RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 CELF2O95319 508 aaKnown RBP3.84□□□□□ -1.79
SMC4-225ENST00000497203 ZBTB11O95625 1053 aaPredicted RBP3.84□□□□□ -1.79
SMC4-225ENST00000497203 RAB40ALP0C0E4 278 aa3.84□□□□□ -1.79
SMC4-225ENST00000497203 CSF2RAP15509 400 aa3.84□□□□□ -1.79
SMC4-225ENST00000497203 ITGA2P17301 1181 aa3.84□□□□□ -1.79
SMC4-225ENST00000497203 PSMC4P43686 418 aa3.84□□□□□ -1.79
SMC4-225ENST00000497203 ARCN1P48444 511 aaKnown RBP3.84□□□□□ -1.79
SMC4-225ENST00000497203 ART1P52961 327 aa3.84□□□□□ -1.79
SMC4-225ENST00000497203 KRT83P78385 493 aa3.84□□□□□ -1.79
SMC4-225ENST00000497203 PPARDQ03181 441 aa3.84□□□□□ -1.79
SMC4-225ENST00000497203 PRKCZQ05513 592 aa3.84□□□□□ -1.79
SMC4-225ENST00000497203 TROAPQ12815 778 aa3.84□□□□□ -1.79
SMC4-225ENST00000497203 NDUFAF5Q5TEU4 345 aa3.84□□□□□ -1.79
SMC4-225ENST00000497203 PRSS57Q6UWY2 283 aa3.84□□□□□ -1.79
SMC4-225ENST00000497203 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.84□□□□□ -1.79
SMC4-225ENST00000497203 FAM47EQ6ZV65 393 aa3.84□□□□□ -1.79
SMC4-225ENST00000497203 ARMC9Q7Z3E5 817 aa3.84□□□□□ -1.79
SMC4-225ENST00000497203 SATL1Q86VE3 508 aa3.84□□□□□ -1.79
SMC4-225ENST00000497203 PTOV1Q86YD1 416 aa3.84□□□□□ -1.79
SMC4-225ENST00000497203 DCP1BQ8IZD4 617 aaKnown RBP3.84□□□□□ -1.79
SMC4-225ENST00000497203 Q8NFD4 153 aa3.84□□□□□ -1.79
SMC4-225ENST00000497203 LNX1Q8TBB1 728 aaPredicted RBP3.84□□□□□ -1.79
SMC4-225ENST00000497203 ATP6V1E2Q96A05 226 aa3.84□□□□□ -1.79
SMC4-225ENST00000497203 OXNAD1Q96HP4 312 aaPredicted RBP3.84□□□□□ -1.79
SMC4-225ENST00000497203 CITED2Q99967 270 aaPredicted RBP3.84□□□□□ -1.79
SMC4-225ENST00000497203 FERMT1Q9BQL6 677 aa3.84□□□□□ -1.79
SMC4-225ENST00000497203 BTBD10Q9BSF8 475 aa3.84□□□□□ -1.79
SMC4-225ENST00000497203 ST6GALNAC4Q9H4F1 302 aa3.84□□□□□ -1.79
SMC4-225ENST00000497203 C6orf106Q9H6K1 298 aaPredicted RBP3.84□□□□□ -1.79
SMC4-225ENST00000497203 RHCGQ9UBD6 479 aa3.84□□□□□ -1.79
SMC4-225ENST00000497203 GTF3C4Q9UKN8 822 aa3.84□□□□□ -1.79
SMC4-225ENST00000497203 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.84□□□□□ -1.793e-12■□□□□ 9.1
SMC4-225ENST00000497203 A0A0G2JNG1 304 aa3.83□□□□□ -1.8
SMC4-225ENST00000497203 ARHGEF37A1IGU5 675 aa3.83□□□□□ -1.8
SMC4-225ENST00000497203 ANXA2P2A6NMY6 339 aa3.83□□□□□ -1.8
SMC4-225ENST00000497203 PRR32B1ATL7 298 aa3.83□□□□□ -1.8
SMC4-225ENST00000497203 TRIM77I1YAP6 450 aa3.83□□□□□ -1.8
SMC4-225ENST00000497203 CCER2I3L3R5 266 aa3.83□□□□□ -1.8
SMC4-225ENST00000497203 CLDN4O14493 209 aa3.83□□□□□ -1.8
SMC4-225ENST00000497203 ACOT8O14734 319 aa3.83□□□□□ -1.8
SMC4-225ENST00000497203 TFAP2AP05549 437 aa3.83□□□□□ -1.8
SMC4-225ENST00000497203 CDH1P12830 882 aa3.83□□□□□ -1.8
SMC4-225ENST00000497203 HLA-DOBP13765 273 aa3.83□□□□□ -1.8
SMC4-225ENST00000497203 MCCP23508 829 aa3.83□□□□□ -1.8
SMC4-225ENST00000497203 CTNNA1P35221 906 aaKnown RBP3.83□□□□□ -1.8
SMC4-225ENST00000497203 NPY4RP50391 375 aa3.83□□□□□ -1.8
SMC4-225ENST00000497203 ASCL1P50553 236 aa3.83□□□□□ -1.8
SMC4-225ENST00000497203 ACSM1Q08AH1 577 aa3.83□□□□□ -1.8
SMC4-225ENST00000497203 ZBTB17Q13105 803 aa3.83□□□□□ -1.8
SMC4-225ENST00000497203 PPIGQ13427 754 aaKnown RBP eCLIP3.83□□□□□ -1.8
SMC4-225ENST00000497203 ZNF273Q14593 569 aa3.83□□□□□ -1.8
SMC4-225ENST00000497203 KIR2DS5Q14953 304 aa3.83□□□□□ -1.8
SMC4-225ENST00000497203 DUOXA1Q1HG43 343 aa3.83□□□□□ -1.8
SMC4-225ENST00000497203 IZUMO4Q1ZYL8 232 aa3.83□□□□□ -1.8
SMC4-225ENST00000497203 C9orf57Q5W0N0 161 aa3.83□□□□□ -1.8
SMC4-225ENST00000497203 PRR27Q6MZM9 219 aa3.83□□□□□ -1.8
SMC4-225ENST00000497203 C11orf88Q6PI97 169 aa3.83□□□□□ -1.8
SMC4-225ENST00000497203 LINGO4Q6UY18 593 aa3.83□□□□□ -1.8
SMC4-225ENST00000497203 ZBTB49Q6ZSB9 765 aa3.83□□□□□ -1.8
SMC4-225ENST00000497203 C18orf65Q6ZTR6 163 aa3.83□□□□□ -1.8
SMC4-225ENST00000497203 TMPRSS11FQ6ZWK6 438 aa3.83□□□□□ -1.8
SMC4-225ENST00000497203 C16orf82Q7Z2V1 217 aa3.83□□□□□ -1.8
SMC4-225ENST00000497203 LONP2Q86WA8 852 aa3.83□□□□□ -1.8
SMC4-225ENST00000497203 GPALPP1Q8IXQ4 340 aa3.83□□□□□ -1.8
SMC4-225ENST00000497203 OR8H3Q8N146 312 aa3.83□□□□□ -1.8
SMC4-225ENST00000497203 LINGO1Q96FE5 620 aa3.83□□□□□ -1.8
SMC4-225ENST00000497203 RMDN2Q96LZ7 410 aa3.83□□□□□ -1.8
SMC4-225ENST00000497203 ZNF558Q96NG5 402 aa3.83□□□□□ -1.8
SMC4-225ENST00000497203 TBC1D17Q9HA65 648 aa3.83□□□□□ -1.8
SMC4-225ENST00000497203 GRPEL1Q9HAV7 217 aa3.83□□□□□ -1.8
SMC4-225ENST00000497203 KLHL1Q9NR64 748 aa3.83□□□□□ -1.8
SMC4-225ENST00000497203 ARGLU1Q9NWB6 273 aaPredicted RBP3.83□□□□□ -1.8
SMC4-225ENST00000497203 RASAL2Q9UJF2 1139 aa3.83□□□□□ -1.8
SMC4-225ENST00000497203 CPSF3Q9UKF6 684 aaKnown RBP3.83□□□□□ -1.8
SMC4-225ENST00000497203 PCDHGB1Q9Y5G3 927 aa3.83□□□□□ -1.8
SMC4-225ENST00000497203 LIPGQ9Y5X9 500 aa3.83□□□□□ -1.8
SMC4-225ENST00000497203 SPIN1Q9Y657 262 aaPredicted RBP3.83□□□□□ -1.8
SMC4-225ENST00000497203 SOS1Q07889 1333 aaPredicted RBP3.83□□□□□ -1.8
SMC4-225ENST00000497203 CNTNAP2Q9UHC6 1331 aa3.83□□□□□ -1.8
SMC4-225ENST00000497203 A0A1W2PPM1 405 aa3.82□□□□□ -1.8
SMC4-225ENST00000497203 A0A1W2PS18 150 aa3.82□□□□□ -1.8
SMC4-225ENST00000497203 ASPDHA6ND91 283 aa3.82□□□□□ -1.8
SMC4-225ENST00000497203 TMEM221A6NGB7 291 aa3.82□□□□□ -1.8
SMC4-225ENST00000497203 PRSS44E7EML9 344 aa3.82□□□□□ -1.8
SMC4-225ENST00000497203 PRR23D1E9PI22 279 aaPredicted RBP3.82□□□□□ -1.8
SMC4-225ENST00000497203 WISP2O76076 250 aa3.82□□□□□ -1.8
SMC4-225ENST00000497203 GCNT3O95395 438 aa3.82□□□□□ -1.8
SMC4-225ENST00000497203 PENKP01210 267 aaPredicted RBP3.82□□□□□ -1.8
SMC4-225ENST00000497203 LIPFP07098 398 aa3.82□□□□□ -1.8
SMC4-225ENST00000497203 KRT19P08727 400 aa3.82□□□□□ -1.8
SMC4-225ENST00000497203 OR52Z1P0C646 297 aa3.82□□□□□ -1.8
SMC4-225ENST00000497203 PRR23D2P0DMB1 279 aaPredicted RBP3.82□□□□□ -1.8
SMC4-225ENST00000497203 PSMA3P25788 255 aa3.82□□□□□ -1.8
SMC4-225ENST00000497203 HOXC8P31273 242 aa3.82□□□□□ -1.8
SMC4-225ENST00000497203 SLC6A6P31641 620 aa3.82□□□□□ -1.8
SMC4-225ENST00000497203 MMP15P51511 669 aa3.82□□□□□ -1.8
SMC4-225ENST00000497203 BMXP51813 675 aa3.82□□□□□ -1.8
SMC4-225ENST00000497203 CAPZA1P52907 286 aa3.82□□□□□ -1.8
SMC4-225ENST00000497203 RPS18P62269 152 aaKnown RBP3.82□□□□□ -1.8
SMC4-225ENST00000497203 SCN1BQ07699 218 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms