RNA–Protein interactions for RNA: ENST00000502705.5

PTPN20-213, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 854 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-213ENST00000502705 VPS11Q9H270 941 aa4.7□□□□□ -1.66
PTPN20-213ENST00000502705 CNOT10Q9H9A5 744 aaKnown RBP4.7□□□□□ -1.66
PTPN20-213ENST00000502705 GP6Q9HCN6 339 aa4.7□□□□□ -1.66
PTPN20-213ENST00000502705 PCDH12Q9NPG4 1184 aa4.7□□□□□ -1.66
PTPN20-213ENST00000502705 MRGBPQ9NV56 204 aa4.7□□□□□ -1.66
PTPN20-213ENST00000502705 ZSCAN32Q9NX65 697 aa4.7□□□□□ -1.66
PTPN20-213ENST00000502705 NKIRAS1Q9NYS0 192 aa4.7□□□□□ -1.66
PTPN20-213ENST00000502705 ACTR10Q9NZ32 417 aa4.7□□□□□ -1.66
PTPN20-213ENST00000502705 VPS18Q9P253 973 aa4.7□□□□□ -1.66
PTPN20-213ENST00000502705 USP36Q9P275 1121 aaKnown RBP4.7□□□□□ -1.66
PTPN20-213ENST00000502705 MUTYHQ9UIF7 546 aa4.7□□□□□ -1.66
PTPN20-213ENST00000502705 GMEB2Q9UKD1 530 aa4.7□□□□□ -1.66
PTPN20-213ENST00000502705 PPT2Q9UMR5 302 aa4.7□□□□□ -1.66
PTPN20-213ENST00000502705 GPR34Q9UPC5 381 aa4.7□□□□□ -1.66
PTPN20-213ENST00000502705 CHMP2BQ9UQN3 213 aa4.7□□□□□ -1.66
PTPN20-213ENST00000502705 ANKRD6Q9Y2G4 727 aa4.7□□□□□ -1.66
PTPN20-213ENST00000502705 PCDHGA5Q9Y5G8 931 aa4.7□□□□□ -1.66
PTPN20-213ENST00000502705 FADS3Q9Y5Q0 445 aa4.7□□□□□ -1.66
PTPN20-213ENST00000502705 HS3ST3A1Q9Y663 406 aa4.7□□□□□ -1.66
PTPN20-213ENST00000502705 NUP210Q8TEM1 1887 aaPredicted RBP4.7□□□□□ -1.66
PTPN20-213ENST00000502705 MYO16Q9Y6X6 1858 aa4.7□□□□□ -1.66
PTPN20-213ENST00000502705 C17orf113A0A1B0GUU1 675 aa4.69□□□□□ -1.66
PTPN20-213ENST00000502705 FAM86C2PA6NEL3 165 aa4.69□□□□□ -1.66
PTPN20-213ENST00000502705 OR5K4A6NMS3 321 aa4.69□□□□□ -1.66
PTPN20-213ENST00000502705 GOLGA8MH3BSY2 632 aa4.69□□□□□ -1.66
PTPN20-213ENST00000502705 K7ERQ8 282 aa4.69□□□□□ -1.66
PTPN20-213ENST00000502705 PRMT5O14744 637 aaPredicted RBP4.69□□□□□ -1.66
PTPN20-213ENST00000502705 LIN7AO14910 233 aaPredicted RBP4.69□□□□□ -1.66
PTPN20-213ENST00000502705 SMAD7O15105 426 aaKnown RBP4.69□□□□□ -1.66
PTPN20-213ENST00000502705 KMOO15229 486 aa4.69□□□□□ -1.66
PTPN20-213ENST00000502705 MID1O15344 667 aa4.69□□□□□ -1.66
PTPN20-213ENST00000502705 CD3EAPO15446 510 aaKnown RBP4.69□□□□□ -1.66
PTPN20-213ENST00000502705 RIPK2O43353 540 aa4.69□□□□□ -1.66
PTPN20-213ENST00000502705 NARSO43776 548 aaKnown RBP4.69□□□□□ -1.66
PTPN20-213ENST00000502705 DNAJC6O75061 913 aa4.69□□□□□ -1.66
PTPN20-213ENST00000502705 TCEA3O75764 348 aa4.69□□□□□ -1.66
PTPN20-213ENST00000502705 SRP72O76094 671 aaKnown RBP4.69□□□□□ -1.66
PTPN20-213ENST00000502705 SLC25A14O95258 325 aaPredicted RBP4.69□□□□□ -1.66
PTPN20-213ENST00000502705 VAPBO95292 243 aa4.69□□□□□ -1.66
PTPN20-213ENST00000502705 PIGNO95427 931 aa4.69□□□□□ -1.66
PTPN20-213ENST00000502705 CER1O95813 267 aa4.69□□□□□ -1.66
PTPN20-213ENST00000502705 MT-CO1P00395 513 aa4.69□□□□□ -1.66
PTPN20-213ENST00000502705 AGTP01019 485 aa4.69□□□□□ -1.66
PTPN20-213ENST00000502705 SLC4A1P02730 911 aa4.69□□□□□ -1.66
PTPN20-213ENST00000502705 MT-ND3P03897 115 aa4.69□□□□□ -1.66
PTPN20-213ENST00000502705 CD3EP07766 207 aa4.69□□□□□ -1.66
PTPN20-213ENST00000502705 ZSCAN5DPP0CG00 497 aa4.69□□□□□ -1.66
PTPN20-213ENST00000502705 NEFHP12036 1026 aa4.69□□□□□ -1.66
PTPN20-213ENST00000502705 MYCLP1P12525 358 aaPredicted RBP4.69□□□□□ -1.66
PTPN20-213ENST00000502705 STMN1P16949 149 aa4.69□□□□□ -1.66
PTPN20-213ENST00000502705 CD247P20963 164 aa4.69□□□□□ -1.66
PTPN20-213ENST00000502705 CD9P21926 228 aa4.69□□□□□ -1.66
PTPN20-213ENST00000502705 RPS3P23396 243 aaKnown RBP eCLIP4.69□□□□□ -1.66
PTPN20-213ENST00000502705 DGKAP23743 735 aa4.69□□□□□ -1.66
PTPN20-213ENST00000502705 CD27P26842 260 aa4.69□□□□□ -1.66
PTPN20-213ENST00000502705 MC4RP32245 332 aa4.69□□□□□ -1.66
PTPN20-213ENST00000502705 HPDP32754 393 aaPredicted RBP4.69□□□□□ -1.66
PTPN20-213ENST00000502705 HNF1BP35680 557 aa4.69□□□□□ -1.66
PTPN20-213ENST00000502705 HSD17B2P37059 387 aa4.69□□□□□ -1.66
PTPN20-213ENST00000502705 MAGEA3P43357 314 aa4.69□□□□□ -1.66
PTPN20-213ENST00000502705 SPINT3P49223 89 aa4.69□□□□□ -1.66
PTPN20-213ENST00000502705 CARSP49589 748 aaKnown RBP4.69□□□□□ -1.66
PTPN20-213ENST00000502705 TPMTP51580 245 aa4.69□□□□□ -1.66
PTPN20-213ENST00000502705 STC1P52823 247 aa4.69□□□□□ -1.66
PTPN20-213ENST00000502705 ATXN3P54252 364 aaPredicted RBP4.69□□□□□ -1.66
PTPN20-213ENST00000502705 ADPRHP54922 357 aa4.69□□□□□ -1.66
PTPN20-213ENST00000502705 KIAA1024LP59773 190 aa4.69□□□□□ -1.66
PTPN20-213ENST00000502705 HNRNPKP61978 463 aaKnown RBP eCLIP4.69□□□□□ -1.66
PTPN20-213ENST00000502705 VSNL1P62760 191 aa4.69□□□□□ -1.66
PTPN20-213ENST00000502705 CREB5Q02930 508 aa4.69□□□□□ -1.66
PTPN20-213ENST00000502705 ACVR1Q04771 509 aa4.69□□□□□ -1.66
PTPN20-213ENST00000502705 NIPAL4Q0D2K0 466 aa4.69□□□□□ -1.66
PTPN20-213ENST00000502705 ILF3Q12906 894 aaKnown RBP eCLIP4.69□□□□□ -1.66
PTPN20-213ENST00000502705 TRAF2Q12933 501 aa4.69□□□□□ -1.66
PTPN20-213ENST00000502705 RPA4Q13156 261 aa4.69□□□□□ -1.66
PTPN20-213ENST00000502705 NFATC2Q13469 925 aa4.69□□□□□ -1.66
PTPN20-213ENST00000502705 GALNT3Q14435 633 aa4.69□□□□□ -1.66
PTPN20-213ENST00000502705 KRT33BQ14525 404 aa4.69□□□□□ -1.66
PTPN20-213ENST00000502705 FAXCQ5TGI0 409 aa4.69□□□□□ -1.66
PTPN20-213ENST00000502705 AGAP9Q5VTM2 703 aa4.69□□□□□ -1.66
PTPN20-213ENST00000502705 LYSMD4Q5XG99 296 aa4.69□□□□□ -1.66
PTPN20-213ENST00000502705 STEAP4Q687X5 459 aa4.69□□□□□ -1.66
PTPN20-213ENST00000502705 LRRC66Q68CR7 880 aa4.69□□□□□ -1.66
PTPN20-213ENST00000502705 TMEM215Q68D42 235 aa4.69□□□□□ -1.66
PTPN20-213ENST00000502705 ANO7Q6IWH7 933 aa4.69□□□□□ -1.66
PTPN20-213ENST00000502705 ESRP1Q6NXG1 681 aaKnown RBP4.69□□□□□ -1.66
PTPN20-213ENST00000502705 KLHL35Q6PF15 583 aa4.69□□□□□ -1.66
PTPN20-213ENST00000502705 KYAT3Q6YP21 454 aaKnown RBP4.69□□□□□ -1.66
PTPN20-213ENST00000502705 LEKR1Q6ZMV7 388 aa4.69□□□□□ -1.66
PTPN20-213ENST00000502705 CCDC81Q6ZN84 652 aa4.69□□□□□ -1.66
PTPN20-213ENST00000502705 MICALCLQ6ZW33 695 aa4.69□□□□□ -1.66
PTPN20-213ENST00000502705 RAPH1Q70E73 1250 aa4.69□□□□□ -1.66
PTPN20-213ENST00000502705 MARK2Q7KZI7 788 aaKnown RBP4.69□□□□□ -1.66
PTPN20-213ENST00000502705 PARS2Q7L3T8 475 aaKnown RBP4.69□□□□□ -1.66
PTPN20-213ENST00000502705 KDELC2Q7Z4H8 507 aa4.69□□□□□ -1.66
PTPN20-213ENST00000502705 TDRPQ86YL5 185 aa4.69□□□□□ -1.66
PTPN20-213ENST00000502705 CPNE8Q86YQ8 564 aa4.69□□□□□ -1.66
PTPN20-213ENST00000502705 Q8N1X5 172 aa4.69□□□□□ -1.66
PTPN20-213ENST00000502705 FSTL5Q8N475 847 aaPredicted RBP4.69□□□□□ -1.66
PTPN20-213ENST00000502705 CHCHD4Q8N4Q1 142 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms