RNA–Protein interactions for RNA: ENST00000493792.1

TRAPPC12-222, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-222ENST00000493792 TERTO14746 1132 aaKnown RBP10.16□□□□□ -0.78
TRAPPC12-222ENST00000493792 PLD2O14939 933 aa10.16□□□□□ -0.78
TRAPPC12-222ENST00000493792 BANF1O75531 89 aa10.16□□□□□ -0.78
TRAPPC12-222ENST00000493792 RASSF9O75901 435 aa10.16□□□□□ -0.78
TRAPPC12-222ENST00000493792 TNFSF15O95150 251 aa10.16□□□□□ -0.78
TRAPPC12-222ENST00000493792 GSTM1P09488 218 aa10.16□□□□□ -0.78
TRAPPC12-222ENST00000493792 ARNTP27540 789 aa10.16□□□□□ -0.78
TRAPPC12-222ENST00000493792 FMO4P31512 558 aa10.16□□□□□ -0.78
TRAPPC12-222ENST00000493792 CSTF2P33240 577 aaKnown RBP eCLIP10.16□□□□□ -0.78
TRAPPC12-222ENST00000493792 LIMK2P53671 638 aa10.16□□□□□ -0.78
TRAPPC12-222ENST00000493792 ITGA8P53708 1063 aa10.16□□□□□ -0.78
TRAPPC12-222ENST00000493792 GSTM4Q03013 218 aa10.16□□□□□ -0.78
TRAPPC12-222ENST00000493792 ZFP36L1Q07352 338 aaKnown RBP10.16□□□□□ -0.78
TRAPPC12-222ENST00000493792 DHX9Q08211 1270 aaKnown RBP10.16□□□□□ -0.78
TRAPPC12-222ENST00000493792 CALCOCO2Q13137 446 aa10.16□□□□□ -0.78
TRAPPC12-222ENST00000493792 C16orf72Q14CZ0 275 aa10.16□□□□□ -0.78
TRAPPC12-222ENST00000493792 MORF4L2Q15014 288 aa10.16□□□□□ -0.78
TRAPPC12-222ENST00000493792 TMED2Q15363 201 aa10.16□□□□□ -0.78
TRAPPC12-222ENST00000493792 CLPPQ16740 277 aaPredicted RBP10.16□□□□□ -0.78
TRAPPC12-222ENST00000493792 LONRF1Q17RB8 773 aa10.16□□□□□ -0.78
TRAPPC12-222ENST00000493792 ZNF470Q6ECI4 717 aa10.16□□□□□ -0.78
TRAPPC12-222ENST00000493792 NEPROQ6NW34 567 aa10.16□□□□□ -0.78
TRAPPC12-222ENST00000493792 ARMC6Q6NXE6 501 aa10.16□□□□□ -0.78
TRAPPC12-222ENST00000493792 IRGCQ6NXR0 463 aa10.16□□□□□ -0.78
TRAPPC12-222ENST00000493792 TMEM71Q6P5X7 295 aa10.16□□□□□ -0.78
TRAPPC12-222ENST00000493792 ZNF574Q6ZN55 896 aaPredicted RBP10.16□□□□□ -0.78
TRAPPC12-222ENST00000493792 MAATS1Q7Z4T9 603 aa10.16□□□□□ -0.78
TRAPPC12-222ENST00000493792 FAM129CQ86XR2 697 aa10.16□□□□□ -0.78
TRAPPC12-222ENST00000493792 PLXDC1Q8IUK5 500 aa10.16□□□□□ -0.78
TRAPPC12-222ENST00000493792 SLITRK4Q8IW52 837 aa10.16□□□□□ -0.78
TRAPPC12-222ENST00000493792 PDIK1LQ8N165 341 aa10.16□□□□□ -0.78
TRAPPC12-222ENST00000493792 KRT222Q8N1A0 295 aa10.16□□□□□ -0.78
TRAPPC12-222ENST00000493792 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.16□□□□□ -0.78
TRAPPC12-222ENST00000493792 PHC3Q8NDX5 983 aa10.16□□□□□ -0.78
TRAPPC12-222ENST00000493792 OR4D9Q8NGE8 314 aa10.16□□□□□ -0.78
TRAPPC12-222ENST00000493792 GSDMBQ8TAX9 411 aa10.16□□□□□ -0.78
TRAPPC12-222ENST00000493792 PRR11Q96HE9 360 aaPredicted RBP10.16□□□□□ -0.78
TRAPPC12-222ENST00000493792 SLC46A1Q96NT5 459 aa10.16□□□□□ -0.78
TRAPPC12-222ENST00000493792 TGM7Q96PF1 710 aa10.16□□□□□ -0.78
TRAPPC12-222ENST00000493792 HGH1Q9BTY7 390 aa10.16□□□□□ -0.78
TRAPPC12-222ENST00000493792 EPB41L1Q9H4G0 881 aa10.16□□□□□ -0.78
TRAPPC12-222ENST00000493792 UCK1Q9HA47 277 aa10.16□□□□□ -0.78
TRAPPC12-222ENST00000493792 THSD1Q9NS62 852 aa10.16□□□□□ -0.78
TRAPPC12-222ENST00000493792 GNPTGQ9UJJ9 305 aa10.16□□□□□ -0.78
TRAPPC12-222ENST00000493792 CRYL1Q9Y2S2 319 aa10.16□□□□□ -0.78
TRAPPC12-222ENST00000493792 BOD1L1Q8NFC6 3051 aa10.16□□□□□ -0.78
TRAPPC12-222ENST00000493792 COL27A1Q8IZC6 1860 aaPredicted RBP10.15□□□□□ -0.78
TRAPPC12-222ENST00000493792 FAM187AA6NFU0 413 aa10.15□□□□□ -0.78
TRAPPC12-222ENST00000493792 LIN7AO14910 233 aaPredicted RBP10.15□□□□□ -0.78
TRAPPC12-222ENST00000493792 CAPN5O15484 640 aaPredicted RBP10.15□□□□□ -0.78
TRAPPC12-222ENST00000493792 RAD51CO43502 376 aa10.15□□□□□ -0.78
TRAPPC12-222ENST00000493792 USP1O94782 785 aa10.15□□□□□ -0.78
TRAPPC12-222ENST00000493792 SEC31AO94979 1220 aaKnown RBP10.15□□□□□ -0.78
TRAPPC12-222ENST00000493792 APOA4P06727 396 aa10.15□□□□□ -0.78
TRAPPC12-222ENST00000493792 F7P08709 466 aaPredicted RBP10.15□□□□□ -0.78
TRAPPC12-222ENST00000493792 PGAM1P18669 254 aa10.15□□□□□ -0.78
TRAPPC12-222ENST00000493792 ITIH1P19827 911 aa10.15□□□□□ -0.78
TRAPPC12-222ENST00000493792 IVDP26440 423 aa10.15□□□□□ -0.78
TRAPPC12-222ENST00000493792 NDUFS1P28331 727 aa10.15□□□□□ -0.78
TRAPPC12-222ENST00000493792 MLLT3P42568 568 aaPredicted RBP10.15□□□□□ -0.78
TRAPPC12-222ENST00000493792 GFERP55789 205 aa10.15□□□□□ -0.78
TRAPPC12-222ENST00000493792 ARL4CP56559 192 aa10.15□□□□□ -0.78
TRAPPC12-222ENST00000493792 HSPA14Q0VDF9 509 aa10.15□□□□□ -0.78
TRAPPC12-222ENST00000493792 RPA4Q13156 261 aa10.15□□□□□ -0.78
TRAPPC12-222ENST00000493792 PRKG2Q13237 762 aa10.15□□□□□ -0.78
TRAPPC12-222ENST00000493792 EIF3IQ13347 325 aaKnown RBP10.15□□□□□ -0.78
TRAPPC12-222ENST00000493792 HIF1AQ16665 826 aa10.15□□□□□ -0.78
TRAPPC12-222ENST00000493792 LINC00303Q3SY05 128 aa10.15□□□□□ -0.78
TRAPPC12-222ENST00000493792 RNF187Q5TA31 235 aaPredicted RBP10.15□□□□□ -0.78
TRAPPC12-222ENST00000493792 ARMC3Q5W041 872 aa10.15□□□□□ -0.78
TRAPPC12-222ENST00000493792 KLHL35Q6PF15 583 aa10.15□□□□□ -0.78
TRAPPC12-222ENST00000493792 WDR74Q6RFH5 385 aaPredicted RBP10.15□□□□□ -0.78
TRAPPC12-222ENST00000493792 BBOF1Q8ND07 529 aa10.15□□□□□ -0.78
TRAPPC12-222ENST00000493792 AGBL5Q8NDL9 886 aa10.15□□□□□ -0.78
TRAPPC12-222ENST00000493792 CFAP61Q8NHU2 1237 aa10.15□□□□□ -0.78
TRAPPC12-222ENST00000493792 LKAAEAR1Q8TD35 194 aa10.15□□□□□ -0.78
TRAPPC12-222ENST00000493792 SKA2Q8WVK7 121 aaPredicted RBP10.15□□□□□ -0.78
TRAPPC12-222ENST00000493792 RSC1A1Q92681 617 aa10.15□□□□□ -0.78
TRAPPC12-222ENST00000493792 TFGQ92734 400 aaPredicted RBP10.15□□□□□ -0.78
TRAPPC12-222ENST00000493792 FAM136AQ96C01 138 aa10.15□□□□□ -0.78
TRAPPC12-222ENST00000493792 CFAP36Q96G28 342 aa10.15□□□□□ -0.78
TRAPPC12-222ENST00000493792 SIGLEC10Q96LC7 697 aa10.15□□□□□ -0.78
TRAPPC12-222ENST00000493792 PWWP2AQ96N64 755 aa10.15□□□□□ -0.78
TRAPPC12-222ENST00000493792 PANX3Q96QZ0 392 aa10.15□□□□□ -0.78
TRAPPC12-222ENST00000493792 TRIM4Q9C037 500 aa10.15□□□□□ -0.78
TRAPPC12-222ENST00000493792 OR52A5Q9H2C5 316 aa10.15□□□□□ -0.78
TRAPPC12-222ENST00000493792 CCDC68Q9H2F9 335 aa10.15□□□□□ -0.78
TRAPPC12-222ENST00000493792 PPANQ9NQ55 473 aaKnown RBP10.15□□□□□ -0.78
TRAPPC12-222ENST00000493792 SLC24A2Q9UI40 661 aa10.15□□□□□ -0.78
TRAPPC12-222ENST00000493792 TSR3Q9UJK0 312 aaKnown RBP10.15□□□□□ -0.78
TRAPPC12-222ENST00000493792 CHMP2BQ9UQN3 213 aa10.15□□□□□ -0.78
TRAPPC12-222ENST00000493792 ASF1AQ9Y294 204 aa10.15□□□□□ -0.78
TRAPPC12-222ENST00000493792 TDRKHQ9Y2W6 561 aaKnown RBP10.15□□□□□ -0.78
TRAPPC12-222ENST00000493792 RELNP78509 3460 aa10.15□□□□□ -0.79
TRAPPC12-222ENST00000493792 ZCWPW2A0A1B0GU75 182 aa10.14□□□□□ -0.79
TRAPPC12-222ENST00000493792 OR6C74A6NCV1 312 aa10.14□□□□□ -0.79
TRAPPC12-222ENST00000493792 EFCAB7A8K855 629 aa10.14□□□□□ -0.79
TRAPPC12-222ENST00000493792 CDRT15L2A8MXV6 281 aa10.14□□□□□ -0.79
TRAPPC12-222ENST00000493792 E5RI56 91 aa10.14□□□□□ -0.79
TRAPPC12-222ENST00000493792 SMAPO00193 183 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms