RNA–Protein interactions for RNA: ENST00000502479.1

LINC00939-201, long intergenic non-protein coding RNA 939, humanhuman

TSL 1 (best) BASIC

Gene LINC00939, Length 4,972 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00939-201ENST00000502479 WDR12Q9GZL7 423 aaKnown RBP6.33□□□□□ -1.4
LINC00939-201ENST00000502479 HIPK3Q9H422 1215 aa6.33□□□□□ -1.4
LINC00939-201ENST00000502479 FAM120CQ9NX05 1096 aaKnown RBP6.33□□□□□ -1.4
LINC00939-201ENST00000502479 ARL15Q9NXU5 204 aa6.33□□□□□ -1.4
LINC00939-201ENST00000502479 EIF2B4Q9UI10 523 aaKnown RBP6.33□□□□□ -1.4
LINC00939-201ENST00000502479 PCDHGB4Q9UN71 923 aa6.33□□□□□ -1.4
LINC00939-201ENST00000502479 NYNRINQ9P2P1 1898 aaKnown RBP6.33□□□□□ -1.4
LINC00939-201ENST00000502479 PSMD11O00231 422 aa6.33□□□□□ -1.4
LINC00939-201ENST00000502479 CXCR6O00574 342 aa6.33□□□□□ -1.4
LINC00939-201ENST00000502479 KRT75O95678 551 aa6.33□□□□□ -1.4
LINC00939-201ENST00000502479 CST1P01037 141 aa6.33□□□□□ -1.4
LINC00939-201ENST00000502479 CXCL10P02778 98 aa6.33□□□□□ -1.4
LINC00939-201ENST00000502479 FABP3P05413 133 aa6.33□□□□□ -1.4
LINC00939-201ENST00000502479 MTHFRP42898 656 aa6.33□□□□□ -1.4
LINC00939-201ENST00000502479 GSK3BP49841 420 aa6.33□□□□□ -1.4
LINC00939-201ENST00000502479 MVKQ03426 396 aa6.33□□□□□ -1.4
LINC00939-201ENST00000502479 NRF1Q16656 503 aa6.33□□□□□ -1.4
LINC00939-201ENST00000502479 MYLK3Q32MK0 819 aa6.33□□□□□ -1.4
LINC00939-201ENST00000502479 IYDQ6PHW0 289 aa6.33□□□□□ -1.4
LINC00939-201ENST00000502479 FAM217AQ8IXS0 508 aa6.33□□□□□ -1.4
LINC00939-201ENST00000502479 MICU2Q8IYU8 434 aa6.33□□□□□ -1.4
LINC00939-201ENST00000502479 CFAP52Q8N1V2 620 aa6.33□□□□□ -1.4
LINC00939-201ENST00000502479 NR4A3Q92570 626 aa6.33□□□□□ -1.4
LINC00939-201ENST00000502479 REXO5Q96IC2 774 aaKnown RBP6.33□□□□□ -1.4
LINC00939-201ENST00000502479 THUMPD1Q9NXG2 353 aaKnown RBP6.33□□□□□ -1.4
LINC00939-201ENST00000502479 ZNF282Q9UDV7 671 aaPredicted RBP6.33□□□□□ -1.4
LINC00939-201ENST00000502479 FADS3Q9Y5Q0 445 aa6.33□□□□□ -1.4
LINC00939-201ENST00000502479 INSL5Q9Y5Q6 135 aa6.33□□□□□ -1.4
LINC00939-201ENST00000502479 ATG13O75143 517 aa6.33□□□□□ -1.4
LINC00939-201ENST00000502479 CAPN1P07384 714 aa6.33□□□□□ -1.4
LINC00939-201ENST00000502479 HDCP19113 662 aa6.33□□□□□ -1.4
LINC00939-201ENST00000502479 CCR10P46092 362 aa6.33□□□□□ -1.4
LINC00939-201ENST00000502479 DCDC1P59894 354 aa6.33□□□□□ -1.4
LINC00939-201ENST00000502479 DUOXA1Q1HG43 343 aa6.33□□□□□ -1.4
LINC00939-201ENST00000502479 PGS1Q32NB8 556 aa6.33□□□□□ -1.4
LINC00939-201ENST00000502479 NADK2Q4G0N4 442 aa6.33□□□□□ -1.4
LINC00939-201ENST00000502479 ZNF773Q6PK81 442 aa6.33□□□□□ -1.4
LINC00939-201ENST00000502479 FAM151BQ6UXP7 276 aa6.33□□□□□ -1.4
LINC00939-201ENST00000502479 CYP4Z1Q86W10 505 aa6.33□□□□□ -1.4
LINC00939-201ENST00000502479 SLC15A3Q8IY34 581 aa6.33□□□□□ -1.4
LINC00939-201ENST00000502479 ZCCHC7Q8N3Z6 543 aaKnown RBP6.33□□□□□ -1.4
LINC00939-201ENST00000502479 DDHD1Q8NEL9 900 aa6.33□□□□□ -1.4
LINC00939-201ENST00000502479 OR4F6Q8NGB9 312 aa6.33□□□□□ -1.4
LINC00939-201ENST00000502479 OR2AP1Q8NGE2 309 aa6.33□□□□□ -1.4
LINC00939-201ENST00000502479 PPP1R13LQ8WUF5 828 aa6.33□□□□□ -1.4
LINC00939-201ENST00000502479 TFAP2CQ92754 450 aa6.33□□□□□ -1.4
LINC00939-201ENST00000502479 CLP1Q92989 425 aaKnown RBP6.33□□□□□ -1.4
LINC00939-201ENST00000502479 TESCQ96BS2 214 aa6.33□□□□□ -1.4
LINC00939-201ENST00000502479 GABARAPL1Q9H0R8 117 aa6.33□□□□□ -1.4
LINC00939-201ENST00000502479 RUVBL1Q9Y265 456 aaKnown RBP6.33□□□□□ -1.4
LINC00939-201ENST00000502479 OR51F1A6NGY5 319 aa6.32□□□□□ -1.4
LINC00939-201ENST00000502479 ATP6V1B1P15313 513 aa6.32□□□□□ -1.4
LINC00939-201ENST00000502479 ATF6P18850 670 aa6.32□□□□□ -1.4
LINC00939-201ENST00000502479 PRPS1L1P21108 318 aa6.32□□□□□ -1.4
LINC00939-201ENST00000502479 HOXD9P28356 352 aaPredicted RBP6.32□□□□□ -1.4
LINC00939-201ENST00000502479 HNF4AP41235 474 aa6.32□□□□□ -1.4
LINC00939-201ENST00000502479 PIK3CBP42338 1070 aa6.32□□□□□ -1.4
LINC00939-201ENST00000502479 ARSDP51689 593 aa6.32□□□□□ -1.4
LINC00939-201ENST00000502479 CLCN7P51798 805 aa6.32□□□□□ -1.4
LINC00939-201ENST00000502479 RPS14P62263 151 aaKnown RBP6.32□□□□□ -1.4
LINC00939-201ENST00000502479 ELP6Q0PNE2 266 aa6.32□□□□□ -1.4
LINC00939-201ENST00000502479 SKIV2LQ15477 1246 aaKnown RBP6.32□□□□□ -1.4
LINC00939-201ENST00000502479 DGUOKQ16854 277 aa6.32□□□□□ -1.4
LINC00939-201ENST00000502479 HABP4Q5JVS0 413 aaKnown RBP6.32□□□□□ -1.4
LINC00939-201ENST00000502479 C6orf136Q5SQH8 315 aa6.32□□□□□ -1.4
LINC00939-201ENST00000502479 FBXL19Q6PCT2 694 aa6.32□□□□□ -1.4
LINC00939-201ENST00000502479 ZC3H7AQ8IWR0 971 aaKnown RBP6.32□□□□□ -1.4
LINC00939-201ENST00000502479 EFCAB3Q8N7B9 438 aa6.32□□□□□ -1.4
LINC00939-201ENST00000502479 ACVR1CQ8NER5 493 aa6.32□□□□□ -1.4
LINC00939-201ENST00000502479 RAB2BQ8WUD1 216 aa6.32□□□□□ -1.4
LINC00939-201ENST00000502479 BIRC7Q96CA5 298 aa6.32□□□□□ -1.4
LINC00939-201ENST00000502479 NSMCE3Q96MG7 304 aa6.32□□□□□ -1.4
LINC00939-201ENST00000502479 ZNF556Q9HAH1 456 aa6.32□□□□□ -1.4
LINC00939-201ENST00000502479 WBP11Q9Y2W2 641 aaKnown RBP6.32□□□□□ -1.4
LINC00939-201ENST00000502479 PTPRDP23468 1912 aa6.32□□□□□ -1.4
LINC00939-201ENST00000502479 MCM3APO60318 1980 aa6.32□□□□□ -1.4
LINC00939-201ENST00000502479 A0A0D9SEW6 157 aa6.32□□□□□ -1.4
LINC00939-201ENST00000502479 EIF4E1BA6NMX2 242 aaKnown RBP6.32□□□□□ -1.4
LINC00939-201ENST00000502479 HNRNPCL2B2RXH8 293 aa6.32□□□□□ -1.4
LINC00939-201ENST00000502479 E2F3O00716 465 aa6.32□□□□□ -1.4
LINC00939-201ENST00000502479 CBFA2T3O75081 653 aa6.32□□□□□ -1.4
LINC00939-201ENST00000502479 CATP04040 527 aaKnown RBP6.32□□□□□ -1.4
LINC00939-201ENST00000502479 ITGB1P05556 798 aa6.32□□□□□ -1.4
LINC00939-201ENST00000502479 CCDC159P0C7I6 412 aa6.32□□□□□ -1.4
LINC00939-201ENST00000502479 ATP1B2P14415 290 aaPredicted RBP6.32□□□□□ -1.4
LINC00939-201ENST00000502479 ZNF12P17014 697 aa6.32□□□□□ -1.4
LINC00939-201ENST00000502479 ARRB2P32121 409 aa6.32□□□□□ -1.4
LINC00939-201ENST00000502479 VASPP50552 380 aaPredicted RBP6.32□□□□□ -1.4
LINC00939-201ENST00000502479 KCNQ1P51787 676 aa6.32□□□□□ -1.4
LINC00939-201ENST00000502479 PPP1R3AQ16821 1122 aa6.32□□□□□ -1.4
LINC00939-201ENST00000502479 TRIM46Q7Z4K8 759 aa6.32□□□□□ -1.4
LINC00939-201ENST00000502479 CTU1Q7Z7A3 348 aaKnown RBP6.32□□□□□ -1.4
LINC00939-201ENST00000502479 GPR180Q86V85 440 aa6.32□□□□□ -1.4
LINC00939-201ENST00000502479 TRIM69Q86WT6 500 aa6.32□□□□□ -1.4
LINC00939-201ENST00000502479 SYT12Q8IV01 421 aa6.32□□□□□ -1.4
LINC00939-201ENST00000502479 CPNE9Q8IYJ1 553 aa6.32□□□□□ -1.4
LINC00939-201ENST00000502479 DEPDC4Q8N2C3 294 aa6.32□□□□□ -1.4
LINC00939-201ENST00000502479 NXPE1Q8N323 547 aa6.32□□□□□ -1.4
LINC00939-201ENST00000502479 CBR4Q8N4T8 237 aa6.32□□□□□ -1.4
LINC00939-201ENST00000502479 TMCO5AQ8N6Q1 288 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms