RNA–Protein interactions for RNA: ENST00000496906.1

RGP1-202, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 5

Gene RGP1, Length 1,586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-202ENST00000496906 LMX1AQ8TE12 382 aa17.86■□□□□ 0.45
RGP1-202ENST00000496906 ATOH1Q92858 354 aaPredicted RBP17.86■□□□□ 0.45
RGP1-202ENST00000496906 NUSAP1Q9BXS6 441 aaKnown RBP17.86■□□□□ 0.45
RGP1-202ENST00000496906 SMOC1Q9H4F8 434 aa17.86■□□□□ 0.45
RGP1-202ENST00000496906 TFB2MQ9H5Q4 396 aaKnown RBP17.86■□□□□ 0.45
RGP1-202ENST00000496906 TMEM216Q9P0N5 145 aa17.86■□□□□ 0.45
RGP1-202ENST00000496906 GRID1Q9ULK0 1009 aa17.86■□□□□ 0.45
RGP1-202ENST00000496906 PCDH15Q96QU1 1955 aa17.86■□□□□ 0.45
RGP1-202ENST00000496906 A0A1B0GTQ1 180 aa17.85■□□□□ 0.45
RGP1-202ENST00000496906 CDC7O00311 574 aa17.85■□□□□ 0.45
RGP1-202ENST00000496906 ARHGAP33O14559 1287 aa17.85■□□□□ 0.45
RGP1-202ENST00000496906 AQP9O43315 295 aa17.85■□□□□ 0.45
RGP1-202ENST00000496906 SDC3O75056 442 aa17.85■□□□□ 0.45
RGP1-202ENST00000496906 EML2O95834 649 aa17.85■□□□□ 0.45
RGP1-202ENST00000496906 KPNA2P52292 529 aaKnown RBP17.85■□□□□ 0.45
RGP1-202ENST00000496906 IRX4P78413 519 aa17.85■□□□□ 0.45
RGP1-202ENST00000496906 ABRQ12979 859 aa17.85■□□□□ 0.45
RGP1-202ENST00000496906 TSNQ15631 228 aaKnown RBP17.85■□□□□ 0.45
RGP1-202ENST00000496906 HLA-BQ31612 363 aa17.85■□□□□ 0.45
RGP1-202ENST00000496906 TECRLQ5HYJ1 363 aa17.85■□□□□ 0.45
RGP1-202ENST00000496906 ABRAXAS1Q6UWZ7 409 aa17.85■□□□□ 0.45
RGP1-202ENST00000496906 TCP10LQ8TDR4 215 aa17.85■□□□□ 0.45
RGP1-202ENST00000496906 ASB11Q8WXH4 323 aa17.85■□□□□ 0.45
RGP1-202ENST00000496906 KIAA1191Q96A73 305 aa17.85■□□□□ 0.45
RGP1-202ENST00000496906 IQCGQ9H095 443 aaKnown RBP17.85■□□□□ 0.45
RGP1-202ENST00000496906 C12orf65Q9H3J6 166 aaKnown RBP17.85■□□□□ 0.45
RGP1-202ENST00000496906 ALG9Q9H6U8 611 aa17.85■□□□□ 0.45
RGP1-202ENST00000496906 SCHIP1Q9P0W5 487 aaPredicted RBP17.85■□□□□ 0.45
RGP1-202ENST00000496906 ADAMTS6Q9UKP5 1117 aa17.85■□□□□ 0.45
RGP1-202ENST00000496906 EMCNQ9ULC0 261 aa17.85■□□□□ 0.45
RGP1-202ENST00000496906 PLLPQ9Y342 182 aa17.85■□□□□ 0.45
RGP1-202ENST00000496906 HCN4Q9Y3Q4 1203 aa17.85■□□□□ 0.45
RGP1-202ENST00000496906 TMEM120BA0PK00 339 aa17.84■□□□□ 0.45
RGP1-202ENST00000496906 IFRD1O00458 451 aaPredicted RBP17.84■□□□□ 0.45
RGP1-202ENST00000496906 PSIP1O75475 530 aaKnown RBP17.84■□□□□ 0.45
RGP1-202ENST00000496906 SYPP08247 313 aa17.84■□□□□ 0.45
RGP1-202ENST00000496906 EPHA8P29322 1005 aaPredicted RBP17.84■□□□□ 0.45
RGP1-202ENST00000496906 HPDP32754 393 aaPredicted RBP17.84■□□□□ 0.45
RGP1-202ENST00000496906 RPA3P35244 121 aaPredicted RBP17.84■□□□□ 0.45
RGP1-202ENST00000496906 NBL1P41271 181 aa17.84■□□□□ 0.45
RGP1-202ENST00000496906 MAPK9P45984 424 aa17.84■□□□□ 0.45
RGP1-202ENST00000496906 SP140Q13342 867 aa17.84■□□□□ 0.45
RGP1-202ENST00000496906 MPP2Q14168 576 aa17.84■□□□□ 0.45
RGP1-202ENST00000496906 CLCA4Q14CN2 919 aa17.84■□□□□ 0.45
RGP1-202ENST00000496906 OR4D1Q15615 310 aa17.84■□□□□ 0.45
RGP1-202ENST00000496906 C16orf46Q6P387 395 aa17.84■□□□□ 0.45
RGP1-202ENST00000496906 SBSNQ6UWP8 590 aa17.84■□□□□ 0.45
RGP1-202ENST00000496906 ADAMTSL2Q86TH1 951 aa17.84■□□□□ 0.45
RGP1-202ENST00000496906 GKN2Q86XP6 184 aa17.84■□□□□ 0.45
RGP1-202ENST00000496906 SDR16C5Q8N3Y7 309 aa17.84■□□□□ 0.45
RGP1-202ENST00000496906 RHEBL1Q8TAI7 183 aa17.84■□□□□ 0.45
RGP1-202ENST00000496906 DLG3Q92796 817 aa17.84■□□□□ 0.45
RGP1-202ENST00000496906 FOPNLQ96NB1 174 aa17.84■□□□□ 0.45
RGP1-202ENST00000496906 GAREM1Q9H706 876 aa17.84■□□□□ 0.45
RGP1-202ENST00000496906 KCNK9Q9NPC2 374 aa17.84■□□□□ 0.45
RGP1-202ENST00000496906 FAM86C1Q9NVL1 165 aa17.84■□□□□ 0.45
RGP1-202ENST00000496906 UCKL1Q9NWZ5 548 aa17.84■□□□□ 0.45
RGP1-202ENST00000496906 XPR1Q9UBH6 696 aa17.84■□□□□ 0.45
RGP1-202ENST00000496906 ZFC3H1O60293 1989 aaKnown RBP17.84■□□□□ 0.45
RGP1-202ENST00000496906 TMEM131Q92545 1883 aa17.84■□□□□ 0.45
RGP1-202ENST00000496906 CCDC189A1A4V9 331 aa17.83■□□□□ 0.45
RGP1-202ENST00000496906 LMO7DNF2Z398 122 aa17.83■□□□□ 0.45
RGP1-202ENST00000496906 GFYI3L273 518 aa17.83■□□□□ 0.45
RGP1-202ENST00000496906 KHNYNO15037 678 aaKnown RBP17.83■□□□□ 0.45
RGP1-202ENST00000496906 DFNA5O60443 496 aa17.83■□□□□ 0.45
RGP1-202ENST00000496906 C8GP07360 202 aa17.83■□□□□ 0.45
RGP1-202ENST00000496906 RBP1P09455 135 aa17.83■□□□□ 0.45
RGP1-202ENST00000496906 F3P13726 295 aa17.83■□□□□ 0.45
RGP1-202ENST00000496906 BNIP3Q12983 259 aa17.83■□□□□ 0.45
RGP1-202ENST00000496906 PPP1R3AQ16821 1122 aa17.83■□□□□ 0.45
RGP1-202ENST00000496906 TCEAL6Q6IPX3 200 aa17.83■□□□□ 0.45
RGP1-202ENST00000496906 UNC5DQ6UXZ4 953 aa17.83■□□□□ 0.45
RGP1-202ENST00000496906 TMEM151AQ8N4L1 468 aa17.83■□□□□ 0.45
RGP1-202ENST00000496906 CFAP61Q8NHU2 1237 aa17.83■□□□□ 0.45
RGP1-202ENST00000496906 STAG3L4Q8TBR4 150 aa17.83■□□□□ 0.45
RGP1-202ENST00000496906 TFGQ92734 400 aaPredicted RBP17.83■□□□□ 0.45
RGP1-202ENST00000496906 TCEAL3Q969E4 200 aa17.83■□□□□ 0.45
RGP1-202ENST00000496906 SCYL1Q96KG9 808 aa17.83■□□□□ 0.45
RGP1-202ENST00000496906 INSM2Q96T92 566 aaPredicted RBP17.83■□□□□ 0.45
RGP1-202ENST00000496906 MRPL57Q9BQC6 102 aaKnown RBP17.83■□□□□ 0.45
RGP1-202ENST00000496906 MRPL46Q9H2W6 279 aaKnown RBP17.83■□□□□ 0.45
RGP1-202ENST00000496906 IL21RQ9HBE5 538 aa17.83■□□□□ 0.45
RGP1-202ENST00000496906 SLC17A7Q9P2U7 560 aa17.83■□□□□ 0.45
RGP1-202ENST00000496906 GMEB2Q9UKD1 530 aa17.83■□□□□ 0.45
RGP1-202ENST00000496906 TDRD6O60522 2096 aaKnown RBP17.83■□□□□ 0.44
RGP1-202ENST00000496906 TK2O00142 265 aa17.83■□□□□ 0.44
RGP1-202ENST00000496906 TM9SF1O15321 606 aa17.83■□□□□ 0.44
RGP1-202ENST00000496906 SLC16A5O15375 505 aa17.83■□□□□ 0.44
RGP1-202ENST00000496906 YY2O15391 372 aa17.83■□□□□ 0.44
RGP1-202ENST00000496906 YKT6O15498 198 aa17.83■□□□□ 0.44
RGP1-202ENST00000496906 PLIN3O60664 434 aa17.83■□□□□ 0.44
RGP1-202ENST00000496906 KERAO60938 352 aa17.83■□□□□ 0.44
RGP1-202ENST00000496906 CER1O95813 267 aa17.83■□□□□ 0.44
RGP1-202ENST00000496906 PROCP04070 461 aa17.83■□□□□ 0.44
RGP1-202ENST00000496906 SBK3P0C264 359 aa17.83■□□□□ 0.44
RGP1-202ENST00000496906 HALP42357 657 aa17.83■□□□□ 0.44
RGP1-202ENST00000496906 KCNC1P48547 511 aa17.83■□□□□ 0.44
RGP1-202ENST00000496906 SLC18A1P54219 525 aa17.83■□□□□ 0.44
RGP1-202ENST00000496906 CCDC153Q494R4 210 aa17.83■□□□□ 0.44
RGP1-202ENST00000496906 UBE2R2Q712K3 238 aaPredicted RBP17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms