RNA–Protein interactions for RNA: ENST00000497122.5

SOX2-OT-216, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 578 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-216ENST00000497122 HSF1Q00613 529 aa5.29□□□□□ -1.56
SOX2-OT-216ENST00000497122 AKAP17AQ02040 695 aaKnown RBP5.29□□□□□ -1.56
SOX2-OT-216ENST00000497122 CFHR1Q03591 330 aa5.29□□□□□ -1.56
SOX2-OT-216ENST00000497122 LAMB3Q13751 1172 aa5.29□□□□□ -1.56
SOX2-OT-216ENST00000497122 SMTNL2Q2TAL5 461 aa5.29□□□□□ -1.56
SOX2-OT-216ENST00000497122 FAM198BQ6UWH4 519 aa5.29□□□□□ -1.56
SOX2-OT-216ENST00000497122 NHLRC1Q6VVB1 395 aa5.29□□□□□ -1.56
SOX2-OT-216ENST00000497122 MARK2Q7KZI7 788 aaKnown RBP5.29□□□□□ -1.56
SOX2-OT-216ENST00000497122 TRAPPC11Q7Z392 1133 aa5.29□□□□□ -1.56
SOX2-OT-216ENST00000497122 IRF2BP2Q7Z5L9 587 aa5.29□□□□□ -1.56
SOX2-OT-216ENST00000497122 BEST3Q8N1M1 668 aa5.29□□□□□ -1.56
SOX2-OT-216ENST00000497122 KIAA0895Q8NCT3 520 aa5.29□□□□□ -1.56
SOX2-OT-216ENST00000497122 CNNM3Q8NE01 707 aa5.29□□□□□ -1.56
SOX2-OT-216ENST00000497122 RNASE8Q8TDE3 154 aaKnown RBP5.29□□□□□ -1.56
SOX2-OT-216ENST00000497122 EEF2KMTQ96G04 330 aa5.29□□□□□ -1.56
SOX2-OT-216ENST00000497122 FEVQ99581 238 aa5.29□□□□□ -1.56
SOX2-OT-216ENST00000497122 GFI1Q99684 422 aa5.29□□□□□ -1.56
SOX2-OT-216ENST00000497122 C16orf70Q9BSU1 422 aa5.29□□□□□ -1.56
SOX2-OT-216ENST00000497122 HAUS8Q9BT25 410 aa5.29□□□□□ -1.56
SOX2-OT-216ENST00000497122 MSTO1Q9BUK6 570 aa5.29□□□□□ -1.56
SOX2-OT-216ENST00000497122 POLDIP3Q9BY77 421 aaKnown RBP5.29□□□□□ -1.56
SOX2-OT-216ENST00000497122 KCNN2Q9H2S1 579 aa5.29□□□□□ -1.56
SOX2-OT-216ENST00000497122 TMEM45AQ9NWC5 275 aa5.29□□□□□ -1.56
SOX2-OT-216ENST00000497122 OSER1Q9NX31 292 aa5.29□□□□□ -1.56
SOX2-OT-216ENST00000497122 AATFQ9NY61 560 aaKnown RBP eCLIP5.29□□□□□ -1.56
SOX2-OT-216ENST00000497122 OR6C3Q9NZP0 311 aa5.29□□□□□ -1.56
SOX2-OT-216ENST00000497122 HMG20BQ9P0W2 317 aa5.29□□□□□ -1.56
SOX2-OT-216ENST00000497122 KLHL13Q9P2N7 655 aa5.29□□□□□ -1.56
SOX2-OT-216ENST00000497122 RHCGQ9UBD6 479 aa5.29□□□□□ -1.56
SOX2-OT-216ENST00000497122 DUSP12Q9UNI6 340 aa5.29□□□□□ -1.56
SOX2-OT-216ENST00000497122 IKBKGQ9Y6K9 419 aa5.29□□□□□ -1.56
SOX2-OT-216ENST00000497122 SQORQ9Y6N5 450 aa5.29□□□□□ -1.56
SOX2-OT-216ENST00000497122 MAGEA13PA6NCF6 341 aa5.28□□□□□ -1.56
SOX2-OT-216ENST00000497122 SDR42E2A6NKP2 422 aa5.28□□□□□ -1.56
SOX2-OT-216ENST00000497122 HEPACAM2A8MVW5 462 aa5.28□□□□□ -1.56
SOX2-OT-216ENST00000497122 CACNB4O00305 520 aaPredicted RBP5.28□□□□□ -1.56
SOX2-OT-216ENST00000497122 SPINT2O43291 252 aa5.28□□□□□ -1.56
SOX2-OT-216ENST00000497122 AKR7A3O95154 331 aa5.28□□□□□ -1.56
SOX2-OT-216ENST00000497122 LUC7L3O95232 432 aaKnown RBP5.28□□□□□ -1.56
SOX2-OT-216ENST00000497122 TGFAP01135 160 aa5.28□□□□□ -1.56
SOX2-OT-216ENST00000497122 OR2T7P0C7T2 308 aa5.28□□□□□ -1.56
SOX2-OT-216ENST00000497122 DANCRP0C864 163 aa5.28□□□□□ -1.56
SOX2-OT-216ENST00000497122 RPA1P27694 616 aa5.28□□□□□ -1.56
SOX2-OT-216ENST00000497122 BDKRB2P30411 391 aa5.28□□□□□ -1.56
SOX2-OT-216ENST00000497122 SFNP31947 248 aa5.28□□□□□ -1.56
SOX2-OT-216ENST00000497122 SMSP52788 366 aa5.28□□□□□ -1.56
SOX2-OT-216ENST00000497122 UCP2P55851 309 aa5.28□□□□□ -1.56
SOX2-OT-216ENST00000497122 NR1D2Q14995 579 aa5.28□□□□□ -1.56
SOX2-OT-216ENST00000497122 ZNF789Q5FWF6 425 aa5.28□□□□□ -1.56
SOX2-OT-216ENST00000497122 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.28□□□□□ -1.56
SOX2-OT-216ENST00000497122 C12orf60Q5U649 245 aa5.28□□□□□ -1.56
SOX2-OT-216ENST00000497122 SUMO4Q6EEV6 95 aa5.28□□□□□ -1.56
SOX2-OT-216ENST00000497122 MFSD12Q6NUT3 480 aa5.28□□□□□ -1.56
SOX2-OT-216ENST00000497122 CYB5D1Q6P9G0 228 aa5.28□□□□□ -1.56
SOX2-OT-216ENST00000497122 KCTD18Q6PI47 426 aaPredicted RBP5.28□□□□□ -1.56
SOX2-OT-216ENST00000497122 CASC1Q6TDU7 716 aa5.28□□□□□ -1.56
SOX2-OT-216ENST00000497122 KDELC1Q6UW63 502 aa5.28□□□□□ -1.56
SOX2-OT-216ENST00000497122 TMPRSS11FQ6ZWK6 438 aa5.28□□□□□ -1.56
SOX2-OT-216ENST00000497122 PPP1R42Q7Z4L9 355 aa5.28□□□□□ -1.56
SOX2-OT-216ENST00000497122 GPSM1Q86YR5 675 aa5.28□□□□□ -1.56
SOX2-OT-216ENST00000497122 FAM114A1Q8IWE2 563 aa5.28□□□□□ -1.56
SOX2-OT-216ENST00000497122 AQP12AQ8IXF9 295 aa5.28□□□□□ -1.56
SOX2-OT-216ENST00000497122 KDM8Q8N371 416 aa5.28□□□□□ -1.56
SOX2-OT-216ENST00000497122 CCNYQ8ND76 341 aa5.28□□□□□ -1.56
SOX2-OT-216ENST00000497122 B4GALNT2Q8NHY0 566 aa5.28□□□□□ -1.56
SOX2-OT-216ENST00000497122 BBS10Q8TAM1 723 aa5.28□□□□□ -1.56
SOX2-OT-216ENST00000497122 ADAMTS14Q8WXS8 1223 aa5.28□□□□□ -1.56
SOX2-OT-216ENST00000497122 PANX3Q96QZ0 392 aa5.28□□□□□ -1.56
SOX2-OT-216ENST00000497122 KXD1Q9BQD3 176 aa5.28□□□□□ -1.56
SOX2-OT-216ENST00000497122 SEMA6AQ9H2E6 1030 aa5.28□□□□□ -1.56
SOX2-OT-216ENST00000497122 SNX25Q9H3E2 840 aa5.28□□□□□ -1.56
SOX2-OT-216ENST00000497122 MMP25Q9NPA2 562 aa5.28□□□□□ -1.56
SOX2-OT-216ENST00000497122 PRMT8Q9NR22 394 aaPredicted RBP5.28□□□□□ -1.56
SOX2-OT-216ENST00000497122 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.28□□□□□ -1.56
SOX2-OT-216ENST00000497122 ACSL5Q9ULC5 683 aa5.28□□□□□ -1.56
SOX2-OT-216ENST00000497122 ZNF541Q9H0D2 1346 aa5.27□□□□□ -1.57
SOX2-OT-216ENST00000497122 FEZF1A0PJY2 475 aa5.27□□□□□ -1.57
SOX2-OT-216ENST00000497122 DUXAA6NLW8 204 aa5.27□□□□□ -1.57
SOX2-OT-216ENST00000497122 A6NNC1 897 aa5.27□□□□□ -1.57
SOX2-OT-216ENST00000497122 PTGESO14684 152 aa5.27□□□□□ -1.57
SOX2-OT-216ENST00000497122 TO15178 435 aa5.27□□□□□ -1.57
SOX2-OT-216ENST00000497122 PEX11AO75192 247 aa5.27□□□□□ -1.57
SOX2-OT-216ENST00000497122 LETM1O95202 739 aaPredicted RBP5.27□□□□□ -1.57
SOX2-OT-216ENST00000497122 MYL6BP14649 208 aa5.27□□□□□ -1.57
SOX2-OT-216ENST00000497122 CHRNB2P17787 502 aa5.27□□□□□ -1.57
SOX2-OT-216ENST00000497122 GPD1P21695 349 aa5.27□□□□□ -1.57
SOX2-OT-216ENST00000497122 MPZP25189 248 aa5.27□□□□□ -1.57
SOX2-OT-216ENST00000497122 NPBWR1P48145 328 aa5.27□□□□□ -1.57
SOX2-OT-216ENST00000497122 SLC9A3P48764 834 aa5.27□□□□□ -1.57
SOX2-OT-216ENST00000497122 COMPP49747 757 aaPredicted RBP5.27□□□□□ -1.57
SOX2-OT-216ENST00000497122 NUDT6P53370 316 aa5.27□□□□□ -1.57
SOX2-OT-216ENST00000497122 TAS2R38P59533 333 aa5.27□□□□□ -1.57
SOX2-OT-216ENST00000497122 KARSQ15046 597 aaKnown RBP5.27□□□□□ -1.57
SOX2-OT-216ENST00000497122 RABEP1Q15276 862 aa5.27□□□□□ -1.57
SOX2-OT-216ENST00000497122 INAQ16352 499 aa5.27□□□□□ -1.57
SOX2-OT-216ENST00000497122 UGP2Q16851 508 aa5.27□□□□□ -1.57
SOX2-OT-216ENST00000497122 SYT16Q17RD7 645 aa5.27□□□□□ -1.57
SOX2-OT-216ENST00000497122 TAF1BQ53T94 588 aaPredicted RBP5.27□□□□□ -1.57
SOX2-OT-216ENST00000497122 PHLDB2Q86SQ0 1253 aa5.27□□□□□ -1.57
SOX2-OT-216ENST00000497122 GPR180Q86V85 440 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms