RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 HGH1Q9BTY7 390 aa11.32□□□□□ -0.6
VTI1A-208ENST00000494728 KLHL25Q9H0H3 589 aa11.32□□□□□ -0.6
VTI1A-208ENST00000494728 XKR8Q9H6D3 395 aa11.32□□□□□ -0.6
VTI1A-208ENST00000494728 LRRC40Q9H9A6 602 aa11.32□□□□□ -0.6
VTI1A-208ENST00000494728 PDE7BQ9NP56 450 aa11.32□□□□□ -0.6
VTI1A-208ENST00000494728 SLC2A6Q9UGQ3 507 aa11.32□□□□□ -0.6
VTI1A-208ENST00000494728 BTRCQ9Y297 605 aa11.32□□□□□ -0.6
VTI1A-208ENST00000494728 MROH6A6NGR9 719 aa11.31□□□□□ -0.6
VTI1A-208ENST00000494728 SLC9B1P1A6NJY1 282 aa11.31□□□□□ -0.6
VTI1A-208ENST00000494728 HCRTR1O43613 425 aa11.31□□□□□ -0.6
VTI1A-208ENST00000494728 CREG1O75629 220 aa11.31□□□□□ -0.6
VTI1A-208ENST00000494728 SCRG1O75711 98 aa11.31□□□□□ -0.6
VTI1A-208ENST00000494728 ZBTB11O95625 1053 aaPredicted RBP11.31□□□□□ -0.6
VTI1A-208ENST00000494728 TPBGLP0DKB5 382 aa11.31□□□□□ -0.6
VTI1A-208ENST00000494728 ETS1P14921 441 aa11.31□□□□□ -0.6
VTI1A-208ENST00000494728 PSMA3P25788 255 aa11.31□□□□□ -0.6
VTI1A-208ENST00000494728 FOXN2P32314 431 aa11.31□□□□□ -0.6
VTI1A-208ENST00000494728 LMAN1P49257 510 aa11.31□□□□□ -0.6
VTI1A-208ENST00000494728 TUBB4BP68371 445 aa11.31□□□□□ -0.6
VTI1A-208ENST00000494728 PDE1BQ01064 536 aa11.31□□□□□ -0.6
VTI1A-208ENST00000494728 MC1RQ01726 317 aa11.31□□□□□ -0.6
VTI1A-208ENST00000494728 ACY1Q03154 408 aa11.31□□□□□ -0.6
VTI1A-208ENST00000494728 CHAF1BQ13112 559 aa11.31□□□□□ -0.6
VTI1A-208ENST00000494728 TUBB2AQ13885 445 aa11.31□□□□□ -0.6
VTI1A-208ENST00000494728 BOP1Q14137 746 aaKnown RBP11.31□□□□□ -0.6
VTI1A-208ENST00000494728 GSE1Q14687 1217 aa11.31□□□□□ -0.6
VTI1A-208ENST00000494728 OASLQ15646 514 aaKnown RBP11.31□□□□□ -0.6
VTI1A-208ENST00000494728 IGFBP7Q16270 282 aa11.31□□□□□ -0.6
VTI1A-208ENST00000494728 GPR33Q49SQ1 333 aa11.31□□□□□ -0.6
VTI1A-208ENST00000494728 ZNF517Q6ZMY9 492 aaPredicted RBP11.31□□□□□ -0.6
VTI1A-208ENST00000494728 KMT5CQ86Y97 462 aa11.31□□□□□ -0.6
VTI1A-208ENST00000494728 SPC24Q8NBT2 197 aa11.31□□□□□ -0.6
VTI1A-208ENST00000494728 PHC3Q8NDX5 983 aa11.31□□□□□ -0.6
VTI1A-208ENST00000494728 ACVR1CQ8NER5 493 aa11.31□□□□□ -0.6
VTI1A-208ENST00000494728 OR52K1Q8NGK4 314 aa11.31□□□□□ -0.6
VTI1A-208ENST00000494728 OR13J1Q8NGT2 312 aa11.31□□□□□ -0.6
VTI1A-208ENST00000494728 OR1L3Q8NH93 324 aa11.31□□□□□ -0.6
VTI1A-208ENST00000494728 ZNF778Q96MU6 729 aa11.31□□□□□ -0.6
VTI1A-208ENST00000494728 C19orf43Q9BQ61 176 aa11.31□□□□□ -0.6
VTI1A-208ENST00000494728 TUBB2BQ9BVA1 445 aa11.31□□□□□ -0.6
VTI1A-208ENST00000494728 PITPNM3Q9BZ71 974 aa11.31□□□□□ -0.6
VTI1A-208ENST00000494728 TWSG1Q9GZX9 223 aa11.31□□□□□ -0.6
VTI1A-208ENST00000494728 SOHLH2Q9NX45 425 aa11.31□□□□□ -0.6
VTI1A-208ENST00000494728 PADI1Q9ULC6 663 aa11.31□□□□□ -0.6
VTI1A-208ENST00000494728 ICKQ9UPZ9 632 aa11.31□□□□□ -0.6
VTI1A-208ENST00000494728 DOCK10Q96BY6 2186 aa11.31□□□□□ -0.6
VTI1A-208ENST00000494728 C17orf113A0A1B0GUU1 675 aa11.3□□□□□ -0.6
VTI1A-208ENST00000494728 PIPSLA2A3N6 862 aa11.3□□□□□ -0.6
VTI1A-208ENST00000494728 CCDC162PA2VCL2 907 aa11.3□□□□□ -0.6
VTI1A-208ENST00000494728 KLHL33A6NCF5 533 aa11.3□□□□□ -0.6
VTI1A-208ENST00000494728 MIF4GDA9UHW6 222 aaKnown RBP11.3□□□□□ -0.6
VTI1A-208ENST00000494728 CFAP99D6REC4 459 aa11.3□□□□□ -0.6
VTI1A-208ENST00000494728 CAPN1P07384 714 aa11.3□□□□□ -0.6
VTI1A-208ENST00000494728 CTSBP07858 339 aa11.3□□□□□ -0.6
VTI1A-208ENST00000494728 RALBP11234 206 aa11.3□□□□□ -0.6
VTI1A-208ENST00000494728 MSNP26038 577 aaKnown RBP11.3□□□□□ -0.6
VTI1A-208ENST00000494728 PMS2P54278 862 aa11.3□□□□□ -0.6
VTI1A-208ENST00000494728 CACNG1Q06432 222 aa11.3□□□□□ -0.6
VTI1A-208ENST00000494728 PRKG2Q13237 762 aa11.3□□□□□ -0.6
VTI1A-208ENST00000494728 SEMA3AQ14563 771 aa11.3□□□□□ -0.6
VTI1A-208ENST00000494728 LACTB2Q53H82 288 aaPredicted RBP11.3□□□□□ -0.6
VTI1A-208ENST00000494728 FAM198BQ6UWH4 519 aa11.3□□□□□ -0.6
VTI1A-208ENST00000494728 TAS2R42Q7RTR8 314 aa11.3□□□□□ -0.6
VTI1A-208ENST00000494728 TRIM73Q86UV7 250 aa11.3□□□□□ -0.6
VTI1A-208ENST00000494728 TMEM126BQ8IUX1 230 aa11.3□□□□□ -0.6
VTI1A-208ENST00000494728 ADGRF3Q8IZF5 1079 aa11.3□□□□□ -0.6
VTI1A-208ENST00000494728 UBL4BQ8N7F7 174 aa11.3□□□□□ -0.6
VTI1A-208ENST00000494728 OR5AR1Q8NGP9 310 aa11.3□□□□□ -0.6
VTI1A-208ENST00000494728 LKAAEAR1Q8TD35 194 aa11.3□□□□□ -0.6
VTI1A-208ENST00000494728 LCN9Q8WX39 176 aa11.3□□□□□ -0.6
VTI1A-208ENST00000494728 FERD3LQ96RJ6 166 aa11.3□□□□□ -0.6
VTI1A-208ENST00000494728 CCM2Q9BSQ5 444 aa11.3□□□□□ -0.6
VTI1A-208ENST00000494728 CHST8Q9H2A9 424 aa11.3□□□□□ -0.6
VTI1A-208ENST00000494728 FEZ2Q9UHY8 353 aaPredicted RBP11.3□□□□□ -0.6
VTI1A-208ENST00000494728 KCND3Q9UK17 655 aa11.3□□□□□ -0.6
VTI1A-208ENST00000494728 TLK1Q9UKI8 766 aa11.3□□□□□ -0.6
VTI1A-208ENST00000494728 POLHQ9Y253 713 aa11.3□□□□□ -0.6
VTI1A-208ENST00000494728 ICE1Q9Y2F5 2266 aa11.3□□□□□ -0.6
VTI1A-208ENST00000494728 CRYBG3Q68DQ2 2970 aa11.3□□□□□ -0.6
VTI1A-208ENST00000494728 GSAPA4D1B5 854 aa11.29□□□□□ -0.6
VTI1A-208ENST00000494728 GOLGA6L9A6NEM1 432 aa11.29□□□□□ -0.6
VTI1A-208ENST00000494728 C21orf140B9A014 251 aa11.29□□□□□ -0.6
VTI1A-208ENST00000494728 LIASO43766 372 aa11.29□□□□□ -0.6
VTI1A-208ENST00000494728 OR1I1O60431 355 aa11.29□□□□□ -0.6
VTI1A-208ENST00000494728 CPNE3O75131 537 aaKnown RBP11.29□□□□□ -0.6
VTI1A-208ENST00000494728 MT-ND3P03897 115 aa11.29□□□□□ -0.6
VTI1A-208ENST00000494728 PTMAP06454 111 aaKnown RBP11.29□□□□□ -0.6
VTI1A-208ENST00000494728 CCNYL3P0C7X3 344 aa11.29□□□□□ -0.6
VTI1A-208ENST00000494728 CDH3P22223 829 aa11.29□□□□□ -0.6
VTI1A-208ENST00000494728 ACADLP28330 430 aa11.29□□□□□ -0.6
VTI1A-208ENST00000494728 NDUFS1P28331 727 aa11.29□□□□□ -0.6
VTI1A-208ENST00000494728 PRDX3P30048 256 aaKnown RBP11.29□□□□□ -0.6
VTI1A-208ENST00000494728 PEBP1P30086 187 aaKnown RBP11.29□□□□□ -0.6
VTI1A-208ENST00000494728 RORAP35398 523 aa11.29□□□□□ -0.6
VTI1A-208ENST00000494728 CASRP41180 1078 aa11.29□□□□□ -0.6
VTI1A-208ENST00000494728 CETN2P41208 172 aa11.29□□□□□ -0.6
VTI1A-208ENST00000494728 ARL4DP49703 201 aa11.29□□□□□ -0.6
VTI1A-208ENST00000494728 FOXK1P85037 733 aa11.29□□□□□ -0.6
VTI1A-208ENST00000494728 KIF5AQ12840 1032 aa11.29□□□□□ -0.6
VTI1A-208ENST00000494728 BRD3Q15059 726 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms