RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 NTRK1P04629 796 aa13.87□□□□□ -0.19
VTI1A-209ENST00000496445 FDFT1P37268 417 aa13.87□□□□□ -0.19
VTI1A-209ENST00000496445 NSG1P42857 185 aa13.87□□□□□ -0.19
VTI1A-209ENST00000496445 CD151P48509 253 aa13.87□□□□□ -0.19
VTI1A-209ENST00000496445 ARL4DP49703 201 aa13.87□□□□□ -0.19
VTI1A-209ENST00000496445 RPA4Q13156 261 aa13.87□□□□□ -0.19
VTI1A-209ENST00000496445 SEMA5AQ13591 1074 aa13.87□□□□□ -0.19
VTI1A-209ENST00000496445 DNASE1L3Q13609 305 aa13.87□□□□□ -0.19
VTI1A-209ENST00000496445 LAMB3Q13751 1172 aa13.87□□□□□ -0.19
VTI1A-209ENST00000496445 BOP1Q14137 746 aaKnown RBP13.87□□□□□ -0.19
VTI1A-209ENST00000496445 KRT33BQ14525 404 aa13.87□□□□□ -0.19
VTI1A-209ENST00000496445 ITIH4Q14624 930 aa13.87□□□□□ -0.19
VTI1A-209ENST00000496445 MEI1Q5TIA1 1274 aa13.87□□□□□ -0.19
VTI1A-209ENST00000496445 PACS1Q6VY07 963 aa13.87□□□□□ -0.19
VTI1A-209ENST00000496445 TMEM135Q86UB9 458 aa13.87□□□□□ -0.19
VTI1A-209ENST00000496445 CARFQ8N187 725 aa13.87□□□□□ -0.19
VTI1A-209ENST00000496445 LCN9Q8WX39 176 aa13.87□□□□□ -0.19
VTI1A-209ENST00000496445 FCRL4Q96PJ5 515 aa13.87□□□□□ -0.19
VTI1A-209ENST00000496445 FERD3LQ96RJ6 166 aa13.87□□□□□ -0.19
VTI1A-209ENST00000496445 HGH1Q9BTY7 390 aa13.87□□□□□ -0.19
VTI1A-209ENST00000496445 TLR10Q9BXR5 811 aa13.87□□□□□ -0.19
VTI1A-209ENST00000496445 FRMD8P1Q9BZ68 369 aaPredicted RBP13.87□□□□□ -0.19
VTI1A-209ENST00000496445 TFB2MQ9H5Q4 396 aaKnown RBP13.87□□□□□ -0.19
VTI1A-209ENST00000496445 SMARCAL1Q9NZC9 954 aa13.87□□□□□ -0.19
VTI1A-209ENST00000496445 GSAPA4D1B5 854 aa13.86□□□□□ -0.19
VTI1A-209ENST00000496445 SLC9B1P1A6NJY1 282 aa13.86□□□□□ -0.19
VTI1A-209ENST00000496445 IFRD1O00458 451 aaPredicted RBP13.86□□□□□ -0.19
VTI1A-209ENST00000496445 KRT86O43790 486 aa13.86□□□□□ -0.19
VTI1A-209ENST00000496445 CPNE3O75131 537 aaKnown RBP13.86□□□□□ -0.19
VTI1A-209ENST00000496445 KATNA1O75449 491 aa13.86□□□□□ -0.19
VTI1A-209ENST00000496445 MT-ND3P03897 115 aa13.86□□□□□ -0.19
VTI1A-209ENST00000496445 GSTM1P09488 218 aa13.86□□□□□ -0.19
VTI1A-209ENST00000496445 CCNYL3P0C7X3 344 aa13.86□□□□□ -0.19
VTI1A-209ENST00000496445 STIP1P31948 543 aaKnown RBP13.86□□□□□ -0.19
VTI1A-209ENST00000496445 GSTM4Q03013 218 aa13.86□□□□□ -0.19
VTI1A-209ENST00000496445 ACVR1Q04771 509 aa13.86□□□□□ -0.19
VTI1A-209ENST00000496445 ABRQ12979 859 aa13.86□□□□□ -0.19
VTI1A-209ENST00000496445 PRKAA1Q13131 559 aa13.86□□□□□ -0.19
VTI1A-209ENST00000496445 SNX1Q13596 522 aa13.86□□□□□ -0.19
VTI1A-209ENST00000496445 ERV3-1Q14264 604 aa13.86□□□□□ -0.19
VTI1A-209ENST00000496445 SKIDA1Q1XH10 827 aa13.86□□□□□ -0.19
VTI1A-209ENST00000496445 ARMC6Q6NXE6 501 aa13.86□□□□□ -0.19
VTI1A-209ENST00000496445 FAM199XQ6PEV8 388 aaPredicted RBP13.86□□□□□ -0.19
VTI1A-209ENST00000496445 NAPRTQ6XQN6 538 aa13.86□□□□□ -0.19
VTI1A-209ENST00000496445 ZNF534Q76KX8 674 aa13.86□□□□□ -0.19
VTI1A-209ENST00000496445 BPHLQ86WA6 291 aaPredicted RBP13.86□□□□□ -0.19
VTI1A-209ENST00000496445 PTRH1Q86Y79 214 aaKnown RBP13.86□□□□□ -0.19
VTI1A-209ENST00000496445 DNAAF3Q8N9W5 541 aa13.86□□□□□ -0.19
VTI1A-209ENST00000496445 SLC38A9Q8NBW4 561 aa13.86□□□□□ -0.19
VTI1A-209ENST00000496445 PHC3Q8NDX5 983 aa13.86□□□□□ -0.19
VTI1A-209ENST00000496445 APOBEC4Q8WW27 367 aaKnown RBP13.86□□□□□ -0.19
VTI1A-209ENST00000496445 ZNF778Q96MU6 729 aa13.86□□□□□ -0.19
VTI1A-209ENST00000496445 PHF12Q96QT6 1004 aa13.86□□□□□ -0.19
VTI1A-209ENST00000496445 RANBP9Q96S59 729 aa13.86□□□□□ -0.19
VTI1A-209ENST00000496445 PITPNM3Q9BZ71 974 aa13.86□□□□□ -0.19
VTI1A-209ENST00000496445 SRMSQ9H3Y6 488 aa13.86□□□□□ -0.19
VTI1A-209ENST00000496445 XKR8Q9H6D3 395 aa13.86□□□□□ -0.19
VTI1A-209ENST00000496445 MVB12BQ9H7P6 319 aa13.86□□□□□ -0.19
VTI1A-209ENST00000496445 CASS4Q9NQ75 786 aa13.86□□□□□ -0.19
VTI1A-209ENST00000496445 SOHLH2Q9NX45 425 aa13.86□□□□□ -0.19
VTI1A-209ENST00000496445 KCND3Q9UK17 655 aa13.86□□□□□ -0.19
VTI1A-209ENST00000496445 PADI1Q9ULC6 663 aa13.86□□□□□ -0.19
VTI1A-209ENST00000496445 ICKQ9UPZ9 632 aa13.86□□□□□ -0.19
VTI1A-209ENST00000496445 KCNMB2Q9Y691 235 aa13.86□□□□□ -0.19
VTI1A-209ENST00000496445 HEATR9A2RTY3 570 aa13.85□□□□□ -0.19
VTI1A-209ENST00000496445 C21orf140B9A014 251 aa13.85□□□□□ -0.19
VTI1A-209ENST00000496445 MATN2O00339 956 aa13.85□□□□□ -0.19
VTI1A-209ENST00000496445 LIN7AO14910 233 aaPredicted RBP13.85□□□□□ -0.19
VTI1A-209ENST00000496445 ARHGAP6O43182 974 aa13.85□□□□□ -0.19
VTI1A-209ENST00000496445 OR1I1O60431 355 aa13.85□□□□□ -0.19
VTI1A-209ENST00000496445 CREG1O75629 220 aa13.85□□□□□ -0.19
VTI1A-209ENST00000496445 SCRG1O75711 98 aa13.85□□□□□ -0.19
VTI1A-209ENST00000496445 WISP1O95388 367 aa13.85□□□□□ -0.19
VTI1A-209ENST00000496445 GOT2P00505 430 aaKnown RBP13.85□□□□□ -0.19
VTI1A-209ENST00000496445 TPBGLP0DKB5 382 aa13.85□□□□□ -0.19
VTI1A-209ENST00000496445 ST6GAL1P15907 406 aa13.85□□□□□ -0.19
VTI1A-209ENST00000496445 CDH3P22223 829 aa13.85□□□□□ -0.19
VTI1A-209ENST00000496445 PRDX3P30048 256 aaKnown RBP13.85□□□□□ -0.19
VTI1A-209ENST00000496445 GSDMDP57764 484 aa13.85□□□□□ -0.19
VTI1A-209ENST00000496445 RPS18P62269 152 aaKnown RBP13.85□□□□□ -0.19
VTI1A-209ENST00000496445 GPS2Q13227 327 aa13.85□□□□□ -0.19
VTI1A-209ENST00000496445 PRKG2Q13237 762 aa13.85□□□□□ -0.19
VTI1A-209ENST00000496445 SEMA3AQ14563 771 aa13.85□□□□□ -0.19
VTI1A-209ENST00000496445 ZNF789Q5FWF6 425 aa13.85□□□□□ -0.19
VTI1A-209ENST00000496445 TSTD2Q5T7W7 516 aa13.85□□□□□ -0.19
VTI1A-209ENST00000496445 PRAMEF17Q5VTA0 474 aa13.85□□□□□ -0.19
VTI1A-209ENST00000496445 PPP1R21Q6ZMI0 780 aa13.85□□□□□ -0.19
VTI1A-209ENST00000496445 ZNF517Q6ZMY9 492 aaPredicted RBP13.85□□□□□ -0.19
VTI1A-209ENST00000496445 ATG14Q6ZNE5 492 aa13.85□□□□□ -0.19
VTI1A-209ENST00000496445 TMEM126BQ8IUX1 230 aa13.85□□□□□ -0.19
VTI1A-209ENST00000496445 ADGRF3Q8IZF5 1079 aa13.85□□□□□ -0.19
VTI1A-209ENST00000496445 OR5AR1Q8NGP9 310 aa13.85□□□□□ -0.19
VTI1A-209ENST00000496445 C9orf43Q8TAL5 461 aaPredicted RBP13.85□□□□□ -0.19
VTI1A-209ENST00000496445 ELMO1Q92556 727 aa13.85□□□□□ -0.19
VTI1A-209ENST00000496445 TFGQ92734 400 aaPredicted RBP13.85□□□□□ -0.19
VTI1A-209ENST00000496445 HDAC10Q969S8 669 aa13.85□□□□□ -0.19
VTI1A-209ENST00000496445 ABHD17AQ96GS6 310 aa13.85□□□□□ -0.19
VTI1A-209ENST00000496445 ALS2CR12Q96Q35 445 aa13.85□□□□□ -0.19
VTI1A-209ENST00000496445 ACTL8Q9H568 366 aa13.85□□□□□ -0.19
VTI1A-209ENST00000496445 ZNF71Q9NQZ8 489 aaPredicted RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms