.43□□□□□ -0.58
HMGXB3-203ENST00000510472 TGM7Q96PF1 710 aa11.43□□□□□ -0.58
HMGXB3-203ENST00000510472 TAAR9Q96RI9 348 aa11.43□□□□□ -0.58
HMGXB3-203ENST00000510472 FERD3LQ96RJ6 166 aa11.43□□□□□ -0.58
HMGXB3-203ENST00000510472 ERP44Q9BS26 406 aa11.43□□□□□ -0.58
HMGXB3-203ENST00000510472 NAT9Q9BTE0 207 aa11.43□□□□□ -0.58
HMGXB3-203ENST00000510472 FBXO8Q9NRD0 319 aa11.43□□□□□ -0.58
HMGXB3-203ENST00000510472 INTS10Q9NVR2 710 aaKnown RBP11.43□□□□□ -0.58
HMGXB3-203ENST00000510472 HRASLS2Q9NWW9 162 aa11.43□□□□□ -0.58
HMGXB3-203ENST00000510472 FOXJ2Q9P0K8 574 aa11.43□□□□□ -0.58
HMGXB3-203ENST00000510472 AKAP7Q9P0M2 348 aaPredicted RBP11.43□□□□□ -0.58
HMGXB3-203ENST00000510472 GNPTGQ9UJJ9 305 aa11.43□□□□□ -0.58
HMGXB3-203ENST00000510472 TEX264Q9Y6I9 313 aa11.43□□□□□ -0.58
HMGXB3-203ENST00000510472 IGHV5-51A0A0C4DH38 117 aa11.42□□□□□ -0.58
HMGXB3-203ENST00000510472 OR6C74A6NCV1 312 aa11.42□□□□□ -0.58
HMGXB3-203ENST00000510472 EFCAB7A8K855 629 aa11.42□□□□□ -0.58
HMGXB3-203ENST00000510472 E7ESA3 106 aa11.42□□□□□ -0.58
HMGXB3-203ENST00000510472 H3BMM5 538 aa11.42□□□□□ -0.58
HMGXB3-203ENST00000510472 BTN3A3O00478 584 aa11.42□□□□□ -0.58
HMGXB3-203ENST00000510472 RAD51CO43502 376 aa11.42□□□□□ -0.58
HMGXB3-203ENST00000510472 FMO4P31512 558 aa11.42□□□□□ -0.58
HMGXB3-203ENST00000510472 TLE3Q04726 772 aa11.42□□□□□ -0.58
HMGXB3-203ENST00000510472 HSPA14Q0VDF9 509 aa11.42□□□□□ -0.58
HMGXB3-203ENST00000510472 CRYMQ14894 314 aa11.42□□□□□ -0.58
HMGXB3-203ENST00000510472 PLEKHS1Q5SXH7 462 aa11.42□□□□□ -0.58
HMGXB3-203ENST00000510472 STEAP4Q687X5 459 aa11.42□□□□□ -0.58
HMGXB3-203ENST00000510472 DUPD1Q68J44 220 aa11.42□□□□□ -0.58
HMGXB3-203ENST00000510472 ZNF549Q6P9A3 640 aa11.42□□□□□ -0.58
HMGXB3-203ENST00000510472 MAATS1Q7Z4T9 603 aa11.42□□□□□ -0.58
HMGXB3-203ENST00000510472 CNTN4Q8IWV2 1026 aa11.42□□□□□ -0.58
HMGXB3-203ENST00000510472 ADGRF3Q8IZF5 1079 aa11.42□□□□□ -0.58
HMGXB3-203ENST00000510472 PDIK1LQ8N165 341 aa11.42□□□□□ -0.58
HMGXB3-203ENST00000510472 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.42□□□□□ -0.58
HMGXB3-203ENST00000510472 OR52E1Q8NGJ3 308 aa11.42□□□□□ -0.58
HMGXB3-203ENST00000510472 OR5AR1Q8NGP9 310 aa11.42□□□□□ -0.58
HMGXB3-203ENST00000510472 OR5K2Q8NHB8 316 aa11.42□□□□□ -0.58
HMGXB3-203ENST00000510472 LCN9Q8WX39 176 aa11.42□□□□□ -0.58
HMGXB3-203ENST00000510472 ART4Q93070 314 aa11.42□□□□□ -0.58
HMGXB3-203ENST00000510472 LRRC39Q96DD0 335 aa11.42□□□□□ -0.58
HMGXB3-203ENST00000510472 PANX3Q96QZ0 392 aa11.42□□□□□ -0.58
HMGXB3-203ENST00000510472 CD180Q99467 661 aa11.42□□□□□ -0.58
HMGXB3-203ENST00000510472 MENTQ9BUN1 341 aa11.42□□□□□ -0.58
HMGXB3-203ENST00000510472 DDA1Q9BW61 102 aa11.42□□□□□ -0.58
HMGXB3-203ENST00000510472 TSSK1BQ9BXA7 367 aa11.42□□□□□ -0.58
HMGXB3-203ENST00000510472 DPH1Q9BZG8 443 aa11.42□□□□□ -0.58
HMGXB3-203ENST00000510472 C20orf96Q9NUD7 363 aaPredicted RBP11.42□□□□□ -0.58
HMGXB3-203ENST00000510472 SLC39A1Q9NY26 324 aa11.42□□□□□ -0.58
HMGXB3-203ENST00000510472 GRHL1Q9NZI5 618 aa11.42□□□□□ -0.58
HMGXB3-203ENST00000510472 GALPQ9UBC7 116 aa11.42□□□□□ -0.58
HMGXB3-203ENST00000510472 KLHL3Q9UH77 587 aa11.42□□□□□ -0.58
HMGXB3-203ENST00000510472 CDC23Q9UJX2 597 aa11.42□□□□□ -0.58
HMGXB3-203ENST00000510472 FBXO5Q9UKT4 447 aa11.42□□□□□ -0.58
HMGXB3-203ENST00000510472 ASF1AQ9Y294 204 aa11.42□□□□□ -0.58
HMGXB3-203ENST00000510472 CRYL1Q9Y2S2 319 aa11.42□□□□□ -0.58
HMGXB3-203ENST00000510472 SNX24Q9Y343 169 aa11.42□□□□□ -0.58
HMGXB3-203ENST00000510472 B3GALT1Q9Y5Z6 326 aa11.42□□□□□ -0.58
HMGXB3-203ENST00000510472 KPNA5O15131 536 aa11.41□□□□□ -0.58
HMGXB3-203ENST00000510472 PFDN6O15212 129 aa11.41□□□□□ -0.58
HMGXB3-203ENST00000510472 RRP8O43159 456 aaKnown RBP11.41□□□□□ -0.58
HMGXB3-203ENST00000510472 APOA4P06727 396 aa11.41□□□□□ -0.58
HMGXB3-203ENST00000510472 F7P08709 466 aaPredicted RBP11.41□□□□□ -0.58
HMGXB3-203ENST00000510472 PKMP14618 531 aaKnown RBP11.41□□□□□ -0.58
HMGXB3-203ENST00000510472 NELFEP18615 380 aaKnown RBP11.41□□□□□ -0.58
HMGXB3-203ENST00000510472 GABRB3P28472 473 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms