RNA–Protein interactions for RNA: ENST00000504290.5

TP53-208, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-208ENST00000504290 GINS2Q9Y248 185 aa11.75□□□□□ -0.53
TP53-208ENST00000504290 PTGDR2Q9Y5Y4 395 aa11.75□□□□□ -0.53
TP53-208ENST00000504290 RGS10O43665 173 aa11.74□□□□□ -0.53
TP53-208ENST00000504290 MYCP01106 439 aaPredicted RBP11.74□□□□□ -0.53
TP53-208ENST00000504290 PRR35P0CG20 571 aa11.74□□□□□ -0.53
TP53-208ENST00000504290 TGFBR2P37173 567 aa11.74□□□□□ -0.53
TP53-208ENST00000504290 ETV6P41212 452 aa11.74□□□□□ -0.53
TP53-208ENST00000504290 PNPLA4P41247 253 aa11.74□□□□□ -0.53
TP53-208ENST00000504290 MASP1P48740 699 aa11.74□□□□□ -0.53
TP53-208ENST00000504290 DIO3P55073 304 aa11.74□□□□□ -0.53
TP53-208ENST00000504290 CDH13P55290 713 aa11.74□□□□□ -0.53
TP53-208ENST00000504290 STARD3Q14849 445 aa11.74□□□□□ -0.53
TP53-208ENST00000504290 YIF1BQ5BJH7 314 aa11.74□□□□□ -0.53
TP53-208ENST00000504290 SPESP1Q6UW49 350 aa11.74□□□□□ -0.53
TP53-208ENST00000504290 VN1R5Q7Z5H4 357 aa11.74□□□□□ -0.53
TP53-208ENST00000504290 NECAB2Q7Z6G3 386 aa11.74□□□□□ -0.53
TP53-208ENST00000504290 RAB44Q7Z6P3 723 aaPredicted RBP11.74□□□□□ -0.53
TP53-208ENST00000504290 B3GNT8Q7Z7M8 397 aa11.74□□□□□ -0.53
TP53-208ENST00000504290 MICU2Q8IYU8 434 aa11.74□□□□□ -0.53
TP53-208ENST00000504290 SLC22A15Q8IZD6 547 aa11.74□□□□□ -0.53
TP53-208ENST00000504290 PSD4Q8NDX1 1056 aa11.74□□□□□ -0.53
TP53-208ENST00000504290 SLC38A4Q969I6 547 aa11.74□□□□□ -0.53
TP53-208ENST00000504290 NT5C3BQ969T7 300 aa11.74□□□□□ -0.53
TP53-208ENST00000504290 ARMC5Q96C12 935 aa11.74□□□□□ -0.53
TP53-208ENST00000504290 GDF15Q99988 308 aa11.74□□□□□ -0.53
TP53-208ENST00000504290 REXO4Q9GZR2 422 aaKnown RBP11.74□□□□□ -0.53
TP53-208ENST00000504290 ALG9Q9H6U8 611 aa11.74□□□□□ -0.53
TP53-208ENST00000504290 TREX1Q9NSU2 369 aa11.74□□□□□ -0.53
TP53-208ENST00000504290 FLRT1Q9NZU1 646 aa11.74□□□□□ -0.53
TP53-208ENST00000504290 SLAMF8Q9P0V8 285 aa11.74□□□□□ -0.53
TP53-208ENST00000504290 RAPGEFL1Q9UHV5 662 aa11.74□□□□□ -0.53
TP53-208ENST00000504290 ERVW-1Q9UQF0 538 aa11.74□□□□□ -0.53
TP53-208ENST00000504290 PCDHGB6Q9Y5F9 930 aa11.74□□□□□ -0.53
TP53-208ENST00000504290 PEX16Q9Y5Y5 336 aa11.74□□□□□ -0.53
TP53-208ENST00000504290 FAM234BA2RU67 622 aa11.74□□□□□ -0.53
TP53-208ENST00000504290 B8ZZF3 427 aa11.74□□□□□ -0.53
TP53-208ENST00000504290 RECQL4O94761 1208 aa11.74□□□□□ -0.53
TP53-208ENST00000504290 YES1P07947 543 aa11.74□□□□□ -0.53
TP53-208ENST00000504290 LINC00032P0C843 101 aa11.74□□□□□ -0.53
TP53-208ENST00000504290 KCNE1P15382 129 aa11.74□□□□□ -0.53
TP53-208ENST00000504290 HOXB6P17509 224 aaKnown RBP11.74□□□□□ -0.53
TP53-208ENST00000504290 CES1P23141 567 aa11.74□□□□□ -0.53
TP53-208ENST00000504290 CASP2P42575 452 aa11.74□□□□□ -0.53
TP53-208ENST00000504290 PRIM2P49643 509 aa11.74□□□□□ -0.53
TP53-208ENST00000504290 CRYBB1P53674 252 aaPredicted RBP11.74□□□□□ -0.53
TP53-208ENST00000504290 RAPSNQ13702 412 aa11.74□□□□□ -0.53
TP53-208ENST00000504290 PTPRNQ16849 979 aa11.74□□□□□ -0.53
TP53-208ENST00000504290 C9orf57Q5W0N0 161 aa11.74□□□□□ -0.53
TP53-208ENST00000504290 CST9Q5W186 159 aa11.74□□□□□ -0.53
TP53-208ENST00000504290 GRAMD2AQ8IUY3 354 aa11.74□□□□□ -0.53
TP53-208ENST00000504290 SLC38A6Q8IZM9 456 aa11.74□□□□□ -0.53
TP53-208ENST00000504290 ANKRD49Q8WVL7 239 aa11.74□□□□□ -0.53
TP53-208ENST00000504290 DNAJB3Q8WWF6 145 aa11.74□□□□□ -0.53
TP53-208ENST00000504290 SLC9A7Q96T83 725 aa11.74□□□□□ -0.53
TP53-208ENST00000504290 MRPL45Q9BRJ2 306 aaKnown RBP11.74□□□□□ -0.53
TP53-208ENST00000504290 PRKD2Q9BZL6 878 aa11.74□□□□□ -0.53
TP53-208ENST00000504290 NUAK2Q9H093 628 aa11.74□□□□□ -0.53
TP53-208ENST00000504290 RUBCNLQ9H714 662 aa11.74□□□□□ -0.53
TP53-208ENST00000504290 TMPRSS4Q9NRS4 437 aa11.74□□□□□ -0.53
TP53-208ENST00000504290 PAQR5Q9NXK6 330 aaPredicted RBP11.74□□□□□ -0.53
TP53-208ENST00000504290 EHD3Q9NZN3 535 aa11.74□□□□□ -0.53
TP53-208ENST00000504290 ZIM2Q9NZV7 527 aa11.74□□□□□ -0.53
TP53-208ENST00000504290 CCDC59Q9P031 241 aaKnown RBP11.74□□□□□ -0.53
TP53-208ENST00000504290 UBA2Q9UBT2 640 aaPredicted RBP11.74□□□□□ -0.53
TP53-208ENST00000504290 NUDT5Q9UKK9 219 aa11.74□□□□□ -0.53
TP53-208ENST00000504290 SCN1AP35498 2009 aa11.73□□□□□ -0.53
TP53-208ENST00000504290 ZNF638Q14966 1978 aaKnown RBP11.73□□□□□ -0.53
TP53-208ENST00000504290 C17orf102A2RUQ5 167 aa11.73□□□□□ -0.53
TP53-208ENST00000504290 OR2A25A4D2G3 310 aa11.73□□□□□ -0.53
TP53-208ENST00000504290 LOC110117498-PIK3R3F6TDL0 507 aa11.73□□□□□ -0.53
TP53-208ENST00000504290 CAPN5O15484 640 aaPredicted RBP11.73□□□□□ -0.53
TP53-208ENST00000504290 TREHO43280 583 aa11.73□□□□□ -0.53
TP53-208ENST00000504290 JCHAINP01591 159 aa11.73□□□□□ -0.53
TP53-208ENST00000504290 MT-ND2P03891 347 aa11.73□□□□□ -0.53
TP53-208ENST00000504290 MAGP20916 626 aa11.73□□□□□ -0.53
TP53-208ENST00000504290 KCNC1P48547 511 aa11.73□□□□□ -0.53
TP53-208ENST00000504290 FOXA1P55317 472 aa11.73□□□□□ -0.53
TP53-208ENST00000504290 KEAP1Q14145 624 aa11.73□□□□□ -0.53
TP53-208ENST00000504290 CDONQ4KMG0 1287 aa11.73□□□□□ -0.53
TP53-208ENST00000504290 XKR4Q5GH76 650 aa11.73□□□□□ -0.53
TP53-208ENST00000504290 DMRTA1Q5VZB9 504 aa11.73□□□□□ -0.53
TP53-208ENST00000504290 FAM219BQ5XKK7 198 aa11.73□□□□□ -0.53
TP53-208ENST00000504290 BRICD5Q6PL45 260 aa11.73□□□□□ -0.53
TP53-208ENST00000504290 C17orf99Q6UX52 265 aa11.73□□□□□ -0.53
TP53-208ENST00000504290 SPATC1Q76KD6 591 aa11.73□□□□□ -0.53
TP53-208ENST00000504290 HIPK1Q86Z02 1210 aa11.73□□□□□ -0.53
TP53-208ENST00000504290 HS3ST5Q8IZT8 346 aa11.73□□□□□ -0.53
TP53-208ENST00000504290 ZNF540Q8NDQ6 660 aa11.73□□□□□ -0.53
TP53-208ENST00000504290 OR52E4Q8NGH9 312 aa11.73□□□□□ -0.53
TP53-208ENST00000504290 SETD6Q8TBK2 473 aa11.73□□□□□ -0.53
TP53-208ENST00000504290 IPCEF1Q8WWN9 437 aaPredicted RBP11.73□□□□□ -0.53
TP53-208ENST00000504290 PIK3R3Q92569 461 aa11.73□□□□□ -0.53
TP53-208ENST00000504290 FCGR1BQ92637 280 aa11.73□□□□□ -0.53
TP53-208ENST00000504290 TEX37Q96LM6 180 aa11.73□□□□□ -0.53
TP53-208ENST00000504290 NPY6RQ99463 290 aa11.73□□□□□ -0.53
TP53-208ENST00000504290 CCDC32Q9BV29 185 aa11.73□□□□□ -0.53
TP53-208ENST00000504290 GON7Q9BXV9 100 aa11.73□□□□□ -0.53
TP53-208ENST00000504290 ITPAQ9BY32 194 aa11.73□□□□□ -0.53
TP53-208ENST00000504290 RBCK1Q9BYM8 510 aa11.73□□□□□ -0.53
TP53-208ENST00000504290 RPRD1BQ9NQG5 326 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms