RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 ESYT3A0FGR9 886 aa8.26□□□□□ -1.09
PDGFC-205ENST00000506880 OR51F1A6NGY5 319 aa8.26□□□□□ -1.09
PDGFC-205ENST00000506880 GFYI3L273 518 aa8.26□□□□□ -1.09
PDGFC-205ENST00000506880 MAP3K7O43318 606 aa8.26□□□□□ -1.09
PDGFC-205ENST00000506880 OR1I1O60431 355 aa8.26□□□□□ -1.09
PDGFC-205ENST00000506880 SDC3O75056 442 aa8.26□□□□□ -1.09
PDGFC-205ENST00000506880 MTX2O75431 263 aa8.26□□□□□ -1.09
PDGFC-205ENST00000506880 PSIP1O75475 530 aaKnown RBP8.26□□□□□ -1.09
PDGFC-205ENST00000506880 C1QAP02745 245 aa8.26□□□□□ -1.09
PDGFC-205ENST00000506880 NUDT17P0C025 328 aa8.26□□□□□ -1.09
PDGFC-205ENST00000506880 RHOXF2BP0C7M4 288 aa8.26□□□□□ -1.09
PDGFC-205ENST00000506880 STMN1P16949 149 aa8.26□□□□□ -1.09
PDGFC-205ENST00000506880 FDXRP22570 491 aa8.26□□□□□ -1.09
PDGFC-205ENST00000506880 HRH2P25021 359 aa8.26□□□□□ -1.09
PDGFC-205ENST00000506880 AK4P27144 223 aaPredicted RBP8.26□□□□□ -1.09
PDGFC-205ENST00000506880 SSTR1P30872 391 aa8.26□□□□□ -1.09
PDGFC-205ENST00000506880 CCR7P32248 378 aa8.26□□□□□ -1.09
PDGFC-205ENST00000506880 SLC19A1P41440 591 aa8.26□□□□□ -1.09
PDGFC-205ENST00000506880 CDKN1CP49918 316 aaPredicted RBP8.26□□□□□ -1.09
PDGFC-205ENST00000506880 GPX6P59796 221 aa8.26□□□□□ -1.09
PDGFC-205ENST00000506880 ATP6V0D1P61421 351 aa8.26□□□□□ -1.09
PDGFC-205ENST00000506880 CTBP1Q13363 440 aa8.26□□□□□ -1.09
PDGFC-205ENST00000506880 PDAP1Q13442 181 aaKnown RBP8.26□□□□□ -1.09
PDGFC-205ENST00000506880 NFE2L1Q14494 772 aa8.26□□□□□ -1.09
PDGFC-205ENST00000506880 SEMA3AQ14563 771 aa8.26□□□□□ -1.09
PDGFC-205ENST00000506880 FASTKD3Q14CZ7 662 aaKnown RBP8.26□□□□□ -1.09
PDGFC-205ENST00000506880 RPE65Q16518 533 aa8.26□□□□□ -1.09
PDGFC-205ENST00000506880 ZNF542PQ5EBM4 170 aa8.26□□□□□ -1.09
PDGFC-205ENST00000506880 CTSL3PQ5NE16 218 aa8.26□□□□□ -1.09
PDGFC-205ENST00000506880 CDCP2Q5VXM1 449 aa8.26□□□□□ -1.09
PDGFC-205ENST00000506880 TIFABQ6ZNK6 161 aa8.26□□□□□ -1.09
PDGFC-205ENST00000506880 SPRED1Q7Z699 444 aa8.26□□□□□ -1.09
PDGFC-205ENST00000506880 RAB44Q7Z6P3 723 aaPredicted RBP8.26□□□□□ -1.09
PDGFC-205ENST00000506880 STRA8Q7Z7C7 330 aa8.26□□□□□ -1.09
PDGFC-205ENST00000506880 ADAMTSL2Q86TH1 951 aa8.26□□□□□ -1.09
PDGFC-205ENST00000506880 GATAD2AQ86YP4 633 aa8.26□□□□□ -1.09
PDGFC-205ENST00000506880 ANKMY2Q8IV38 441 aa8.26□□□□□ -1.09
PDGFC-205ENST00000506880 RASGRP3Q8IV61 690 aa8.26□□□□□ -1.09
PDGFC-205ENST00000506880 DENND6AQ8IWF6 608 aa8.26□□□□□ -1.09
PDGFC-205ENST00000506880 LSMEM2Q8N112 164 aa8.26□□□□□ -1.09
PDGFC-205ENST00000506880 CLDN19Q8N6F1 224 aa8.26□□□□□ -1.09
PDGFC-205ENST00000506880 KYQ8NBH2 561 aa8.26□□□□□ -1.09
PDGFC-205ENST00000506880 OR8K5Q8NH50 307 aa8.26□□□□□ -1.09
PDGFC-205ENST00000506880 IFI44Q8TCB0 444 aa8.26□□□□□ -1.09
PDGFC-205ENST00000506880 HNRNPLLQ8WVV9 542 aaKnown RBP8.26□□□□□ -1.09
PDGFC-205ENST00000506880 LIN37Q96GY3 246 aaPredicted RBP8.26□□□□□ -1.09
PDGFC-205ENST00000506880 C12orf66Q96MD2 445 aa8.26□□□□□ -1.09
PDGFC-205ENST00000506880 FCRL4Q96PJ5 515 aa8.26□□□□□ -1.09
PDGFC-205ENST00000506880 SLC38A3Q99624 504 aa8.26□□□□□ -1.09
PDGFC-205ENST00000506880 RHOXF2Q9BQY4 288 aa8.26□□□□□ -1.09
PDGFC-205ENST00000506880 STRADBQ9C0K7 418 aa8.26□□□□□ -1.09
PDGFC-205ENST00000506880 ABCG4Q9H172 646 aa8.26□□□□□ -1.09
PDGFC-205ENST00000506880 FAM96AQ9H5X1 160 aa8.26□□□□□ -1.09
PDGFC-205ENST00000506880 ANKZF1Q9H8Y5 726 aa8.26□□□□□ -1.09
PDGFC-205ENST00000506880 RDH14Q9HBH5 336 aa8.26□□□□□ -1.09
PDGFC-205ENST00000506880 NINJ2Q9NZG7 142 aa8.26□□□□□ -1.09
PDGFC-205ENST00000506880 SLC23A2Q9UGH3 650 aa8.26□□□□□ -1.09
PDGFC-205ENST00000506880 LNPEPQ9UIQ6 1025 aa8.26□□□□□ -1.09
PDGFC-205ENST00000506880 RABGEF1Q9UJ41 708 aa8.26□□□□□ -1.09
PDGFC-205ENST00000506880 CDYLQ9Y232 598 aa8.26□□□□□ -1.09
PDGFC-205ENST00000506880 KCNK6Q9Y257 313 aa8.26□□□□□ -1.09
PDGFC-205ENST00000506880 KLK4Q9Y5K2 254 aa8.26□□□□□ -1.09
PDGFC-205ENST00000506880 U3KQA8 63 aa8.26□□□□□ -1.09
PDGFC-205ENST00000506880 HEATR5BQ9P2D3 2071 aa8.26□□□□□ -1.09
PDGFC-205ENST00000506880 MN1Q10571 1320 aaPredicted RBP8.26□□□□□ -1.09
PDGFC-205ENST00000506880 A0A087X1B8 175 aa8.25□□□□□ -1.09
PDGFC-205ENST00000506880 IQANK1A0A1B0GTG1 560 aa8.25□□□□□ -1.09
PDGFC-205ENST00000506880 PABPN1LA6NDY0 278 aaKnown RBP8.25□□□□□ -1.09
PDGFC-205ENST00000506880 B4DGG1 531 aa8.25□□□□□ -1.09
PDGFC-205ENST00000506880 CCL22O00626 93 aa8.25□□□□□ -1.09
PDGFC-205ENST00000506880 FFAR2O15552 330 aa8.25□□□□□ -1.09
PDGFC-205ENST00000506880 RIPK2O43353 540 aa8.25□□□□□ -1.09
PDGFC-205ENST00000506880 ZBTB14O43829 449 aa8.25□□□□□ -1.09
PDGFC-205ENST00000506880 OPA1O60313 960 aa8.25□□□□□ -1.09
PDGFC-205ENST00000506880 CDH16O75309 829 aa8.25□□□□□ -1.09
PDGFC-205ENST00000506880 HAUS5O94927 633 aa8.25□□□□□ -1.09
PDGFC-205ENST00000506880 C9P02748 559 aa8.25□□□□□ -1.09
PDGFC-205ENST00000506880 FTH1P19P0C7X4 201 aa8.25□□□□□ -1.09
PDGFC-205ENST00000506880 ERGP11308 486 aa8.25□□□□□ -1.09
PDGFC-205ENST00000506880 BRAFP15056 766 aa8.25□□□□□ -1.09
PDGFC-205ENST00000506880 ZNF37AP17032 561 aaPredicted RBP8.25□□□□□ -1.09
PDGFC-205ENST00000506880 CYP2A7P20853 494 aa8.25□□□□□ -1.09
PDGFC-205ENST00000506880 FMO4P31512 558 aa8.25□□□□□ -1.09
PDGFC-205ENST00000506880 HNMTP50135 292 aa8.25□□□□□ -1.09
PDGFC-205ENST00000506880 RAB28P51157 221 aa8.25□□□□□ -1.09
PDGFC-205ENST00000506880 SIM1P81133 766 aaPredicted RBP8.25□□□□□ -1.09
PDGFC-205ENST00000506880 PRKAA1Q13131 559 aa8.25□□□□□ -1.09
PDGFC-205ENST00000506880 C1orf61Q13536 156 aa8.25□□□□□ -1.09
PDGFC-205ENST00000506880 SPIDRQ14159 915 aa8.25□□□□□ -1.09
PDGFC-205ENST00000506880 KRT33BQ14525 404 aa8.25□□□□□ -1.09
PDGFC-205ENST00000506880 KIR2DS3Q14952 304 aa8.25□□□□□ -1.09
PDGFC-205ENST00000506880 ZKSCAN8Q15776 578 aaPredicted RBP8.25□□□□□ -1.09
PDGFC-205ENST00000506880 KYNUQ16719 465 aa8.25□□□□□ -1.09
PDGFC-205ENST00000506880 TSNAXIP1Q2TAA8 658 aa8.25□□□□□ -1.09
PDGFC-205ENST00000506880 KBTBD12Q3ZCT8 623 aa8.25□□□□□ -1.09
PDGFC-205ENST00000506880 TAF1BQ53T94 588 aaPredicted RBP8.25□□□□□ -1.09
PDGFC-205ENST00000506880 TMEM71Q6P5X7 295 aa8.25□□□□□ -1.09
PDGFC-205ENST00000506880 TRMT10BQ6PF06 316 aaKnown RBP8.25□□□□□ -1.09
PDGFC-205ENST00000506880 ADGRD1Q6QNK2 874 aa8.25□□□□□ -1.09
PDGFC-205ENST00000506880 CES3Q6UWW8 571 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms