RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 OPTCQ9UBM4 332 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 ZC3H7BQ9UGR2 993 aaKnown RBP5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 ST3GAL5Q9UNP4 418 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 TCRBV3S1A0A5B6 114 aa5.69□□□□□ -1.5
SOX2-OT-218ENST00000498731 ZNF98A6NK75 572 aa5.69□□□□□ -1.5
SOX2-OT-218ENST00000498731 TPP1O14773 563 aa5.69□□□□□ -1.5
SOX2-OT-218ENST00000498731 DNAJB5O75953 348 aa5.69□□□□□ -1.5
SOX2-OT-218ENST00000498731 FGF18O76093 207 aa5.69□□□□□ -1.5
SOX2-OT-218ENST00000498731 B3GAT3O94766 335 aa5.69□□□□□ -1.5
SOX2-OT-218ENST00000498731 HSPA4LO95757 839 aa5.69□□□□□ -1.5
SOX2-OT-218ENST00000498731 ASGR1P07306 291 aa5.69□□□□□ -1.5
SOX2-OT-218ENST00000498731 ZNF865P0CJ78 1059 aaPredicted RBP5.69□□□□□ -1.5
SOX2-OT-218ENST00000498731 PF4V1P10720 104 aa5.69□□□□□ -1.5
SOX2-OT-218ENST00000498731 ATF6P18850 670 aa5.69□□□□□ -1.5
SOX2-OT-218ENST00000498731 MSH3P20585 1137 aa5.69□□□□□ -1.5
SOX2-OT-218ENST00000498731 PCMT1P22061 227 aa5.69□□□□□ -1.5
SOX2-OT-218ENST00000498731 IGFBP6P24592 240 aaPredicted RBP5.69□□□□□ -1.5
SOX2-OT-218ENST00000498731 CCND3P30281 292 aaPredicted RBP5.69□□□□□ -1.5
SOX2-OT-218ENST00000498731 HOXC12P31275 282 aa5.69□□□□□ -1.5
SOX2-OT-218ENST00000498731 CD52P31358 61 aa5.69□□□□□ -1.5
SOX2-OT-218ENST00000498731 RFX2P48378 723 aa5.69□□□□□ -1.5
SOX2-OT-218ENST00000498731 AFF1P51825 1210 aaKnown RBP5.69□□□□□ -1.5
SOX2-OT-218ENST00000498731 GJA9P57773 515 aa5.69□□□□□ -1.5
SOX2-OT-218ENST00000498731 ERVK-21P61565 698 aa5.69□□□□□ -1.5
SOX2-OT-218ENST00000498731 POU4F3Q15319 338 aa5.69□□□□□ -1.5
SOX2-OT-218ENST00000498731 TCEA2Q15560 299 aa5.69□□□□□ -1.5
SOX2-OT-218ENST00000498731 CES3Q6UWW8 571 aa5.69□□□□□ -1.5
SOX2-OT-218ENST00000498731 ARSKQ6UWY0 536 aa5.69□□□□□ -1.5
SOX2-OT-218ENST00000498731 ABRAXAS1Q6UWZ7 409 aa5.69□□□□□ -1.5
SOX2-OT-218ENST00000498731 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.69□□□□□ -1.5
SOX2-OT-218ENST00000498731 VN1R5Q7Z5H4 357 aa5.69□□□□□ -1.5
SOX2-OT-218ENST00000498731 LINC00523Q86TU6 105 aa5.69□□□□□ -1.5
SOX2-OT-218ENST00000498731 CEP97Q8IW35 865 aa5.69□□□□□ -1.5
SOX2-OT-218ENST00000498731 SLC7A14Q8TBB6 771 aa5.69□□□□□ -1.5
SOX2-OT-218ENST00000498731 ACTL9Q8TC94 416 aa5.69□□□□□ -1.5
SOX2-OT-218ENST00000498731 FAR1Q8WVX9 515 aa5.69□□□□□ -1.5
SOX2-OT-218ENST00000498731 NXNL1Q96CM4 212 aa5.69□□□□□ -1.5
SOX2-OT-218ENST00000498731 REXO5Q96IC2 774 aaKnown RBP5.69□□□□□ -1.5
SOX2-OT-218ENST00000498731 FAM129BQ96TA1 746 aa5.69□□□□□ -1.5
SOX2-OT-218ENST00000498731 SAV1Q9H4B6 383 aaPredicted RBP5.69□□□□□ -1.5
SOX2-OT-218ENST00000498731 DHX35Q9H5Z1 703 aaKnown RBP5.69□□□□□ -1.5
SOX2-OT-218ENST00000498731 ASB7Q9H672 318 aa5.69□□□□□ -1.5
SOX2-OT-218ENST00000498731 FBXO8Q9NRD0 319 aa5.69□□□□□ -1.5
SOX2-OT-218ENST00000498731 SNX15Q9NRS6 342 aa5.69□□□□□ -1.5
SOX2-OT-218ENST00000498731 SEPT10Q9P0V9 454 aa5.69□□□□□ -1.5
SOX2-OT-218ENST00000498731 FAM8A1Q9UBU6 413 aa5.69□□□□□ -1.5
SOX2-OT-218ENST00000498731 TEKT2Q9UIF3 430 aa5.69□□□□□ -1.5
SOX2-OT-218ENST00000498731 PRG3Q9Y2Y8 225 aaPredicted RBP5.69□□□□□ -1.5
SOX2-OT-218ENST00000498731 COPG1Q9Y678 874 aaKnown RBP5.69□□□□□ -1.5
SOX2-OT-218ENST00000498731 CHD5Q8TDI0 1954 aa5.69□□□□□ -1.5
SOX2-OT-218ENST00000498731 SMIM28A0A1B0GU29 152 aa5.69□□□□□ -1.5
SOX2-OT-218ENST00000498731 A0A1B0GVC2 190 aa5.69□□□□□ -1.5
SOX2-OT-218ENST00000498731 SAGE2PA6NJ88 616 aa5.69□□□□□ -1.5
SOX2-OT-218ENST00000498731 WWP2O00308 870 aa5.69□□□□□ -1.5
SOX2-OT-218ENST00000498731 OR5F1O95221 314 aa5.69□□□□□ -1.5
SOX2-OT-218ENST00000498731 SYN1P17600 705 aa5.69□□□□□ -1.5
SOX2-OT-218ENST00000498731 CRHBPP24387 322 aa5.69□□□□□ -1.5
SOX2-OT-218ENST00000498731 PRIM2P49643 509 aa5.69□□□□□ -1.5
SOX2-OT-218ENST00000498731 MAP2K6P52564 334 aa5.69□□□□□ -1.5
SOX2-OT-218ENST00000498731 PPP5CP53041 499 aa5.69□□□□□ -1.5
SOX2-OT-218ENST00000498731 ARFIP1P53367 373 aa5.69□□□□□ -1.5
SOX2-OT-218ENST00000498731 PSME3P61289 254 aa5.69□□□□□ -1.5
SOX2-OT-218ENST00000498731 PRKG2Q13237 762 aa5.69□□□□□ -1.5
SOX2-OT-218ENST00000498731 SELPLGQ14242 412 aa5.69□□□□□ -1.5
SOX2-OT-218ENST00000498731 FBXO47Q5MNV8 452 aa5.69□□□□□ -1.5
SOX2-OT-218ENST00000498731 STXBP5Q5T5C0 1151 aa5.69□□□□□ -1.5
SOX2-OT-218ENST00000498731 DARS2Q6PI48 645 aaKnown RBP5.69□□□□□ -1.5
SOX2-OT-218ENST00000498731 NUP54Q7Z3B4 507 aa5.69□□□□□ -1.5
SOX2-OT-218ENST00000498731 NOXA1Q86UR1 476 aa5.69□□□□□ -1.5
SOX2-OT-218ENST00000498731 PGAM4Q8N0Y7 254 aa5.69□□□□□ -1.5
SOX2-OT-218ENST00000498731 PARP16Q8N5Y8 322 aa5.69□□□□□ -1.5
SOX2-OT-218ENST00000498731 SLC2A14Q8TDB8 520 aa5.69□□□□□ -1.5
SOX2-OT-218ENST00000498731 DEDD2Q8WXF8 326 aa5.69□□□□□ -1.5
SOX2-OT-218ENST00000498731 SIPA1Q96FS4 1042 aa5.69□□□□□ -1.5
SOX2-OT-218ENST00000498731 PIWIL1Q96J94 861 aaKnown RBP5.69□□□□□ -1.5
SOX2-OT-218ENST00000498731 BTN2A3PQ96KV6 586 aa5.69□□□□□ -1.5
SOX2-OT-218ENST00000498731 KLHL15Q96M94 604 aa5.69□□□□□ -1.5
SOX2-OT-218ENST00000498731 RBM14Q96PK6 669 aaKnown RBP5.69□□□□□ -1.5
SOX2-OT-218ENST00000498731 ACOX2Q99424 681 aa5.69□□□□□ -1.5
SOX2-OT-218ENST00000498731 SPON2Q9BUD6 331 aa5.69□□□□□ -1.5
SOX2-OT-218ENST00000498731 IFT22Q9H7X7 185 aa5.69□□□□□ -1.5
SOX2-OT-218ENST00000498731 TCF7L2Q9NQB0 619 aa5.69□□□□□ -1.5
SOX2-OT-218ENST00000498731 TRMT13Q9NUP7 481 aaKnown RBP5.69□□□□□ -1.5
SOX2-OT-218ENST00000498731 POLR3BQ9NW08 1133 aaPredicted RBP5.69□□□□□ -1.5
SOX2-OT-218ENST00000498731 UTS2RQ9UKP6 389 aa5.69□□□□□ -1.5
SOX2-OT-218ENST00000498731 FIS1Q9Y3D6 152 aa5.69□□□□□ -1.5
SOX2-OT-218ENST00000498731 RAD54BQ9Y620 910 aa5.69□□□□□ -1.5
SOX2-OT-218ENST00000498731 KPNA7A9QM74 516 aa5.68□□□□□ -1.5
SOX2-OT-218ENST00000498731 AREL1O15033 823 aa5.68□□□□□ -1.5
SOX2-OT-218ENST00000498731 TRIM24O15164 1050 aa5.68□□□□□ -1.5
SOX2-OT-218ENST00000498731 KPNA6O60684 536 aa5.68□□□□□ -1.5
SOX2-OT-218ENST00000498731 ZNF623O75123 536 aa5.68□□□□□ -1.5
SOX2-OT-218ENST00000498731 PRKD3O94806 890 aa5.68□□□□□ -1.5
SOX2-OT-218ENST00000498731 EPOP01588 193 aa5.68□□□□□ -1.5
SOX2-OT-218ENST00000498731 CTGFP29279 349 aa5.68□□□□□ -1.5
SOX2-OT-218ENST00000498731 HOXA11P31270 313 aaPredicted RBP5.68□□□□□ -1.5
SOX2-OT-218ENST00000498731 SDC4P31431 198 aa5.68□□□□□ -1.5
SOX2-OT-218ENST00000498731 GRK5P34947 590 aa5.68□□□□□ -1.5
SOX2-OT-218ENST00000498731 RPIAP49247 311 aa5.68□□□□□ -1.5
SOX2-OT-218ENST00000498731 MAPK12P53778 367 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms