RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 MC1RQ01726 317 aa3.62□□□□□ -1.83
SMC4-223ENST00000493695 EPS8Q12929 822 aa3.62□□□□□ -1.83
SMC4-223ENST00000493695 CUL4AQ13619 759 aa3.62□□□□□ -1.83
SMC4-223ENST00000493695 RAPSNQ13702 412 aa3.62□□□□□ -1.83
SMC4-223ENST00000493695 RAB41Q5JT25 222 aa3.62□□□□□ -1.83
SMC4-223ENST00000493695 RARS2Q5T160 578 aaKnown RBP3.62□□□□□ -1.83
SMC4-223ENST00000493695 LRIF1Q5T3J3 769 aa3.62□□□□□ -1.83
SMC4-223ENST00000493695 PAQR6Q6TCH4 344 aa3.62□□□□□ -1.83
SMC4-223ENST00000493695 C16orf54Q6UWD8 224 aa3.62□□□□□ -1.83
SMC4-223ENST00000493695 ERC1Q8IUD2 1116 aa3.62□□□□□ -1.83
SMC4-223ENST00000493695 EMC1Q8N766 993 aa3.62□□□□□ -1.83
SMC4-223ENST00000493695 OMA1Q96E52 524 aa3.62□□□□□ -1.83
SMC4-223ENST00000493695 EGLN2Q96KS0 407 aa3.62□□□□□ -1.83
SMC4-223ENST00000493695 RTP3Q9BQQ7 232 aa3.62□□□□□ -1.83
SMC4-223ENST00000493695 CCDC68Q9H2F9 335 aa3.62□□□□□ -1.83
SMC4-223ENST00000493695 SETD4Q9NVD3 440 aa3.62□□□□□ -1.83
SMC4-223ENST00000493695 HAUS2Q9NVX0 235 aa3.62□□□□□ -1.83
SMC4-223ENST00000493695 WSB2Q9NYS7 404 aaPredicted RBP3.62□□□□□ -1.83
SMC4-223ENST00000493695 SUCLA2Q9P2R7 463 aaPredicted RBP3.62□□□□□ -1.83
SMC4-223ENST00000493695 FBXL17Q9UF56 701 aa3.62□□□□□ -1.83
SMC4-223ENST00000493695 FBXW11Q9UKB1 542 aa3.62□□□□□ -1.83
SMC4-223ENST00000493695 TMEM184BQ9Y519 407 aaPredicted RBP3.62□□□□□ -1.83
SMC4-223ENST00000493695 CLIC4Q9Y696 253 aa3.62□□□□□ -1.83
SMC4-223ENST00000493695 A8MU10 97 aa3.61□□□□□ -1.83
SMC4-223ENST00000493695 AP3D1O14617 1153 aa3.61□□□□□ -1.83
SMC4-223ENST00000493695 ATP2A1O14983 1001 aa3.61□□□□□ -1.83
SMC4-223ENST00000493695 NADKO95544 446 aaPredicted RBP3.61□□□□□ -1.83
SMC4-223ENST00000493695 LDHCP07864 332 aa3.61□□□□□ -1.83
SMC4-223ENST00000493695 CSH1P0DML2 217 aa3.61□□□□□ -1.83
SMC4-223ENST00000493695 CSH2P0DML3 217 aa3.61□□□□□ -1.83
SMC4-223ENST00000493695 ACTN1P12814 892 aa3.61□□□□□ -1.83
SMC4-223ENST00000493695 PORP16435 677 aaPredicted RBP3.61□□□□□ -1.83
SMC4-223ENST00000493695 ACSL1P33121 698 aa3.61□□□□□ -1.83
SMC4-223ENST00000493695 CAMPP49913 170 aa3.61□□□□□ -1.83
SMC4-223ENST00000493695 SGSM1Q2NKQ1 1148 aa3.61□□□□□ -1.83
SMC4-223ENST00000493695 FASTKD1Q53R41 847 aaKnown RBP3.61□□□□□ -1.83
SMC4-223ENST00000493695 WDR78Q5VTH9 848 aa3.61□□□□□ -1.83
SMC4-223ENST00000493695 KIAA0930Q6ICG6 404 aaPredicted RBP3.61□□□□□ -1.83
SMC4-223ENST00000493695 ZNF343Q6P1L6 599 aa3.61□□□□□ -1.83
SMC4-223ENST00000493695 CLEC17AQ6ZS10 378 aa3.61□□□□□ -1.83
SMC4-223ENST00000493695 ATG9AQ7Z3C6 839 aa3.61□□□□□ -1.83
SMC4-223ENST00000493695 PTOV1Q86YD1 416 aa3.61□□□□□ -1.83
SMC4-223ENST00000493695 C11orf53Q8IXP5 236 aa3.61□□□□□ -1.83
SMC4-223ENST00000493695 PM20D2Q8IYS1 436 aa3.61□□□□□ -1.83
SMC4-223ENST00000493695 C1orf52Q8N6N3 182 aaKnown RBP3.61□□□□□ -1.83
SMC4-223ENST00000493695 OR2T12Q8NG77 320 aa3.61□□□□□ -1.83
SMC4-223ENST00000493695 HM13Q8TCT9 377 aa3.61□□□□□ -1.83
SMC4-223ENST00000493695 ELMOD3Q96FG2 381 aa3.61□□□□□ -1.83
SMC4-223ENST00000493695 SDF4Q9BRK5 362 aa3.61□□□□□ -1.83
SMC4-223ENST00000493695 P2RY12Q9H244 342 aa3.61□□□□□ -1.83
SMC4-223ENST00000493695 COQ3Q9NZJ6 369 aa3.61□□□□□ -1.83
SMC4-223ENST00000493695 COPG2Q9UBF2 871 aa3.61□□□□□ -1.83
SMC4-223ENST00000493695 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.61□□□□□ -1.83
SMC4-223ENST00000493695 EXO1Q9UQ84 846 aaKnown RBP3.61□□□□□ -1.83
SMC4-223ENST00000493695 PASKQ96RG2 1323 aa3.61□□□□□ -1.83
SMC4-223ENST00000493695 MYH15Q9Y2K3 1946 aa3.6□□□□□ -1.83
SMC4-223ENST00000493695 OR6C76A6NM76 312 aa3.6□□□□□ -1.83
SMC4-223ENST00000493695 PAPSS1O43252 624 aaPredicted RBP3.6□□□□□ -1.83
SMC4-223ENST00000493695 ZBTB43O43298 467 aa3.6□□□□□ -1.83
SMC4-223ENST00000493695 GPR137BO60478 399 aa3.6□□□□□ -1.83
SMC4-223ENST00000493695 GJB3O75712 270 aa3.6□□□□□ -1.83
SMC4-223ENST00000493695 TSPAN9O75954 239 aa3.6□□□□□ -1.83
SMC4-223ENST00000493695 CSPG5O95196 566 aa3.6□□□□□ -1.83
SMC4-223ENST00000493695 ICAM1P05362 532 aa3.6□□□□□ -1.83
SMC4-223ENST00000493695 TMEM11P17152 192 aa3.6□□□□□ -1.83
SMC4-223ENST00000493695 CEBPBP17676 345 aa3.6□□□□□ -1.83
SMC4-223ENST00000493695 PON1P27169 355 aa3.6□□□□□ -1.83
SMC4-223ENST00000493695 PIK3CAP42336 1068 aa3.6□□□□□ -1.83
SMC4-223ENST00000493695 PRCPP42785 496 aa3.6□□□□□ -1.83
SMC4-223ENST00000493695 NAB2Q15742 525 aa3.6□□□□□ -1.83
SMC4-223ENST00000493695 ZNF805Q5CZA5 627 aa3.6□□□□□ -1.83
SMC4-223ENST00000493695 ACSM2BQ68CK6 577 aa3.6□□□□□ -1.83
SMC4-223ENST00000493695 Q75L30 129 aa3.6□□□□□ -1.83
SMC4-223ENST00000493695 SLC16A9Q7RTY1 509 aa3.6□□□□□ -1.83
SMC4-223ENST00000493695 ZNF843Q8N446 348 aa3.6□□□□□ -1.83
SMC4-223ENST00000493695 RAB42Q8N4Z0 105 aa3.6□□□□□ -1.83
SMC4-223ENST00000493695 ZKSCAN4Q969J2 545 aaPredicted RBP3.6□□□□□ -1.83
SMC4-223ENST00000493695 LRRC59Q96AG4 307 aaKnown RBP3.6□□□□□ -1.83
SMC4-223ENST00000493695 GPATCH1Q9BRR8 931 aaKnown RBP3.6□□□□□ -1.83
SMC4-223ENST00000493695 C1QTNF1Q9BXJ1 281 aa3.6□□□□□ -1.83
SMC4-223ENST00000493695 TRMT1Q9NXH9 659 aaKnown RBP3.6□□□□□ -1.83
SMC4-223ENST00000493695 TERF2IPQ9NYB0 399 aa3.6□□□□□ -1.83
SMC4-223ENST00000493695 SEC63Q9UGP8 760 aaKnown RBP3.6□□□□□ -1.83
SMC4-223ENST00000493695 KLK13Q9UKR3 277 aa3.6□□□□□ -1.83
SMC4-223ENST00000493695 ZNF215Q9UL58 517 aaPredicted RBP3.6□□□□□ -1.83
SMC4-223ENST00000493695 YIPF1Q9Y548 306 aa3.6□□□□□ -1.83
SMC4-223ENST00000493695 ZNF644Q9H582 1327 aaPredicted RBP3.6□□□□□ -1.83
SMC4-223ENST00000493695 hCG_1807616A0A1W2PRN6 198 aa3.59□□□□□ -1.83
SMC4-223ENST00000493695 KANSL1LA0AUZ9 987 aa3.59□□□□□ -1.83
SMC4-223ENST00000493695 PLK4O00444 970 aa3.59□□□□□ -1.83
SMC4-223ENST00000493695 MAP2K7O14733 419 aa3.59□□□□□ -1.83
SMC4-223ENST00000493695 SMAD9O15198 467 aaKnown RBP3.59□□□□□ -1.83
SMC4-223ENST00000493695 HS6ST1O60243 411 aa3.59□□□□□ -1.83
SMC4-223ENST00000493695 CDC123O75794 336 aaPredicted RBP3.59□□□□□ -1.83
SMC4-223ENST00000493695 WISP2O76076 250 aa3.59□□□□□ -1.83
SMC4-223ENST00000493695 ZFAND5O76080 213 aa3.59□□□□□ -1.83
SMC4-223ENST00000493695 HIST1H2ABP04908 130 aa3.59□□□□□ -1.83
SMC4-223ENST00000493695 RB1P06400 928 aa3.59□□□□□ -1.83
SMC4-223ENST00000493695 SRPRAP08240 638 aaKnown RBP3.59□□□□□ -1.83
SMC4-223ENST00000493695 CKMT2P17540 419 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms