RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 TUBB2BQ9BVA1 445 aa11.64□□□□□ -0.55
MED28-203ENST00000503945 GPR87Q9BY21 358 aa11.64□□□□□ -0.55
MED28-203ENST00000503945 EPN3Q9H201 632 aa11.64□□□□□ -0.55
MED28-203ENST00000503945 MVB12BQ9H7P6 319 aa11.64□□□□□ -0.55
MED28-203ENST00000503945 COG4Q9H9E3 785 aa11.64□□□□□ -0.55
MED28-203ENST00000503945 LHX9Q9NQ69 397 aa11.64□□□□□ -0.55
MED28-203ENST00000503945 FGF21Q9NSA1 209 aa11.64□□□□□ -0.55
MED28-203ENST00000503945 PIH1D1Q9NWS0 290 aaKnown RBP11.64□□□□□ -0.55
MED28-203ENST00000503945 ANKMY1Q9P2S6 941 aa11.64□□□□□ -0.55
MED28-203ENST00000503945 TUBD1Q9UJT1 453 aa11.64□□□□□ -0.55
MED28-203ENST00000503945 CROTQ9UKG9 612 aa11.64□□□□□ -0.55
MED28-203ENST00000503945 IGLV3-16A0A075B6K0 115 aa11.63□□□□□ -0.55
MED28-203ENST00000503945 HEATR9A2RTY3 570 aa11.63□□□□□ -0.55
MED28-203ENST00000503945 GOLGA6L3A6NEY3 463 aa11.63□□□□□ -0.55
MED28-203ENST00000503945 LIASO43766 372 aa11.63□□□□□ -0.55
MED28-203ENST00000503945 RECKO95980 971 aa11.63□□□□□ -0.55
MED28-203ENST00000503945 KLK3P07288 261 aaPredicted RBP11.63□□□□□ -0.55
MED28-203ENST00000503945 EBLN1P0CF75 366 aa11.63□□□□□ -0.55
MED28-203ENST00000503945 CDH3P22223 829 aa11.63□□□□□ -0.55
MED28-203ENST00000503945 F8A1P23610 371 aa11.63□□□□□ -0.55
MED28-203ENST00000503945 ADRA1DP25100 572 aa11.63□□□□□ -0.55
MED28-203ENST00000503945 MSNP26038 577 aaKnown RBP11.63□□□□□ -0.55
MED28-203ENST00000503945 PLOD1Q02809 727 aaPredicted RBP11.63□□□□□ -0.55
MED28-203ENST00000503945 CDC20Q12834 499 aa11.63□□□□□ -0.55
MED28-203ENST00000503945 SNX1Q13596 522 aa11.63□□□□□ -0.55
MED28-203ENST00000503945 DUS1LQ6P1R4 473 aaKnown RBP11.63□□□□□ -0.55
MED28-203ENST00000503945 NLRP9Q7RTR0 991 aa11.63□□□□□ -0.55
MED28-203ENST00000503945 LILRA3Q8N6C8 439 aaPredicted RBP11.63□□□□□ -0.55
MED28-203ENST00000503945 CCDC89Q8N998 374 aa11.63□□□□□ -0.55
MED28-203ENST00000503945 C1orf54Q8WWF1 131 aa11.63□□□□□ -0.55
MED28-203ENST00000503945 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.63□□□□□ -0.55
MED28-203ENST00000503945 RMDN2Q96LZ7 410 aa11.63□□□□□ -0.55
MED28-203ENST00000503945 OR52A5Q9H2C5 316 aa11.63□□□□□ -0.55
MED28-203ENST00000503945 TFB2MQ9H5Q4 396 aaKnown RBP11.63□□□□□ -0.55
MED28-203ENST00000503945 SYTL2Q9HCH5 934 aa11.63□□□□□ -0.55
MED28-203ENST00000503945 ZNF71Q9NQZ8 489 aaPredicted RBP11.63□□□□□ -0.55
MED28-203ENST00000503945 C1GALT1Q9NS00 363 aa11.63□□□□□ -0.55
MED28-203ENST00000503945 SERTAD3Q9UJW9 196 aa11.63□□□□□ -0.55
MED28-203ENST00000503945 CAPN6Q9Y6Q1 641 aa11.63□□□□□ -0.55
MED28-203ENST00000503945 NBASA2RRP1 2371 aa11.63□□□□□ -0.55
MED28-203ENST00000503945 CCDC78A2IDD5 438 aa11.62□□□□□ -0.55
MED28-203ENST00000503945 GSAPA4D1B5 854 aa11.62□□□□□ -0.55
MED28-203ENST00000503945 SLC9B1P1A6NJY1 282 aa11.62□□□□□ -0.55
MED28-203ENST00000503945 LIN7AO14910 233 aaPredicted RBP11.62□□□□□ -0.55
MED28-203ENST00000503945 CREG1O75629 220 aa11.62□□□□□ -0.55
MED28-203ENST00000503945 SUN1O94901 812 aa11.62□□□□□ -0.55
MED28-203ENST00000503945 FTH1P02794 183 aa11.62□□□□□ -0.55
MED28-203ENST00000503945 OR56A5P0C7T3 313 aa11.62□□□□□ -0.55
MED28-203ENST00000503945 PSMA3P25788 255 aa11.62□□□□□ -0.55
MED28-203ENST00000503945 PDHA2P29803 388 aa11.62□□□□□ -0.55
MED28-203ENST00000503945 PRDX3P30048 256 aaKnown RBP11.62□□□□□ -0.55
MED28-203ENST00000503945 ARCN1P48444 511 aaKnown RBP11.62□□□□□ -0.55
MED28-203ENST00000503945 KPNA2P52292 529 aaKnown RBP11.62□□□□□ -0.55
MED28-203ENST00000503945 RPS15P62841 145 aaKnown RBP11.62□□□□□ -0.55
MED28-203ENST00000503945 FOXK1P85037 733 aa11.62□□□□□ -0.55
MED28-203ENST00000503945 PRKG2Q13237 762 aa11.62□□□□□ -0.55
MED28-203ENST00000503945 ITIH4Q14624 930 aa11.62□□□□□ -0.55
MED28-203ENST00000503945 OASLQ15646 514 aaKnown RBP11.62□□□□□ -0.55
MED28-203ENST00000503945 CCNG2Q16589 344 aa11.62□□□□□ -0.55
MED28-203ENST00000503945 DBN1Q16643 649 aa11.62□□□□□ -0.55
MED28-203ENST00000503945 CCDC38Q502W7 563 aa11.62□□□□□ -0.55
MED28-203ENST00000503945 MEI1Q5TIA1 1274 aa11.62□□□□□ -0.55
MED28-203ENST00000503945 CERS6Q6ZMG9 384 aa11.62□□□□□ -0.55
MED28-203ENST00000503945 HOOK3Q86VS8 718 aa11.62□□□□□ -0.55
MED28-203ENST00000503945 AMIGO1Q86WK6 493 aa11.62□□□□□ -0.55
MED28-203ENST00000503945 TMEM126BQ8IUX1 230 aa11.62□□□□□ -0.55
MED28-203ENST00000503945 PIANPQ8IYJ0 282 aa11.62□□□□□ -0.55
MED28-203ENST00000503945 OR6P1Q8NGX9 317 aa11.62□□□□□ -0.55
MED28-203ENST00000503945 ATG4AQ8WYN0 398 aa11.62□□□□□ -0.55
MED28-203ENST00000503945 SEC14L1Q92503 715 aa11.62□□□□□ -0.55
MED28-203ENST00000503945 HDAC10Q969S8 669 aa11.62□□□□□ -0.55
MED28-203ENST00000503945 TWSG1Q9GZX9 223 aa11.62□□□□□ -0.55
MED28-203ENST00000503945 FANCEQ9HB96 536 aa11.62□□□□□ -0.55
MED28-203ENST00000503945 RAB6BQ9NRW1 208 aa11.62□□□□□ -0.55
MED28-203ENST00000503945 SOHLH2Q9NX45 425 aa11.62□□□□□ -0.55
MED28-203ENST00000503945 POLG2Q9UHN1 485 aa11.62□□□□□ -0.55
MED28-203ENST00000503945 ANAPC5Q9UJX4 755 aa11.62□□□□□ -0.55
MED28-203ENST00000503945 DRG1Q9Y295 367 aaKnown RBP11.62□□□□□ -0.55
MED28-203ENST00000503945 PCDHGA6Q9Y5G7 932 aa11.62□□□□□ -0.55
MED28-203ENST00000503945 MRPS18BQ9Y676 258 aaKnown RBP11.62□□□□□ -0.55
MED28-203ENST00000503945 CCDC162PA2VCL2 907 aa11.61□□□□□ -0.55
MED28-203ENST00000503945 C2orf74A8MZ97 194 aa11.61□□□□□ -0.55
MED28-203ENST00000503945 C21orf140B9A014 251 aa11.61□□□□□ -0.55
MED28-203ENST00000503945 KDM1AO60341 852 aa11.61□□□□□ -0.55
MED28-203ENST00000503945 SCRG1O75711 98 aa11.61□□□□□ -0.55
MED28-203ENST00000503945 APRTP07741 180 aa11.61□□□□□ -0.55
MED28-203ENST00000503945 PRSS56P0CW18 603 aa11.61□□□□□ -0.55
MED28-203ENST00000503945 ETS1P14921 441 aa11.61□□□□□ -0.55
MED28-203ENST00000503945 OAS2P29728 719 aaKnown RBP11.61□□□□□ -0.55
MED28-203ENST00000503945 CASRP41180 1078 aa11.61□□□□□ -0.55
MED28-203ENST00000503945 PREPP48147 710 aa11.61□□□□□ -0.55
MED28-203ENST00000503945 DNASE1L3Q13609 305 aa11.61□□□□□ -0.55
MED28-203ENST00000503945 BRD3Q15059 726 aa11.61□□□□□ -0.55
MED28-203ENST00000503945 GPR19Q15760 415 aa11.61□□□□□ -0.55
MED28-203ENST00000503945 FAM199XQ6PEV8 388 aaPredicted RBP11.61□□□□□ -0.55
MED28-203ENST00000503945 C4orf22Q6V702 233 aa11.61□□□□□ -0.55
MED28-203ENST00000503945 GSTA5Q7RTV2 222 aa11.61□□□□□ -0.55
MED28-203ENST00000503945 OR4L1Q8NH43 312 aa11.61□□□□□ -0.55
MED28-203ENST00000503945 MAIP1Q8WWC4 291 aa11.61□□□□□ -0.55
MED28-203ENST00000503945 ELMO1Q92556 727 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms