RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 SPANXN3Q5MJ09 141 aa7.1□□□□□ -1.27
GYPB-206ENST00000506516 PHF19Q5T6S3 580 aa7.1□□□□□ -1.27
GYPB-206ENST00000506516 NKAIN2Q5VXU1 208 aa7.1□□□□□ -1.27
GYPB-206ENST00000506516 CAPRIN2Q6IMN6 1127 aaKnown RBP7.1□□□□□ -1.27
GYPB-206ENST00000506516 KLHL35Q6PF15 583 aa7.1□□□□□ -1.27
GYPB-206ENST00000506516 WDR74Q6RFH5 385 aaPredicted RBP7.1□□□□□ -1.27
GYPB-206ENST00000506516 UNQ6494/PRO21346Q6UXR6 183 aa7.1□□□□□ -1.27
GYPB-206ENST00000506516 ZNF572Q7Z3I7 529 aaPredicted RBP7.1□□□□□ -1.27
GYPB-206ENST00000506516 LDB1Q86U70 411 aaPredicted RBP7.1□□□□□ -1.27
GYPB-206ENST00000506516 MARCH9Q86YJ5 346 aa7.1□□□□□ -1.27
GYPB-206ENST00000506516 PLXDC1Q8IUK5 500 aa7.1□□□□□ -1.27
GYPB-206ENST00000506516 CILP2Q8IUL8 1156 aa7.1□□□□□ -1.27
GYPB-206ENST00000506516 OR4D9Q8NGE8 314 aa7.1□□□□□ -1.27
GYPB-206ENST00000506516 WDR36Q8NI36 951 aaKnown RBP7.1□□□□□ -1.27
GYPB-206ENST00000506516 NAT14Q8WUY8 206 aa7.1□□□□□ -1.27
GYPB-206ENST00000506516 NCSTNQ92542 709 aa7.1□□□□□ -1.27
GYPB-206ENST00000506516 TFGQ92734 400 aaPredicted RBP7.1□□□□□ -1.27
GYPB-206ENST00000506516 NXPE2Q96DL1 559 aa7.1□□□□□ -1.27
GYPB-206ENST00000506516 ATXN7L3BQ96GX2 97 aa7.1□□□□□ -1.27
GYPB-206ENST00000506516 C12orf66Q96MD2 445 aa7.1□□□□□ -1.27
GYPB-206ENST00000506516 FERD3LQ96RJ6 166 aa7.1□□□□□ -1.27
GYPB-206ENST00000506516 CMKLR1Q99788 373 aa7.1□□□□□ -1.27
GYPB-206ENST00000506516 TRIM51Q9BSJ1 452 aa7.1□□□□□ -1.27
GYPB-206ENST00000506516 TBC1D10AQ9BXI6 508 aa7.1□□□□□ -1.27
GYPB-206ENST00000506516 SAP130Q9H0E3 1048 aa7.1□□□□□ -1.27
GYPB-206ENST00000506516 CCDC68Q9H2F9 335 aa7.1□□□□□ -1.27
GYPB-206ENST00000506516 CCDC86Q9H6F5 360 aaKnown RBP7.1□□□□□ -1.27
GYPB-206ENST00000506516 POLR1BQ9H9Y6 1135 aa7.1□□□□□ -1.27
GYPB-206ENST00000506516 RDH14Q9HBH5 336 aa7.1□□□□□ -1.27
GYPB-206ENST00000506516 PPANQ9NQ55 473 aaKnown RBP7.1□□□□□ -1.27
GYPB-206ENST00000506516 C20orf96Q9NUD7 363 aaPredicted RBP7.1□□□□□ -1.27
GYPB-206ENST00000506516 IMP3Q9NV31 184 aaKnown RBP7.1□□□□□ -1.27
GYPB-206ENST00000506516 INTS10Q9NVR2 710 aaKnown RBP7.1□□□□□ -1.27
GYPB-206ENST00000506516 WHRNQ9P202 907 aa7.1□□□□□ -1.27
GYPB-206ENST00000506516 MARCH4Q9P2E8 410 aaPredicted RBP7.1□□□□□ -1.27
GYPB-206ENST00000506516 ZC3H7BQ9UGR2 993 aaKnown RBP7.1□□□□□ -1.27
GYPB-206ENST00000506516 PCDHB1Q9Y5F3 818 aa7.1□□□□□ -1.27
GYPB-206ENST00000506516 ENTPD2Q9Y5L3 495 aa7.1□□□□□ -1.27
GYPB-206ENST00000506516 TDRD6O60522 2096 aaKnown RBP7.1□□□□□ -1.27
GYPB-206ENST00000506516 CABIN1Q9Y6J0 2220 aa7.09□□□□□ -1.27
GYPB-206ENST00000506516 CCDC187A0A096LP49 1063 aa7.09□□□□□ -1.27
GYPB-206ENST00000506516 ZCWPW2A0A1B0GU75 182 aa7.09□□□□□ -1.27
GYPB-206ENST00000506516 LILRA5A6NI73 299 aa7.09□□□□□ -1.27
GYPB-206ENST00000506516 C1QTNF9BB2RNN3 333 aa7.09□□□□□ -1.27
GYPB-206ENST00000506516 KDM1AO60341 852 aa7.09□□□□□ -1.27
GYPB-206ENST00000506516 MAN1A2O60476 641 aa7.09□□□□□ -1.27
GYPB-206ENST00000506516 ICMTO60725 284 aa7.09□□□□□ -1.27
GYPB-206ENST00000506516 APOA4P06727 396 aa7.09□□□□□ -1.27
GYPB-206ENST00000506516 PROS1P07225 676 aa7.09□□□□□ -1.27
GYPB-206ENST00000506516 C1QTNF9P0C862 333 aa7.09□□□□□ -1.27
GYPB-206ENST00000506516 TYRP1P17643 537 aa7.09□□□□□ -1.27
GYPB-206ENST00000506516 ITGB6P18564 788 aa7.09□□□□□ -1.27
GYPB-206ENST00000506516 CHRM3P20309 590 aa7.09□□□□□ -1.27
GYPB-206ENST00000506516 RPS3P23396 243 aaKnown RBP eCLIP7.09□□□□□ -1.271e-8■■■■■ 38.6
GYPB-206ENST00000506516 RBMS1P29558 406 aaKnown RBP7.09□□□□□ -1.27
GYPB-206ENST00000506516 FMO4P31512 558 aa7.09□□□□□ -1.27
GYPB-206ENST00000506516 ELK3P41970 407 aa7.09□□□□□ -1.27
GYPB-206ENST00000506516 LSSP48449 732 aa7.09□□□□□ -1.27
GYPB-206ENST00000506516 ADARP55265 1226 aaKnown RBP7.09□□□□□ -1.27
GYPB-206ENST00000506516 EIF3BP55884 814 aaKnown RBP7.09□□□□□ -1.27
GYPB-206ENST00000506516 MRPS25P82663 173 aaKnown RBP7.09□□□□□ -1.27
GYPB-206ENST00000506516 CYP4F3Q08477 520 aa7.09□□□□□ -1.27
GYPB-206ENST00000506516 HSPA14Q0VDF9 509 aa7.09□□□□□ -1.27
GYPB-206ENST00000506516 BOP1Q14137 746 aaKnown RBP7.09□□□□□ -1.27
GYPB-206ENST00000506516 GPR18Q14330 331 aa7.09□□□□□ -1.27
GYPB-206ENST00000506516 RTP5Q14D33 572 aa7.09□□□□□ -1.27
GYPB-206ENST00000506516 BRD3Q15059 726 aa7.09□□□□□ -1.27
GYPB-206ENST00000506516 PLCL1Q15111 1095 aa7.09□□□□□ -1.27
GYPB-206ENST00000506516 TMED2Q15363 201 aa7.09□□□□□ -1.27
GYPB-206ENST00000506516 TYSND1Q2T9J0 566 aa7.09□□□□□ -1.27
GYPB-206ENST00000506516 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.09□□□□□ -1.27
GYPB-206ENST00000506516 HSP90AA5PQ58FG0 334 aa7.09□□□□□ -1.27
GYPB-206ENST00000506516 COX20Q5RI15 118 aa7.09□□□□□ -1.27
GYPB-206ENST00000506516 DUPD1Q68J44 220 aa7.09□□□□□ -1.27
GYPB-206ENST00000506516 ZNF470Q6ECI4 717 aa7.09□□□□□ -1.27
GYPB-206ENST00000506516 C8orf74Q6P047 294 aa7.09□□□□□ -1.27
GYPB-206ENST00000506516 TTC23LQ6PF05 361 aa7.09□□□□□ -1.27
GYPB-206ENST00000506516 FOXR1Q6PIV2 292 aa7.09□□□□□ -1.27
GYPB-206ENST00000506516 MICALCLQ6ZW33 695 aa7.09□□□□□ -1.27
GYPB-206ENST00000506516 CENPUQ71F23 418 aa7.09□□□□□ -1.27
GYPB-206ENST00000506516 RAB11FIP2Q7L804 512 aa7.09□□□□□ -1.27
GYPB-206ENST00000506516 OTOAQ7RTW8 1153 aa7.09□□□□□ -1.27
GYPB-206ENST00000506516 ZNF761Q86XN6 746 aaPredicted RBP7.09□□□□□ -1.27
GYPB-206ENST00000506516 PALM2Q8IXS6 379 aa7.09□□□□□ -1.27
GYPB-206ENST00000506516 FBXO39Q8N4B4 442 aa7.09□□□□□ -1.27
GYPB-206ENST00000506516 LILRA3Q8N6C8 439 aaPredicted RBP7.09□□□□□ -1.27
GYPB-206ENST00000506516 CEP112Q8N8E3 955 aa7.09□□□□□ -1.27
GYPB-206ENST00000506516 GATA6Q92908 595 aa7.09□□□□□ -1.27
GYPB-206ENST00000506516 ZDHHC12Q96GR4 267 aa7.09□□□□□ -1.27
GYPB-206ENST00000506516 LIN37Q96GY3 246 aaPredicted RBP7.09□□□□□ -1.27
GYPB-206ENST00000506516 TRIM56Q9BRZ2 755 aaKnown RBP7.09□□□□□ -1.27
GYPB-206ENST00000506516 FAM167BQ9BTA0 163 aa7.09□□□□□ -1.27
GYPB-206ENST00000506516 FOXP3Q9BZS1 431 aa7.09□□□□□ -1.27
GYPB-206ENST00000506516 P2RY12Q9H244 342 aa7.09□□□□□ -1.27
GYPB-206ENST00000506516 OR52A5Q9H2C5 316 aa7.09□□□□□ -1.27
GYPB-206ENST00000506516 DPH5Q9H2P9 285 aa7.09□□□□□ -1.27
GYPB-206ENST00000506516 SEMA6CQ9H3T2 930 aa7.09□□□□□ -1.27
GYPB-206ENST00000506516 MVB12BQ9H7P6 319 aa7.09□□□□□ -1.27
GYPB-206ENST00000506516 TIMMDC1Q9NPL8 285 aa7.09□□□□□ -1.27
GYPB-206ENST00000506516 POLG2Q9UHN1 485 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms