RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 HS6ST1O60243 411 aa4.74□□□□□ -1.65
TOPBP1-206ENST00000508524 ZNF821O75541 412 aaPredicted RBP4.74□□□□□ -1.65
TOPBP1-206ENST00000508524 CSPG5O95196 566 aa4.74□□□□□ -1.65
TOPBP1-206ENST00000508524 ITGA3P26006 1051 aa4.74□□□□□ -1.65
TOPBP1-206ENST00000508524 PPARGP37231 505 aaPredicted RBP4.74□□□□□ -1.65
TOPBP1-206ENST00000508524 PRAMEP78395 509 aa4.74□□□□□ -1.65
TOPBP1-206ENST00000508524 PRKAA1Q13131 559 aa4.74□□□□□ -1.65
TOPBP1-206ENST00000508524 KRT32Q14532 448 aa4.74□□□□□ -1.65
TOPBP1-206ENST00000508524 ZNF790Q6PG37 636 aa4.74□□□□□ -1.65
TOPBP1-206ENST00000508524 DENND5BQ6ZUT9 1274 aa4.74□□□□□ -1.65
TOPBP1-206ENST00000508524 SH2D5Q6ZV89 423 aa4.74□□□□□ -1.65
TOPBP1-206ENST00000508524 IKBIPQ70UQ0 350 aa4.74□□□□□ -1.65
TOPBP1-206ENST00000508524 TICAM1Q8IUC6 712 aa4.74□□□□□ -1.65
TOPBP1-206ENST00000508524 WDTC1Q8N5D0 677 aa4.74□□□□□ -1.65
TOPBP1-206ENST00000508524 ART5Q96L15 291 aa4.74□□□□□ -1.65
TOPBP1-206ENST00000508524 ZNF582Q96NG8 517 aaPredicted RBP4.74□□□□□ -1.65
TOPBP1-206ENST00000508524 DDOQ99489 341 aa4.74□□□□□ -1.65
TOPBP1-206ENST00000508524 NCAPGQ9BPX3 1015 aa4.74□□□□□ -1.65
TOPBP1-206ENST00000508524 DENND2DQ9H6A0 471 aaPredicted RBP4.74□□□□□ -1.65
TOPBP1-206ENST00000508524 KAT14Q9H8E8 782 aa4.74□□□□□ -1.65
TOPBP1-206ENST00000508524 SMC4Q9NTJ3 1288 aa4.74□□□□□ -1.65
TOPBP1-206ENST00000508524 OGFRQ9NZT2 677 aa4.74□□□□□ -1.65
TOPBP1-206ENST00000508524 ERVK-7P63135 1459 aa4.74□□□□□ -1.65
TOPBP1-206ENST00000508524 NWD1Q149M9 1564 aa4.74□□□□□ -1.65
TOPBP1-206ENST00000508524 KDM5AP29375 1690 aaKnown RBP4.73□□□□□ -1.65
TOPBP1-206ENST00000508524 STK36Q9NRP7 1315 aa4.73□□□□□ -1.65
TOPBP1-206ENST00000508524 A0A087X0M5 115 aa4.73□□□□□ -1.65
TOPBP1-206ENST00000508524 A0A1B0GX30 115 aa4.73□□□□□ -1.65
TOPBP1-206ENST00000508524 MBD4O95243 580 aa4.73□□□□□ -1.65
TOPBP1-206ENST00000508524 SCGB1D1O95968 90 aa4.73□□□□□ -1.65
TOPBP1-206ENST00000508524 CLPTM1O96005 669 aa4.73□□□□□ -1.65
TOPBP1-206ENST00000508524 GH2P01242 217 aa4.73□□□□□ -1.65
TOPBP1-206ENST00000508524 GABRB1P18505 474 aa4.73□□□□□ -1.65
TOPBP1-206ENST00000508524 TM4SF1P30408 202 aa4.73□□□□□ -1.65
TOPBP1-206ENST00000508524 IKQ13123 557 aaPredicted RBP4.73□□□□□ -1.65
TOPBP1-206ENST00000508524 ZFP69Q49AA0 526 aa4.73□□□□□ -1.65
TOPBP1-206ENST00000508524 HAUS3Q68CZ6 603 aa4.73□□□□□ -1.65
TOPBP1-206ENST00000508524 KLC3Q6P597 504 aa4.73□□□□□ -1.65
TOPBP1-206ENST00000508524 GALNT5Q7Z7M9 940 aa4.73□□□□□ -1.65
TOPBP1-206ENST00000508524 ISCA2Q86U28 154 aa4.73□□□□□ -1.65
TOPBP1-206ENST00000508524 GPALPP1Q8IXQ4 340 aa4.73□□□□□ -1.65
TOPBP1-206ENST00000508524 NGEFQ8N5V2 710 aa4.73□□□□□ -1.65
TOPBP1-206ENST00000508524 HCAR2Q8TDS4 363 aa4.73□□□□□ -1.65
TOPBP1-206ENST00000508524 FGF22Q9HCT0 170 aa4.73□□□□□ -1.65
TOPBP1-206ENST00000508524 COQ3Q9NZJ6 369 aa4.73□□□□□ -1.65
TOPBP1-206ENST00000508524 CACNG5Q9UF02 275 aa4.73□□□□□ -1.65
TOPBP1-206ENST00000508524 FBXL17Q9UF56 701 aa4.73□□□□□ -1.65
TOPBP1-206ENST00000508524 NENFQ9UMX5 172 aa4.73□□□□□ -1.65
TOPBP1-206ENST00000508524 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.73□□□□□ -1.65
TOPBP1-206ENST00000508524 TET3O43151 1660 aa4.73□□□□□ -1.65
TOPBP1-206ENST00000508524 ZNF644Q9H582 1327 aaPredicted RBP4.72□□□□□ -1.65
TOPBP1-206ENST00000508524 GPATCH8Q9UKJ3 1502 aaKnown RBP4.72□□□□□ -1.65
TOPBP1-206ENST00000508524 MYO1GB0I1T2 1018 aa4.72□□□□□ -1.65
TOPBP1-206ENST00000508524 EXTL3O43909 919 aa4.72□□□□□ -1.65
TOPBP1-206ENST00000508524 TPPPO94811 219 aa4.72□□□□□ -1.65
TOPBP1-206ENST00000508524 PLA2G4BP0C869 781 aa4.72□□□□□ -1.65
TOPBP1-206ENST00000508524 PON1P27169 355 aa4.72□□□□□ -1.65
TOPBP1-206ENST00000508524 MAPK4P31152 587 aa4.72□□□□□ -1.65
TOPBP1-206ENST00000508524 ARL3P36405 182 aa4.72□□□□□ -1.65
TOPBP1-206ENST00000508524 PPP2R2BQ00005 443 aa4.72□□□□□ -1.65
TOPBP1-206ENST00000508524 SETQ01105 290 aaPredicted RBP4.72□□□□□ -1.65
TOPBP1-206ENST00000508524 TMEM187Q14656 261 aa4.72□□□□□ -1.65
TOPBP1-206ENST00000508524 FFAR4Q5NUL3 377 aa4.72□□□□□ -1.65
TOPBP1-206ENST00000508524 CCDC70Q6NSX1 233 aa4.72□□□□□ -1.65
TOPBP1-206ENST00000508524 TMEM154Q6P9G4 183 aa4.72□□□□□ -1.65
TOPBP1-206ENST00000508524 FASTKD5Q7L8L6 764 aaKnown RBP4.72□□□□□ -1.65
TOPBP1-206ENST00000508524 SCYL3Q8IZE3 742 aa4.72□□□□□ -1.65
TOPBP1-206ENST00000508524 TMTC2Q8N394 836 aa4.72□□□□□ -1.65
TOPBP1-206ENST00000508524 DDHD1Q8NEL9 900 aa4.72□□□□□ -1.65
TOPBP1-206ENST00000508524 USP6NLQ92738 828 aa4.72□□□□□ -1.65
TOPBP1-206ENST00000508524 DNAJC18Q9H819 358 aa4.72□□□□□ -1.65
TOPBP1-206ENST00000508524 ERVMER34-1Q9H9K5 563 aa4.72□□□□□ -1.65
TOPBP1-206ENST00000508524 ZNF71Q9NQZ8 489 aaPredicted RBP4.72□□□□□ -1.65
TOPBP1-206ENST00000508524 INTS10Q9NVR2 710 aaKnown RBP4.72□□□□□ -1.65
TOPBP1-206ENST00000508524 TMEM181Q9P2C4 612 aa4.72□□□□□ -1.65
TOPBP1-206ENST00000508524 PYGO1Q9Y3Y4 419 aa4.72□□□□□ -1.65
TOPBP1-206ENST00000508524 NKTRP30414 1462 aaKnown RBP4.72□□□□□ -1.65
TOPBP1-206ENST00000508524 ABCC3O15438 1527 aa4.72□□□□□ -1.65
TOPBP1-206ENST00000508524 CACNA1FO60840 1977 aa4.71□□□□□ -1.66
TOPBP1-206ENST00000508524 MBD5Q9P267 1494 aa4.71□□□□□ -1.66
TOPBP1-206ENST00000508524 GOLGB1Q14789 3259 aaKnown RBP4.71□□□□□ -1.66
TOPBP1-206ENST00000508524 MSH6P52701 1360 aa4.71□□□□□ -1.66
TOPBP1-206ENST00000508524 DHX29Q7Z478 1369 aaKnown RBP4.71□□□□□ -1.66
TOPBP1-206ENST00000508524 PNPLA6Q8IY17 1366 aa4.71□□□□□ -1.66
TOPBP1-206ENST00000508524 OR6C76A6NM76 312 aa4.71□□□□□ -1.66
TOPBP1-206ENST00000508524 ERI2A8K979 691 aaKnown RBP4.71□□□□□ -1.66
TOPBP1-206ENST00000508524 NDUFS4O43181 175 aa4.71□□□□□ -1.66
TOPBP1-206ENST00000508524 USO1O60763 962 aaKnown RBP4.71□□□□□ -1.66
TOPBP1-206ENST00000508524 H1F0P07305 194 aaKnown RBP4.71□□□□□ -1.66
TOPBP1-206ENST00000508524 ACP2P11117 423 aa4.71□□□□□ -1.66
TOPBP1-206ENST00000508524 KRT5P13647 590 aa4.71□□□□□ -1.66
TOPBP1-206ENST00000508524 LUMP51884 338 aaPredicted RBP4.71□□□□□ -1.66
TOPBP1-206ENST00000508524 CDH8P55286 799 aa4.71□□□□□ -1.66
TOPBP1-206ENST00000508524 IRX1P78414 480 aaPredicted RBP4.71□□□□□ -1.66
TOPBP1-206ENST00000508524 BRINP3Q76B58 766 aa4.71□□□□□ -1.66
TOPBP1-206ENST00000508524 CHST9Q7L1S5 443 aa4.71□□□□□ -1.66
TOPBP1-206ENST00000508524 ARID3BQ8IVW6 561 aaPredicted RBP4.71□□□□□ -1.66
TOPBP1-206ENST00000508524 TEX11Q8IYF3 940 aa4.71□□□□□ -1.66
TOPBP1-206ENST00000508524 SCFD2Q8WU76 684 aa4.71□□□□□ -1.66
TOPBP1-206ENST00000508524 ZNF653Q96CK0 615 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms