RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 ZNF202O95125 648 aa5.94□□□□□ -1.46
BRCA1-224ENST00000497488 NXPH3O95157 252 aa5.94□□□□□ -1.46
BRCA1-224ENST00000497488 SPP1P10451 314 aa5.94□□□□□ -1.46
BRCA1-224ENST00000497488 SPINK2P20155 84 aa5.94□□□□□ -1.46
BRCA1-224ENST00000497488 NMBRP28336 390 aa5.94□□□□□ -1.46
BRCA1-224ENST00000497488 CORO1AP31146 461 aaKnown RBP5.94□□□□□ -1.46
BRCA1-224ENST00000497488 GABRA5P31644 462 aa5.94□□□□□ -1.46
BRCA1-224ENST00000497488 HSPA1LP34931 641 aa5.94□□□□□ -1.46
BRCA1-224ENST00000497488 ASCL1P50553 236 aa5.94□□□□□ -1.46
BRCA1-224ENST00000497488 CLCNKAP51800 687 aa5.94□□□□□ -1.46
BRCA1-224ENST00000497488 COPB1P53618 953 aaKnown RBP5.94□□□□□ -1.46
BRCA1-224ENST00000497488 UBE2HP62256 183 aa5.94□□□□□ -1.46
BRCA1-224ENST00000497488 POLR2LP62875 67 aaKnown RBP5.94□□□□□ -1.46
BRCA1-224ENST00000497488 SPIBQ01892 262 aa5.94□□□□□ -1.46
BRCA1-224ENST00000497488 EGR4Q05215 589 aa5.94□□□□□ -1.46
BRCA1-224ENST00000497488 GABPB1Q06547 395 aaPredicted RBP5.94□□□□□ -1.46
BRCA1-224ENST00000497488 DDX39BQ13838 428 aaKnown RBP5.94□□□□□ -1.46
BRCA1-224ENST00000497488 MFSD13AQ14CX5 517 aa5.94□□□□□ -1.46
BRCA1-224ENST00000497488 FAM174BQ3ZCQ3 159 aa5.94□□□□□ -1.46
BRCA1-224ENST00000497488 CFAP221Q4G0U5 840 aa5.94□□□□□ -1.46
BRCA1-224ENST00000497488 SYTL3Q4VX76 610 aa5.94□□□□□ -1.46
BRCA1-224ENST00000497488 PLEKHA7Q6IQ23 1121 aa5.94□□□□□ -1.46
BRCA1-224ENST00000497488 DHRS13Q6UX07 377 aa5.94□□□□□ -1.46
BRCA1-224ENST00000497488 RANBP10Q6VN20 620 aa5.94□□□□□ -1.46
BRCA1-224ENST00000497488 RNF207Q6ZRF8 634 aa5.94□□□□□ -1.46
BRCA1-224ENST00000497488 LINGO2Q7L985 606 aa5.94□□□□□ -1.46
BRCA1-224ENST00000497488 GDF7Q7Z4P5 450 aa5.94□□□□□ -1.46
BRCA1-224ENST00000497488 TP53INP2Q8IXH6 220 aa5.94□□□□□ -1.46
BRCA1-224ENST00000497488 IQCF2Q8IXL9 164 aa5.94□□□□□ -1.46
BRCA1-224ENST00000497488 ANKRD13CQ8N6S4 541 aa5.94□□□□□ -1.46
BRCA1-224ENST00000497488 BEST2Q8NFU1 509 aa5.94□□□□□ -1.46
BRCA1-224ENST00000497488 ADAMTS17Q8TE56 1095 aa5.94□□□□□ -1.46
BRCA1-224ENST00000497488 GANCQ8TET4 914 aa5.94□□□□□ -1.46
BRCA1-224ENST00000497488 WIPF2Q8TF74 440 aaPredicted RBP5.94□□□□□ -1.46
BRCA1-224ENST00000497488 NEU4Q8WWR8 484 aaPredicted RBP5.94□□□□□ -1.46
BRCA1-224ENST00000497488 METTL21AQ8WXB1 218 aa5.94□□□□□ -1.46
BRCA1-224ENST00000497488 FIG4Q92562 907 aa5.94□□□□□ -1.46
BRCA1-224ENST00000497488 ALG8Q9BVK2 526 aa5.94□□□□□ -1.46
BRCA1-224ENST00000497488 HIPK3Q9H422 1215 aa5.94□□□□□ -1.46
BRCA1-224ENST00000497488 RPAP3Q9H6T3 665 aaPredicted RBP5.94□□□□□ -1.46
BRCA1-224ENST00000497488 LRRC40Q9H9A6 602 aa5.94□□□□□ -1.46
BRCA1-224ENST00000497488 KCNK12Q9HB15 430 aa5.94□□□□□ -1.46
BRCA1-224ENST00000497488 KCNMB3Q9NPA1 279 aa5.94□□□□□ -1.46
BRCA1-224ENST00000497488 GAR1Q9NY12 217 aaKnown RBP5.94□□□□□ -1.46
BRCA1-224ENST00000497488 EHD3Q9NZN3 535 aa5.94□□□□□ -1.46
BRCA1-224ENST00000497488 IPO11Q9UI26 975 aaKnown RBP5.94□□□□□ -1.46
BRCA1-224ENST00000497488 DBNLQ9UJU6 430 aaKnown RBP5.94□□□□□ -1.46
BRCA1-224ENST00000497488 EIF2AK4Q9P2K8 1649 aaKnown RBP5.94□□□□□ -1.46
BRCA1-224ENST00000497488 ADGRL2O95490 1459 aa5.94□□□□□ -1.46
BRCA1-224ENST00000497488 PREX1Q8TCU6 1659 aa5.94□□□□□ -1.46
BRCA1-224ENST00000497488 PIK3R4Q99570 1358 aa5.93□□□□□ -1.46
BRCA1-224ENST00000497488 NCOA1Q15788 1441 aa5.93□□□□□ -1.46
BRCA1-224ENST00000497488 ERBINQ96RT1 1412 aa5.93□□□□□ -1.46
BRCA1-224ENST00000497488 A0A1W2PPQ1 181 aa5.93□□□□□ -1.46
BRCA1-224ENST00000497488 FAM90A10PA6NDY2 464 aa5.93□□□□□ -1.46
BRCA1-224ENST00000497488 ZSCAN5BA6NJL1 495 aa5.93□□□□□ -1.46
BRCA1-224ENST00000497488 H0YGN5 161 aa5.93□□□□□ -1.46
BRCA1-224ENST00000497488 CLIC1O00299 241 aa5.93□□□□□ -1.46
BRCA1-224ENST00000497488 CYP27B1O15528 508 aa5.93□□□□□ -1.46
BRCA1-224ENST00000497488 ATP9AO75110 1047 aa5.93□□□□□ -1.46
BRCA1-224ENST00000497488 ATP2C2O75185 946 aa5.93□□□□□ -1.46
BRCA1-224ENST00000497488 VNN2O95498 520 aa5.93□□□□□ -1.46
BRCA1-224ENST00000497488 HOXC9P31274 260 aa5.93□□□□□ -1.46
BRCA1-224ENST00000497488 MAGEB1P43366 347 aa5.93□□□□□ -1.46
BRCA1-224ENST00000497488 HNRNPFP52597 415 aaKnown RBP5.93□□□□□ -1.46
BRCA1-224ENST00000497488 CYP4F2P78329 520 aa5.93□□□□□ -1.46
BRCA1-224ENST00000497488 LARS2Q15031 903 aaKnown RBP5.93□□□□□ -1.46
BRCA1-224ENST00000497488 C2orf68Q2NKX9 166 aa5.93□□□□□ -1.46
BRCA1-224ENST00000497488 SPDYE7PQ495Y7 208 aa5.93□□□□□ -1.46
BRCA1-224ENST00000497488 NADK2Q4G0N4 442 aa5.93□□□□□ -1.46
BRCA1-224ENST00000497488 KCTD21Q4G0X4 260 aa5.93□□□□□ -1.46
BRCA1-224ENST00000497488 MCMDC2Q4G0Z9 681 aa5.93□□□□□ -1.46
BRCA1-224ENST00000497488 FILIP1LQ4L180 1135 aa5.93□□□□□ -1.46
BRCA1-224ENST00000497488 ESCO2Q56NI9 601 aa5.93□□□□□ -1.46
BRCA1-224ENST00000497488 RNASE12Q5GAN4 147 aaKnown RBP5.93□□□□□ -1.46
BRCA1-224ENST00000497488 CFAP157Q5JU67 520 aa5.93□□□□□ -1.46
BRCA1-224ENST00000497488 ARHGAP17Q68EM7 881 aa5.93□□□□□ -1.46
BRCA1-224ENST00000497488 CYB5D1Q6P9G0 228 aa5.93□□□□□ -1.46
BRCA1-224ENST00000497488 IRF2BP2Q7Z5L9 587 aa5.93□□□□□ -1.46
BRCA1-224ENST00000497488 CUZD1Q86UP6 607 aa5.93□□□□□ -1.46
BRCA1-224ENST00000497488 NUDT13Q86X67 352 aa5.93□□□□□ -1.46
BRCA1-224ENST00000497488 KLHDC8AQ8IYD2 350 aa5.93□□□□□ -1.46
BRCA1-224ENST00000497488 EIF1ADQ8N9N8 165 aaKnown RBP5.93□□□□□ -1.46
BRCA1-224ENST00000497488 ABHD11Q8NFV4 315 aa5.93□□□□□ -1.46
BRCA1-224ENST00000497488 OR56B1Q8NGI3 324 aa5.93□□□□□ -1.46
BRCA1-224ENST00000497488 AGR3Q8TD06 166 aa5.93□□□□□ -1.46
BRCA1-224ENST00000497488 GPT2Q8TD30 523 aa5.93□□□□□ -1.46
BRCA1-224ENST00000497488 SELENOMQ8WWX9 145 aa5.93□□□□□ -1.46
BRCA1-224ENST00000497488 ADAMTS14Q8WXS8 1223 aa5.93□□□□□ -1.46
BRCA1-224ENST00000497488 CFAP36Q96G28 342 aa5.93□□□□□ -1.46
BRCA1-224ENST00000497488 CDKN2AIPNLQ96HQ2 116 aa5.93□□□□□ -1.46
BRCA1-224ENST00000497488 MNTQ99583 582 aa5.93□□□□□ -1.46
BRCA1-224ENST00000497488 THAP7Q9BT49 309 aaPredicted RBP5.93□□□□□ -1.46
BRCA1-224ENST00000497488 GATA5Q9BWX5 397 aaPredicted RBP5.93□□□□□ -1.46
BRCA1-224ENST00000497488 TMEM117Q9H0C3 514 aa5.93□□□□□ -1.46
BRCA1-224ENST00000497488 MAGIXQ9H6Y5 334 aa5.93□□□□□ -1.46
BRCA1-224ENST00000497488 TRPM5Q9NZQ8 1165 aa5.93□□□□□ -1.46
BRCA1-224ENST00000497488 NDRG3Q9UGV2 375 aa5.93□□□□□ -1.46
BRCA1-224ENST00000497488 ATP6V1HQ9UI12 483 aa5.93□□□□□ -1.46
BRCA1-224ENST00000497488 CFAP45Q9UL16 551 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms