RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 GGPS1O95749 300 aa4.5□□□□□ -1.69
VPS36-206ENST00000497149 ACP2P11117 423 aa4.5□□□□□ -1.69
VPS36-206ENST00000497149 NR1D1P20393 614 aa4.5□□□□□ -1.69
VPS36-206ENST00000497149 MC5RP33032 325 aa4.5□□□□□ -1.69
VPS36-206ENST00000497149 SLC9A3P48764 834 aa4.5□□□□□ -1.69
VPS36-206ENST00000497149 ZNF75DP51815 510 aa4.5□□□□□ -1.69
VPS36-206ENST00000497149 DLX5P56178 289 aa4.5□□□□□ -1.69
VPS36-206ENST00000497149 RALGDSQ12967 914 aa4.5□□□□□ -1.69
VPS36-206ENST00000497149 HSPB3Q12988 150 aa4.5□□□□□ -1.69
VPS36-206ENST00000497149 MFAP5Q13361 173 aa4.5□□□□□ -1.69
VPS36-206ENST00000497149 ZRSR1Q15695 479 aaKnown RBP4.5□□□□□ -1.69
VPS36-206ENST00000497149 ACCSLQ4AC99 568 aa4.5□□□□□ -1.69
VPS36-206ENST00000497149 MDH1BQ5I0G3 518 aa4.5□□□□□ -1.69
VPS36-206ENST00000497149 LINGO4Q6UY18 593 aa4.5□□□□□ -1.69
VPS36-206ENST00000497149 GDPD4Q6W3E5 623 aa4.5□□□□□ -1.69
VPS36-206ENST00000497149 RBPMS2Q6ZRY4 209 aaKnown RBP4.5□□□□□ -1.69
VPS36-206ENST00000497149 IQCHQ86VS3 1027 aa4.5□□□□□ -1.69
VPS36-206ENST00000497149 CEP57L1Q8IYX8 460 aa4.5□□□□□ -1.69
VPS36-206ENST00000497149 CIARTQ8N365 385 aaPredicted RBP4.5□□□□□ -1.69
VPS36-206ENST00000497149 CPSF7Q8N684 471 aaKnown RBP4.5□□□□□ -1.69
VPS36-206ENST00000497149 OR5M8Q8NGP6 311 aa4.5□□□□□ -1.69
VPS36-206ENST00000497149 SECISBP2LQ93073 1101 aaKnown RBP4.5□□□□□ -1.69
VPS36-206ENST00000497149 SLAMF9Q96A28 289 aa4.5□□□□□ -1.69
VPS36-206ENST00000497149 RMDN1Q96DB5 314 aa4.5□□□□□ -1.69
VPS36-206ENST00000497149 LMLNQ96KR4 655 aa4.5□□□□□ -1.69
VPS36-206ENST00000497149 CFAP57Q96MR6 1250 aa4.5□□□□□ -1.69
VPS36-206ENST00000497149 BTBD10Q9BSF8 475 aa4.5□□□□□ -1.69
VPS36-206ENST00000497149 CNOT10Q9H9A5 744 aaKnown RBP4.5□□□□□ -1.69
VPS36-206ENST00000497149 TCF7L2Q9NQB0 619 aa4.5□□□□□ -1.69
VPS36-206ENST00000497149 PTTG2Q9NZH5 202 aa4.5□□□□□ -1.69
VPS36-206ENST00000497149 A0A1W2PPM1 405 aa4.49□□□□□ -1.69
VPS36-206ENST00000497149 H7C0S8 307 aa4.49□□□□□ -1.69
VPS36-206ENST00000497149 CRYAAP02489 173 aa4.49□□□□□ -1.69
VPS36-206ENST00000497149 APOA4P06727 396 aa4.49□□□□□ -1.69
VPS36-206ENST00000497149 MARK3P27448 753 aa4.49□□□□□ -1.69
VPS36-206ENST00000497149 THOP1P52888 689 aa4.49□□□□□ -1.69
VPS36-206ENST00000497149 RAD23AP54725 363 aa4.49□□□□□ -1.69
VPS36-206ENST00000497149 TPD52P55327 224 aaPredicted RBP4.49□□□□□ -1.69
VPS36-206ENST00000497149 HNRNPKP61978 463 aaKnown RBP eCLIP4.49□□□□□ -1.69
VPS36-206ENST00000497149 KLHL26Q53HC5 615 aa4.49□□□□□ -1.69
VPS36-206ENST00000497149 FAM76BQ5HYJ3 339 aa4.49□□□□□ -1.69
VPS36-206ENST00000497149 C1orf141Q5JVX7 400 aa4.49□□□□□ -1.69
VPS36-206ENST00000497149 ARMC4Q5T2S8 1044 aa4.49□□□□□ -1.69
VPS36-206ENST00000497149 CST9LP1Q5W188 147 aa4.49□□□□□ -1.69
VPS36-206ENST00000497149 C18orf65Q6ZTR6 163 aa4.49□□□□□ -1.69
VPS36-206ENST00000497149 TMPRSS11FQ6ZWK6 438 aa4.49□□□□□ -1.69
VPS36-206ENST00000497149 FAM114A1Q8IWE2 563 aa4.49□□□□□ -1.69
VPS36-206ENST00000497149 XXYLT1Q8NBI6 393 aa4.49□□□□□ -1.69
VPS36-206ENST00000497149 PPFIBP2Q8ND30 876 aa4.49□□□□□ -1.69
VPS36-206ENST00000497149 SLC24A4Q8NFF2 622 aa4.49□□□□□ -1.69
VPS36-206ENST00000497149 OR6J1Q8NGC5 347 aa4.49□□□□□ -1.69
VPS36-206ENST00000497149 RNF128Q8TEB7 428 aa4.49□□□□□ -1.69
VPS36-206ENST00000497149 ZNF653Q96CK0 615 aa4.49□□□□□ -1.69
VPS36-206ENST00000497149 SPDL1Q96EA4 605 aa4.49□□□□□ -1.69
VPS36-206ENST00000497149 ST6GAL2Q96JF0 529 aa4.49□□□□□ -1.69
VPS36-206ENST00000497149 ANKRD2Q9GZV1 360 aa4.49□□□□□ -1.69
VPS36-206ENST00000497149 PELI2Q9HAT8 420 aa4.49□□□□□ -1.69
VPS36-206ENST00000497149 ZBTB20Q9HC78 741 aaPredicted RBP4.49□□□□□ -1.69
VPS36-206ENST00000497149 ZFP57Q9NU63 452 aa4.49□□□□□ -1.69
VPS36-206ENST00000497149 DPP3Q9NY33 737 aa4.49□□□□□ -1.69
VPS36-206ENST00000497149 SLC24A2Q9UI40 661 aa4.49□□□□□ -1.69
VPS36-206ENST00000497149 LRP12Q9Y561 859 aa4.49□□□□□ -1.69
VPS36-206ENST00000497149 SOS1Q07889 1333 aaPredicted RBP4.48□□□□□ -1.69
VPS36-206ENST00000497149 HYKKA2RU49 373 aa4.48□□□□□ -1.69
VPS36-206ENST00000497149 BMPR1BO00238 502 aa4.48□□□□□ -1.69
VPS36-206ENST00000497149 PRKNO60260 465 aaPredicted RBP4.48□□□□□ -1.69
VPS36-206ENST00000497149 FYNP06241 537 aa4.48□□□□□ -1.69
VPS36-206ENST00000497149 MSH3P20585 1137 aa4.48□□□□□ -1.69
VPS36-206ENST00000497149 RAB28P51157 221 aa4.48□□□□□ -1.69
VPS36-206ENST00000497149 RPS18P62269 152 aaKnown RBP4.48□□□□□ -1.69
VPS36-206ENST00000497149 PTPRCAPQ14761 206 aa4.48□□□□□ -1.69
VPS36-206ENST00000497149 CCNYL2Q5T2Q4 361 aa4.48□□□□□ -1.69
VPS36-206ENST00000497149 ANO5Q75V66 913 aa4.48□□□□□ -1.69
VPS36-206ENST00000497149 CENPVQ7Z7K6 275 aaPredicted RBP4.48□□□□□ -1.69
VPS36-206ENST00000497149 COMMD2Q86X83 199 aa4.48□□□□□ -1.69
VPS36-206ENST00000497149 TTC30BQ8N4P2 665 aa4.48□□□□□ -1.69
VPS36-206ENST00000497149 ZNF473Q8WTR7 871 aaKnown RBP4.48□□□□□ -1.69
VPS36-206ENST00000497149 ATL1Q8WXF7 558 aa4.48□□□□□ -1.69
VPS36-206ENST00000497149 VPS33AQ96AX1 596 aa4.48□□□□□ -1.69
VPS36-206ENST00000497149 HDAC11Q96DB2 347 aa4.48□□□□□ -1.69
VPS36-206ENST00000497149 SGK494Q96LW2 274 aa4.48□□□□□ -1.69
VPS36-206ENST00000497149 AP1M1Q9BXS5 423 aa4.48□□□□□ -1.69
VPS36-206ENST00000497149 VN1R1Q9GZP7 353 aa4.48□□□□□ -1.69
VPS36-206ENST00000497149 UPF2Q9HAU5 1272 aaKnown RBP4.48□□□□□ -1.69
VPS36-206ENST00000497149 TAAR2Q9P1P5 351 aa4.48□□□□□ -1.69
VPS36-206ENST00000497149 STK26Q9P289 416 aa4.48□□□□□ -1.69
VPS36-206ENST00000497149 TUBE1Q9UJT0 475 aa4.48□□□□□ -1.69
VPS36-206ENST00000497149 ZHX1Q9UKY1 873 aaPredicted RBP4.48□□□□□ -1.69
VPS36-206ENST00000497149 PROCRQ9UNN8 238 aa4.48□□□□□ -1.69
VPS36-206ENST00000497149 JRKLQ9Y4A0 524 aa4.48□□□□□ -1.69
VPS36-206ENST00000497149 GREB1LQ9C091 1923 aaPredicted RBP4.47□□□□□ -1.69
VPS36-206ENST00000497149 PRSS44E7EML9 344 aa4.47□□□□□ -1.69
VPS36-206ENST00000497149 MEIS2O14770 477 aa4.47□□□□□ -1.69
VPS36-206ENST00000497149 IKBKBO14920 756 aa4.47□□□□□ -1.69
VPS36-206ENST00000497149 SLCO2B1O94956 709 aa4.47□□□□□ -1.69
VPS36-206ENST00000497149 PCGF2P35227 344 aa4.47□□□□□ -1.69
VPS36-206ENST00000497149 MTHFRP42898 656 aa4.47□□□□□ -1.69
VPS36-206ENST00000497149 NR2C2P49116 596 aa4.47□□□□□ -1.69
VPS36-206ENST00000497149 DMP1Q13316 513 aaPredicted RBP4.47□□□□□ -1.69
VPS36-206ENST00000497149 VWC2Q2TAL6 325 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms