RNA–Protein interactions for RNA: ENST00000506971.1

CALCOCO2-208, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 519 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-208ENST00000506971 MLPHQ9BV36 600 aaPredicted RBP4.31□□□□□ -1.72
CALCOCO2-208ENST00000506971 NT5C3AQ9H0P0 336 aa4.31□□□□□ -1.72
CALCOCO2-208ENST00000506971 TTYH1Q9H313 450 aaPredicted RBP4.31□□□□□ -1.72
CALCOCO2-208ENST00000506971 LIN28AQ9H9Z2 209 aaKnown RBP4.31□□□□□ -1.72
CALCOCO2-208ENST00000506971 ZNF304Q9HCX3 659 aa4.31□□□□□ -1.72
CALCOCO2-208ENST00000506971 KCNK9Q9NPC2 374 aa4.31□□□□□ -1.72
CALCOCO2-208ENST00000506971 ZNHIT6Q9NWK9 470 aaKnown RBP4.31□□□□□ -1.72
CALCOCO2-208ENST00000506971 MCM9Q9NXL9 1143 aa4.31□□□□□ -1.72
CALCOCO2-208ENST00000506971 ACTR3BQ9P1U1 418 aa4.31□□□□□ -1.72
CALCOCO2-208ENST00000506971 RABL2AQ9UBK7 228 aaPredicted RBP4.31□□□□□ -1.72
CALCOCO2-208ENST00000506971 EXTL2Q9UBQ6 330 aa4.31□□□□□ -1.72
CALCOCO2-208ENST00000506971 CD207Q9UJ71 328 aa4.31□□□□□ -1.72
CALCOCO2-208ENST00000506971 ICKQ9UPZ9 632 aa4.31□□□□□ -1.72
CALCOCO2-208ENST00000506971 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.31□□□□□ -1.729e-8■■□□□ 13.8
CALCOCO2-208ENST00000506971 PTGDR2Q9Y5Y4 395 aa4.31□□□□□ -1.72
CALCOCO2-208ENST00000506971 SESN1Q9Y6P5 492 aa4.31□□□□□ -1.72
CALCOCO2-208ENST00000506971 KIF13BQ9NQT8 1826 aa4.3□□□□□ -1.72
CALCOCO2-208ENST00000506971 ABCB11O95342 1321 aa4.3□□□□□ -1.72
CALCOCO2-208ENST00000506971 MYO3BQ8WXR4 1341 aa4.3□□□□□ -1.72
CALCOCO2-208ENST00000506971 LOC105369274A0A096LPK9 316 aa4.3□□□□□ -1.72
CALCOCO2-208ENST00000506971 LOC102723532A0A0G2JNH3 316 aa4.3□□□□□ -1.72
CALCOCO2-208ENST00000506971 RNF103-CHMP3A0A140T963 221 aa4.3□□□□□ -1.72
CALCOCO2-208ENST00000506971 A0A1B0GVT2 93 aa4.3□□□□□ -1.72
CALCOCO2-208ENST00000506971 AGAP5A6NIR3 686 aa4.3□□□□□ -1.72
CALCOCO2-208ENST00000506971 BTBD18B2RXH4 712 aa4.3□□□□□ -1.72
CALCOCO2-208ENST00000506971 RNF103O00237 685 aa4.3□□□□□ -1.72
CALCOCO2-208ENST00000506971 ZNF263O14978 683 aa4.3□□□□□ -1.72
CALCOCO2-208ENST00000506971 MDM4O15151 490 aa4.3□□□□□ -1.72
CALCOCO2-208ENST00000506971 RTN2O75298 545 aa4.3□□□□□ -1.72
CALCOCO2-208ENST00000506971 PSMD10O75832 226 aa4.3□□□□□ -1.72
CALCOCO2-208ENST00000506971 SUPT20HL2P0C7V6 817 aa4.3□□□□□ -1.72
CALCOCO2-208ENST00000506971 SFTPCP11686 197 aa4.3□□□□□ -1.72
CALCOCO2-208ENST00000506971 CHN1P15882 459 aa4.3□□□□□ -1.72
CALCOCO2-208ENST00000506971 TYMPP19971 482 aa4.3□□□□□ -1.72
CALCOCO2-208ENST00000506971 CASQ1P31415 396 aa4.3□□□□□ -1.72
CALCOCO2-208ENST00000506971 TTKP33981 857 aa4.3□□□□□ -1.72
CALCOCO2-208ENST00000506971 CASP3P42574 277 aa4.3□□□□□ -1.72
CALCOCO2-208ENST00000506971 NPY4RP50391 375 aa4.3□□□□□ -1.72
CALCOCO2-208ENST00000506971 STAT2P52630 851 aa4.3□□□□□ -1.72
CALCOCO2-208ENST00000506971 HSPA2P54652 639 aa4.3□□□□□ -1.72
CALCOCO2-208ENST00000506971 SLC26A5P58743 744 aa4.3□□□□□ -1.72
CALCOCO2-208ENST00000506971 ARF5P84085 180 aa4.3□□□□□ -1.72
CALCOCO2-208ENST00000506971 TROAPQ12815 778 aa4.3□□□□□ -1.72
CALCOCO2-208ENST00000506971 GPS2Q13227 327 aa4.3□□□□□ -1.72
CALCOCO2-208ENST00000506971 ITGA7Q13683 1181 aa4.3□□□□□ -1.72
CALCOCO2-208ENST00000506971 ALCAMQ13740 583 aa4.3□□□□□ -1.72
CALCOCO2-208ENST00000506971 CAPSQ13938 189 aa4.3□□□□□ -1.72
CALCOCO2-208ENST00000506971 ALG11Q2TAA5 492 aa4.3□□□□□ -1.72
CALCOCO2-208ENST00000506971 CAPRIN2Q6IMN6 1127 aaKnown RBP4.3□□□□□ -1.72
CALCOCO2-208ENST00000506971 ARMCX5Q6P1M9 558 aa4.3□□□□□ -1.72
CALCOCO2-208ENST00000506971 SUSD1Q6UWL2 747 aa4.3□□□□□ -1.72
CALCOCO2-208ENST00000506971 LINC00696Q6ZRV3 163 aa4.3□□□□□ -1.72
CALCOCO2-208ENST00000506971 C15orf52Q6ZUT6 534 aaKnown RBP4.3□□□□□ -1.72
CALCOCO2-208ENST00000506971 ERN2Q76MJ5 926 aaKnown RBP4.3□□□□□ -1.72
CALCOCO2-208ENST00000506971 ZER1Q7Z7L7 766 aa4.3□□□□□ -1.72
CALCOCO2-208ENST00000506971 NR2C2APQ86WQ0 139 aa4.3□□□□□ -1.72
CALCOCO2-208ENST00000506971 FAM114A1Q8IWE2 563 aa4.3□□□□□ -1.72
CALCOCO2-208ENST00000506971 ADHFE1Q8IWW8 467 aa4.3□□□□□ -1.72
CALCOCO2-208ENST00000506971 DCP1BQ8IZD4 617 aaKnown RBP4.3□□□□□ -1.72
CALCOCO2-208ENST00000506971 OR4N4Q8N0Y3 316 aa4.3□□□□□ -1.72
CALCOCO2-208ENST00000506971 KRT222Q8N1A0 295 aa4.3□□□□□ -1.72
CALCOCO2-208ENST00000506971 PAQR4Q8N4S7 273 aaPredicted RBP4.3□□□□□ -1.72
CALCOCO2-208ENST00000506971 LRRC57Q8N9N7 239 aa4.3□□□□□ -1.72
CALCOCO2-208ENST00000506971 IL17RCQ8NAC3 791 aa4.3□□□□□ -1.72
CALCOCO2-208ENST00000506971 MNS1Q8NEH6 495 aa4.3□□□□□ -1.72
CALCOCO2-208ENST00000506971 SAT2Q96F10 170 aaPredicted RBP4.3□□□□□ -1.72
CALCOCO2-208ENST00000506971 CDCA5Q96FF9 252 aa4.3□□□□□ -1.72
CALCOCO2-208ENST00000506971 VPS39Q96JC1 886 aa4.3□□□□□ -1.72
CALCOCO2-208ENST00000506971 RPGRIP1Q96KN7 1286 aa4.3□□□□□ -1.72
CALCOCO2-208ENST00000506971 SYT17Q9BSW7 474 aa4.3□□□□□ -1.72
CALCOCO2-208ENST00000506971 SLC25A23Q9BV35 468 aa4.3□□□□□ -1.72
CALCOCO2-208ENST00000506971 HERC2P3Q9BVR0 1158 aa4.3□□□□□ -1.72
CALCOCO2-208ENST00000506971 TEX13BQ9BXU2 312 aa4.3□□□□□ -1.72
CALCOCO2-208ENST00000506971 TRIM6Q9C030 488 aaPredicted RBP4.3□□□□□ -1.72
CALCOCO2-208ENST00000506971 ST6GALNAC4Q9H4F1 302 aa4.3□□□□□ -1.72
CALCOCO2-208ENST00000506971 SLC32A1Q9H598 525 aa4.3□□□□□ -1.72
CALCOCO2-208ENST00000506971 MAP6D1Q9H9H5 199 aa4.3□□□□□ -1.72
CALCOCO2-208ENST00000506971 SPAG4Q9NPE6 437 aa4.3□□□□□ -1.72
CALCOCO2-208ENST00000506971 KRCC1Q9NPI7 259 aaPredicted RBP4.3□□□□□ -1.72
CALCOCO2-208ENST00000506971 TCP11L1Q9NUJ3 509 aa4.3□□□□□ -1.72
CALCOCO2-208ENST00000506971 TAS2R3Q9NYW6 316 aa4.3□□□□□ -1.72
CALCOCO2-208ENST00000506971 CWC15Q9P013 229 aaKnown RBP4.3□□□□□ -1.72
CALCOCO2-208ENST00000506971 RAI14Q9P0K7 980 aa4.3□□□□□ -1.72
CALCOCO2-208ENST00000506971 IL19Q9UHD0 177 aa4.3□□□□□ -1.72
CALCOCO2-208ENST00000506971 NARFQ9UHQ1 456 aa4.3□□□□□ -1.72
CALCOCO2-208ENST00000506971 RWDD2AQ9UIY3 292 aa4.3□□□□□ -1.72
CALCOCO2-208ENST00000506971 OSGIN1Q9UJX0 560 aa4.3□□□□□ -1.72
CALCOCO2-208ENST00000506971 MAN1B1Q9UKM7 699 aa4.3□□□□□ -1.72
CALCOCO2-208ENST00000506971 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.3□□□□□ -1.72
CALCOCO2-208ENST00000506971 RAP2CQ9Y3L5 183 aa4.3□□□□□ -1.72
CALCOCO2-208ENST00000506971 ADAM18Q9Y3Q7 739 aa4.3□□□□□ -1.72
CALCOCO2-208ENST00000506971 NFE2L3Q9Y4A8 694 aa4.3□□□□□ -1.72
CALCOCO2-208ENST00000506971 TRIM17Q9Y577 477 aa4.3□□□□□ -1.72
CALCOCO2-208ENST00000506971 V9GYY5 206 aaPredicted RBP4.3□□□□□ -1.72
CALCOCO2-208ENST00000506971 LOXHD1Q8IVV2 1947 aa4.3□□□□□ -1.72
CALCOCO2-208ENST00000506971 COL1A1P02452 1464 aaPredicted RBP4.3□□□□□ -1.72
CALCOCO2-208ENST00000506971 PLIN4Q96Q06 1357 aa4.29□□□□□ -1.72
CALCOCO2-208ENST00000506971 UBR3Q6ZT12 1888 aa4.29□□□□□ -1.72
CALCOCO2-208ENST00000506971 LOC100509620A0A075B734 347 aa4.29□□□□□ -1.72
CALCOCO2-208ENST00000506971 TCRBV7S3A2A0A539 114 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms