RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 ADAMDEC1O15204 470 aa3.07□□□□□ -1.92
PSPC1-205ENST00000497722 P4HA2O15460 535 aa3.07□□□□□ -1.92
PSPC1-205ENST00000497722 DIAPH2O60879 1101 aa3.07□□□□□ -1.92
PSPC1-205ENST00000497722 ERAL1O75616 437 aaKnown RBP3.07□□□□□ -1.92
PSPC1-205ENST00000497722 TRUB2O95900 331 aaKnown RBP3.07□□□□□ -1.92
PSPC1-205ENST00000497722 CFC1BP0CG36 223 aa3.07□□□□□ -1.92
PSPC1-205ENST00000497722 CFC1P0CG37 223 aa3.07□□□□□ -1.92
PSPC1-205ENST00000497722 PFKFB1P16118 471 aa3.07□□□□□ -1.92
PSPC1-205ENST00000497722 MARK3P27448 753 aa3.07□□□□□ -1.92
PSPC1-205ENST00000497722 CRIP2P52943 208 aaPredicted RBP3.07□□□□□ -1.92
PSPC1-205ENST00000497722 KCNJ10P78508 379 aa3.07□□□□□ -1.92
PSPC1-205ENST00000497722 IFI35P80217 286 aaPredicted RBP3.07□□□□□ -1.92
PSPC1-205ENST00000497722 CDK3Q00526 305 aa3.07□□□□□ -1.92
PSPC1-205ENST00000497722 HSPB3Q12988 150 aa3.07□□□□□ -1.92
PSPC1-205ENST00000497722 DMP1Q13316 513 aaPredicted RBP3.07□□□□□ -1.92
PSPC1-205ENST00000497722 MFAP5Q13361 173 aa3.07□□□□□ -1.92
PSPC1-205ENST00000497722 BECN1Q14457 450 aa3.07□□□□□ -1.92
PSPC1-205ENST00000497722 KIR2DS3Q14952 304 aa3.07□□□□□ -1.92
PSPC1-205ENST00000497722 NR1D2Q14995 579 aa3.07□□□□□ -1.92
PSPC1-205ENST00000497722 TAF13Q15543 124 aa3.07□□□□□ -1.92
PSPC1-205ENST00000497722 C9orf152Q5JTZ5 239 aa3.07□□□□□ -1.92
PSPC1-205ENST00000497722 CCNYL2Q5T2Q4 361 aa3.07□□□□□ -1.92
PSPC1-205ENST00000497722 FIGLAQ6QHK4 219 aa3.07□□□□□ -1.92
PSPC1-205ENST00000497722 C19orf48Q6RUI8 117 aa3.07□□□□□ -1.92
PSPC1-205ENST00000497722 CEACAM20Q6UY09 585 aa3.07□□□□□ -1.92
PSPC1-205ENST00000497722 DENND5BQ6ZUT9 1274 aa3.07□□□□□ -1.92
PSPC1-205ENST00000497722 DGLUCYQ7Z3D6 616 aa3.07□□□□□ -1.92
PSPC1-205ENST00000497722 COMMD2Q86X83 199 aa3.07□□□□□ -1.92
PSPC1-205ENST00000497722 CIARTQ8N365 385 aaPredicted RBP3.07□□□□□ -1.92
PSPC1-205ENST00000497722 STPG4Q8N801 248 aa3.07□□□□□ -1.92
PSPC1-205ENST00000497722 PTPMT1Q8WUK0 201 aaPredicted RBP3.07□□□□□ -1.92
PSPC1-205ENST00000497722 TEKT4Q8WW24 435 aa3.07□□□□□ -1.92
PSPC1-205ENST00000497722 SPACA9Q96E40 222 aaPredicted RBP3.07□□□□□ -1.92
PSPC1-205ENST00000497722 FBXO17Q96EF6 278 aa3.07□□□□□ -1.92
PSPC1-205ENST00000497722 SFXN2Q96NB2 322 aa3.07□□□□□ -1.92
PSPC1-205ENST00000497722 SLX1AQ9BQ83 275 aa3.07□□□□□ -1.92
PSPC1-205ENST00000497722 RHNO1Q9BSD3 238 aa3.07□□□□□ -1.92
PSPC1-205ENST00000497722 SLA2Q9H6Q3 261 aa3.07□□□□□ -1.92
PSPC1-205ENST00000497722 ZBTB20Q9HC78 741 aaPredicted RBP3.07□□□□□ -1.92
PSPC1-205ENST00000497722 BCCIPQ9P287 314 aaKnown RBP eCLIP3.07□□□□□ -1.92
PSPC1-205ENST00000497722 TRPV2Q9Y5S1 764 aa3.07□□□□□ -1.92
PSPC1-205ENST00000497722 LOC102723996A0A087X1L8 192 aa3.06□□□□□ -1.92
PSPC1-205ENST00000497722 PLOD2O00469 737 aa3.06□□□□□ -1.92
PSPC1-205ENST00000497722 SH2B2O14492 632 aaPredicted RBP3.06□□□□□ -1.92
PSPC1-205ENST00000497722 TCERG1O14776 1098 aaKnown RBP3.06□□□□□ -1.92
PSPC1-205ENST00000497722 TO15178 435 aa3.06□□□□□ -1.92
PSPC1-205ENST00000497722 MSH3P20585 1137 aa3.06□□□□□ -1.92
PSPC1-205ENST00000497722 CBLP22681 906 aa3.06□□□□□ -1.92
PSPC1-205ENST00000497722 CDH13P55290 713 aa3.06□□□□□ -1.92
PSPC1-205ENST00000497722 TPD52P55327 224 aaPredicted RBP3.06□□□□□ -1.92
PSPC1-205ENST00000497722 AIMP1Q12904 312 aaKnown RBP3.06□□□□□ -1.92
PSPC1-205ENST00000497722 BAATQ14032 418 aaPredicted RBP3.06□□□□□ -1.92
PSPC1-205ENST00000497722 KCTD2Q14681 263 aa3.06□□□□□ -1.92
PSPC1-205ENST00000497722 RRS1Q15050 365 aaKnown RBP3.06□□□□□ -1.92
PSPC1-205ENST00000497722 GARNL3Q5VVW2 1013 aa3.06□□□□□ -1.92
PSPC1-205ENST00000497722 SLC30A6Q6NXT4 461 aa3.06□□□□□ -1.92
PSPC1-205ENST00000497722 CORO6Q6QEF8 472 aa3.06□□□□□ -1.92
PSPC1-205ENST00000497722 ATG9AQ7Z3C6 839 aa3.06□□□□□ -1.92
PSPC1-205ENST00000497722 ZNF554Q86TJ5 538 aa3.06□□□□□ -1.92
PSPC1-205ENST00000497722 PRPF39Q86UA1 669 aaKnown RBP3.06□□□□□ -1.92
PSPC1-205ENST00000497722 CEP57Q86XR8 500 aa3.06□□□□□ -1.92
PSPC1-205ENST00000497722 CRYBG2Q8N1P7 616 aa3.06□□□□□ -1.92
PSPC1-205ENST00000497722 L3MBTL4Q8NA19 623 aa3.06□□□□□ -1.92
PSPC1-205ENST00000497722 KCTD6Q8NC69 237 aa3.06□□□□□ -1.92
PSPC1-205ENST00000497722 PAPD5Q8NDF8 572 aaKnown RBP3.06□□□□□ -1.92
PSPC1-205ENST00000497722 OR10V1Q8NGI7 309 aa3.06□□□□□ -1.92
PSPC1-205ENST00000497722 OR2AJ1Q8NGZ0 328 aa3.06□□□□□ -1.92
PSPC1-205ENST00000497722 CCDC107Q8WV48 283 aa3.06□□□□□ -1.92
PSPC1-205ENST00000497722 TAF15Q92804 592 aaKnown RBP eCLIP3.06□□□□□ -1.92
PSPC1-205ENST00000497722 SLAMF9Q96A28 289 aa3.06□□□□□ -1.92
PSPC1-205ENST00000497722 ALG14Q96F25 216 aa3.06□□□□□ -1.92
PSPC1-205ENST00000497722 DGAT2Q96PD7 388 aa3.06□□□□□ -1.92
PSPC1-205ENST00000497722 MYADMQ96S97 322 aa3.06□□□□□ -1.92
PSPC1-205ENST00000497722 LMF2Q9BU23 707 aaKnown RBP3.06□□□□□ -1.92
PSPC1-205ENST00000497722 ABHD6Q9BV23 337 aa3.06□□□□□ -1.92
PSPC1-205ENST00000497722 PANK2Q9BZ23 570 aa3.06□□□□□ -1.92
PSPC1-205ENST00000497722 DPAGT1Q9H3H5 408 aa3.06□□□□□ -1.92
PSPC1-205ENST00000497722 GOLPH3LQ9H4A5 285 aa3.06□□□□□ -1.92
PSPC1-205ENST00000497722 ANKEF1Q9NU02 776 aa3.06□□□□□ -1.92
PSPC1-205ENST00000497722 NKIRAS2Q9NYR9 191 aa3.06□□□□□ -1.92
PSPC1-205ENST00000497722 RHCGQ9UBD6 479 aa3.06□□□□□ -1.92
PSPC1-205ENST00000497722 ZHX1Q9UKY1 873 aaPredicted RBP3.06□□□□□ -1.92
PSPC1-205ENST00000497722 SNED1Q8TER0 1413 aa3.05□□□□□ -1.92
PSPC1-205ENST00000497722 ANKUB1A6NFN9 424 aa3.05□□□□□ -1.92
PSPC1-205ENST00000497722 ADAM20O43506 726 aa3.05□□□□□ -1.92
PSPC1-205ENST00000497722 MED24O75448 989 aa3.05□□□□□ -1.92
PSPC1-205ENST00000497722 GCNT3O95395 438 aa3.05□□□□□ -1.92
PSPC1-205ENST00000497722 GGPS1O95749 300 aa3.05□□□□□ -1.92
PSPC1-205ENST00000497722 MYBL1P10243 752 aa3.05□□□□□ -1.92
PSPC1-205ENST00000497722 ACP2P11117 423 aa3.05□□□□□ -1.92
PSPC1-205ENST00000497722 PCGF2P35227 344 aa3.05□□□□□ -1.92
PSPC1-205ENST00000497722 TIMP3P35625 211 aa3.05□□□□□ -1.92
PSPC1-205ENST00000497722 MTHFRP42898 656 aa3.05□□□□□ -1.92
PSPC1-205ENST00000497722 NR2C2P49116 596 aa3.05□□□□□ -1.92
PSPC1-205ENST00000497722 CSE1LP55060 971 aaKnown RBP3.05□□□□□ -1.92
PSPC1-205ENST00000497722 RUNX1T1Q06455 604 aa3.05□□□□□ -1.92
PSPC1-205ENST00000497722 RASA2Q15283 850 aa3.05□□□□□ -1.92
PSPC1-205ENST00000497722 CBWD6Q4V339 395 aa3.05□□□□□ -1.92
PSPC1-205ENST00000497722 MDH1BQ5I0G3 518 aa3.05□□□□□ -1.92
PSPC1-205ENST00000497722 CBWD3Q5JTY5 395 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms