RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 BZW1Q7L1Q6 419 aaKnown RBP17.12■□□□□ 0.33
NUP50-218ENST00000493456 OR2Y1Q8NGV0 311 aa17.12■□□□□ 0.33
NUP50-218ENST00000493456 HM13Q8TCT9 377 aa17.12■□□□□ 0.33
NUP50-218ENST00000493456 PROKR1Q8TCW9 393 aa17.12■□□□□ 0.33
NUP50-218ENST00000493456 ZNF398Q8TD17 642 aa17.12■□□□□ 0.33
NUP50-218ENST00000493456 COG1Q8WTW3 980 aa17.12■□□□□ 0.33
NUP50-218ENST00000493456 CTNNBL1Q8WYA6 563 aaPredicted RBP17.12■□□□□ 0.33
NUP50-218ENST00000493456 TRAPPC9Q96Q05 1148 aa17.12■□□□□ 0.33
NUP50-218ENST00000493456 WDR77Q9BQA1 342 aaPredicted RBP17.12■□□□□ 0.33
NUP50-218ENST00000493456 P4HTMQ9NXG6 502 aa17.12■□□□□ 0.33
NUP50-218ENST00000493456 FAM8A1Q9UBU6 413 aa17.12■□□□□ 0.33
NUP50-218ENST00000493456 NTNG1Q9Y2I2 539 aa17.12■□□□□ 0.33
NUP50-218ENST00000493456 PTRH2Q9Y3E5 179 aaKnown RBP17.12■□□□□ 0.33
NUP50-218ENST00000493456 AP1M2Q9Y6Q5 423 aa17.12■□□□□ 0.33
NUP50-218ENST00000493456 PIKFYVEQ9Y2I7 2098 aa17.12■□□□□ 0.33
NUP50-218ENST00000493456 SPTBP11277 2137 aa17.12■□□□□ 0.33
NUP50-218ENST00000493456 C2orf74A8MZ97 194 aa17.11■□□□□ 0.33
NUP50-218ENST00000493456 BTN3A1O00481 513 aa17.11■□□□□ 0.33
NUP50-218ENST00000493456 CD68P34810 354 aaPredicted RBP17.11■□□□□ 0.33
NUP50-218ENST00000493456 PRKD1Q15139 912 aaPredicted RBP17.11■□□□□ 0.33
NUP50-218ENST00000493456 LLGL1Q15334 1064 aa17.11■□□□□ 0.33
NUP50-218ENST00000493456 ZRSR2Q15696 482 aaKnown RBP17.11■□□□□ 0.33
NUP50-218ENST00000493456 RHBDD2Q6NTF9 364 aa17.11■□□□□ 0.33
NUP50-218ENST00000493456 CDHR3Q6ZTQ4 885 aa17.11■□□□□ 0.33
NUP50-218ENST00000493456 SLC25A41Q8N5S1 370 aa17.11■□□□□ 0.33
NUP50-218ENST00000493456 PPP4R1Q8TF05 950 aa17.11■□□□□ 0.33
NUP50-218ENST00000493456 N4BP2L2Q92802 583 aaPredicted RBP17.11■□□□□ 0.33
NUP50-218ENST00000493456 MRGPRX2Q96LB1 330 aa17.11■□□□□ 0.33
NUP50-218ENST00000493456 TFB2MQ9H5Q4 396 aaKnown RBP17.11■□□□□ 0.33
NUP50-218ENST00000493456 NDOR1Q9UHB4 597 aa17.11■□□□□ 0.33
NUP50-218ENST00000493456 NENFQ9UMX5 172 aa17.11■□□□□ 0.33
NUP50-218ENST00000493456 CROCCQ5TZA2 2017 aa17.1■□□□□ 0.33
NUP50-218ENST00000493456 TACC2O95359 2948 aa17.1■□□□□ 0.33
NUP50-218ENST00000493456 ARHGAP10A1A4S6 786 aa17.1■□□□□ 0.33
NUP50-218ENST00000493456 BTN3A3O00478 584 aa17.1■□□□□ 0.33
NUP50-218ENST00000493456 STX7O15400 261 aaKnown RBP17.1■□□□□ 0.33
NUP50-218ENST00000493456 LRRTM2O43300 516 aa17.1■□□□□ 0.33
NUP50-218ENST00000493456 SERPINC1P01008 464 aa17.1■□□□□ 0.33
NUP50-218ENST00000493456 POLBP06746 335 aa17.1■□□□□ 0.33
NUP50-218ENST00000493456 NFKB1P19838 968 aa17.1■□□□□ 0.33
NUP50-218ENST00000493456 HNRNPH3P31942 346 aaKnown RBP17.1■□□□□ 0.33
NUP50-218ENST00000493456 CHRNA4P43681 627 aa17.1■□□□□ 0.33
NUP50-218ENST00000493456 NR2C2P49116 596 aa17.1■□□□□ 0.33
NUP50-218ENST00000493456 ZBED6P86452 979 aa17.1■□□□□ 0.33
NUP50-218ENST00000493456 CYP2A13Q16696 494 aa17.1■□□□□ 0.33
NUP50-218ENST00000493456 SARM1Q6SZW1 724 aa17.1■□□□□ 0.33
NUP50-218ENST00000493456 DAAM2Q86T65 1068 aa17.1■□□□□ 0.33
NUP50-218ENST00000493456 KCNMB4Q86W47 210 aa17.1■□□□□ 0.33
NUP50-218ENST00000493456 RFX6Q8HWS3 928 aa17.1■□□□□ 0.33
NUP50-218ENST00000493456 CFAP206Q8IYR0 622 aa17.1■□□□□ 0.33
NUP50-218ENST00000493456 PTERQ96BW5 349 aa17.1■□□□□ 0.33
NUP50-218ENST00000493456 IQCDQ96DY2 449 aa17.1■□□□□ 0.33
NUP50-218ENST00000493456 GBP5Q96PP8 586 aa17.1■□□□□ 0.33
NUP50-218ENST00000493456 RUBCNLQ9H714 662 aa17.1■□□□□ 0.33
NUP50-218ENST00000493456 ATP13A2Q9NQ11 1180 aa17.1■□□□□ 0.33
NUP50-218ENST00000493456 SRPK3Q9UPE1 567 aa17.1■□□□□ 0.33
NUP50-218ENST00000493456 SEC16AO15027 2179 aa17.1■□□□□ 0.33
NUP50-218ENST00000493456 PDZD2O15018 2839 aa17.1■□□□□ 0.33
NUP50-218ENST00000493456 C17orf113A0A1B0GUU1 675 aa17.09■□□□□ 0.33
NUP50-218ENST00000493456 IFRD1O00458 451 aaPredicted RBP17.09■□□□□ 0.33
NUP50-218ENST00000493456 BUD23O43709 281 aaKnown RBP17.09■□□□□ 0.33
NUP50-218ENST00000493456 OR2B3O76000 313 aa17.09■□□□□ 0.33
NUP50-218ENST00000493456 CBSLP0DN79 551 aa17.09■□□□□ 0.33
NUP50-218ENST00000493456 RALBP11234 206 aa17.09■□□□□ 0.33
NUP50-218ENST00000493456 EDN3P14138 238 aa17.09■□□□□ 0.33
NUP50-218ENST00000493456 PRF1P14222 555 aa17.09■□□□□ 0.33
NUP50-218ENST00000493456 CBSP35520 551 aa17.09■□□□□ 0.33
NUP50-218ENST00000493456 PRLHRP49683 370 aa17.09■□□□□ 0.33
NUP50-218ENST00000493456 DCDP81605 110 aaKnown RBP17.09■□□□□ 0.33
NUP50-218ENST00000493456 AIMP2Q13155 320 aaKnown RBP17.09■□□□□ 0.33
NUP50-218ENST00000493456 MPP3Q13368 585 aa17.09■□□□□ 0.33
NUP50-218ENST00000493456 ODF2Q5BJF6 829 aa17.09■□□□□ 0.33
NUP50-218ENST00000493456 HOOK3Q86VS8 718 aa17.09■□□□□ 0.33
NUP50-218ENST00000493456 AMIGO1Q86WK6 493 aa17.09■□□□□ 0.33
NUP50-218ENST00000493456 LILRA3Q8N6C8 439 aaPredicted RBP17.09■□□□□ 0.33
NUP50-218ENST00000493456 TFB1MQ8WVM0 346 aaKnown RBP17.09■□□□□ 0.33
NUP50-218ENST00000493456 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.09■□□□□ 0.33
NUP50-218ENST00000493456 NACC2Q96BF6 587 aa17.09■□□□□ 0.33
NUP50-218ENST00000493456 DCUN1D1Q96GG9 259 aa17.09■□□□□ 0.33
NUP50-218ENST00000493456 RBM41Q96IZ5 413 aaKnown RBP17.09■□□□□ 0.33
NUP50-218ENST00000493456 FCRL5Q96RD9 977 aa17.09■□□□□ 0.33
NUP50-218ENST00000493456 FERD3LQ96RJ6 166 aa17.09■□□□□ 0.33
NUP50-218ENST00000493456 AP1M1Q9BXS5 423 aa17.09■□□□□ 0.33
NUP50-218ENST00000493456 MVB12BQ9H7P6 319 aa17.09■□□□□ 0.33
NUP50-218ENST00000493456 ZBTB20Q9HC78 741 aaPredicted RBP17.09■□□□□ 0.33
NUP50-218ENST00000493456 IFT80Q9P2H3 777 aaPredicted RBP17.09■□□□□ 0.33
NUP50-218ENST00000493456 NOVA2Q9UNW9 492 aaKnown RBP17.09■□□□□ 0.33
NUP50-218ENST00000493456 PCM1Q15154 2024 aa17.09■□□□□ 0.33
NUP50-218ENST00000493456 HEATR9A2RTY3 570 aa17.08■□□□□ 0.32
NUP50-218ENST00000493456 H3BMH7 237 aa17.08■□□□□ 0.32
NUP50-218ENST00000493456 AGPSO00116 658 aa17.08■□□□□ 0.32
NUP50-218ENST00000493456 E2F3O00716 465 aa17.08■□□□□ 0.32
NUP50-218ENST00000493456 SGTAO43765 313 aa17.08■□□□□ 0.32
NUP50-218ENST00000493456 SRP72O76094 671 aaKnown RBP17.08■□□□□ 0.32
NUP50-218ENST00000493456 KRT1P04264 644 aa17.08■□□□□ 0.32
NUP50-218ENST00000493456 PVRP15151 417 aa17.08■□□□□ 0.32
NUP50-218ENST00000493456 ITGA3P26006 1051 aa17.08■□□□□ 0.32
NUP50-218ENST00000493456 TSFMP43897 325 aaKnown RBP17.08■□□□□ 0.32
NUP50-218ENST00000493456 CD151P48509 253 aa17.08■□□□□ 0.32
NUP50-218ENST00000493456 DYNLT1P63172 113 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms