RNA–Protein interactions for RNA: ENST00000492601.2

SGMS1-204, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-204ENST00000492601 ZNF658BQ4V348 819 aaPredicted RBP16.78■□□□□ 0.28
SGMS1-204ENST00000492601 CCDC38Q502W7 563 aa16.78■□□□□ 0.28
SGMS1-204ENST00000492601 COLEC12Q5KU26 742 aa16.78■□□□□ 0.28
SGMS1-204ENST00000492601 TMTC4Q5T4D3 741 aa16.78■□□□□ 0.28
SGMS1-204ENST00000492601 BPHLQ86WA6 291 aaPredicted RBP16.78■□□□□ 0.28
SGMS1-204ENST00000492601 TMEM126BQ8IUX1 230 aa16.78■□□□□ 0.28
SGMS1-204ENST00000492601 STYXQ8WUJ0 223 aa16.78■□□□□ 0.28
SGMS1-204ENST00000492601 ZNF501Q96CX3 271 aaPredicted RBP16.78■□□□□ 0.28
SGMS1-204ENST00000492601 HES6Q96HZ4 224 aa16.78■□□□□ 0.28
SGMS1-204ENST00000492601 ALS2CR12Q96Q35 445 aa16.78■□□□□ 0.28
SGMS1-204ENST00000492601 ACTL8Q9H568 366 aa16.78■□□□□ 0.28
SGMS1-204ENST00000492601 VPS37BQ9H9H4 285 aa16.78■□□□□ 0.28
SGMS1-204ENST00000492601 SMARCAL1Q9NZC9 954 aa16.78■□□□□ 0.28
SGMS1-204ENST00000492601 POMT2Q9UKY4 750 aa16.78■□□□□ 0.28
SGMS1-204ENST00000492601 POLHQ9Y253 713 aa16.78■□□□□ 0.28
SGMS1-204ENST00000492601 PRSS21Q9Y6M0 314 aa16.78■□□□□ 0.28
SGMS1-204ENST00000492601 ANKRD12Q6UB98 2062 aa16.77■□□□□ 0.28
SGMS1-204ENST00000492601 SPENQ96T58 3664 aaKnown RBP16.77■□□□□ 0.28
SGMS1-204ENST00000492601 OR51F1A6NGY5 319 aa16.77■□□□□ 0.28
SGMS1-204ENST00000492601 BTN3A3O00478 584 aa16.77■□□□□ 0.28
SGMS1-204ENST00000492601 PSMD3O43242 534 aa16.77■□□□□ 0.28
SGMS1-204ENST00000492601 CPNE3O75131 537 aaKnown RBP16.77■□□□□ 0.28
SGMS1-204ENST00000492601 RPS18P62269 152 aaKnown RBP16.77■□□□□ 0.28
SGMS1-204ENST00000492601 PRKG2Q13237 762 aa16.77■□□□□ 0.28
SGMS1-204ENST00000492601 LACTB2Q53H82 288 aaPredicted RBP16.77■□□□□ 0.28
SGMS1-204ENST00000492601 PRAMEF17Q5VTA0 474 aa16.77■□□□□ 0.28
SGMS1-204ENST00000492601 OR52K1Q8NGK4 314 aa16.77■□□□□ 0.28
SGMS1-204ENST00000492601 HGH1Q9BTY7 390 aa16.77■□□□□ 0.28
SGMS1-204ENST00000492601 EPN3Q9H201 632 aa16.77■□□□□ 0.28
SGMS1-204ENST00000492601 XKR8Q9H6D3 395 aa16.77■□□□□ 0.28
SGMS1-204ENST00000492601 KCND1Q9NSA2 647 aa16.77■□□□□ 0.28
SGMS1-204ENST00000492601 BTRCQ9Y297 605 aa16.77■□□□□ 0.28
SGMS1-204ENST00000492601 PCDHGA6Q9Y5G7 932 aa16.77■□□□□ 0.28
SGMS1-204ENST00000492601 RELNP78509 3460 aa16.76■□□□□ 0.27
SGMS1-204ENST00000492601 MROH6A6NGR9 719 aa16.76■□□□□ 0.27
SGMS1-204ENST00000492601 C21orf140B9A014 251 aa16.76■□□□□ 0.27
SGMS1-204ENST00000492601 BTN3A1O00481 513 aa16.76■□□□□ 0.27
SGMS1-204ENST00000492601 NR1D1P20393 614 aa16.76■□□□□ 0.27
SGMS1-204ENST00000492601 MSNP26038 577 aaKnown RBP16.76■□□□□ 0.27
SGMS1-204ENST00000492601 GPS2Q13227 327 aa16.76■□□□□ 0.27
SGMS1-204ENST00000492601 ZNF449Q6P9G9 518 aa16.76■□□□□ 0.27
SGMS1-204ENST00000492601 DNAAF3Q8N9W5 541 aa16.76■□□□□ 0.27
SGMS1-204ENST00000492601 SLC38A9Q8NBW4 561 aa16.76■□□□□ 0.27
SGMS1-204ENST00000492601 OR52E1Q8NGJ3 308 aa16.76■□□□□ 0.27
SGMS1-204ENST00000492601 TFGQ92734 400 aaPredicted RBP16.76■□□□□ 0.27
SGMS1-204ENST00000492601 MR1Q95460 341 aa16.76■□□□□ 0.27
SGMS1-204ENST00000492601 KLHL25Q9H0H3 589 aa16.76■□□□□ 0.27
SGMS1-204ENST00000492601 C1GALT1Q9NS00 363 aa16.76■□□□□ 0.27
SGMS1-204ENST00000492601 IMPACTQ9P2X3 320 aa16.76■□□□□ 0.27
SGMS1-204ENST00000492601 TP53TG5Q9Y2B4 290 aa16.76■□□□□ 0.27
SGMS1-204ENST00000492601 MAN2B2Q9Y2E5 1009 aa16.76■□□□□ 0.27
SGMS1-204ENST00000492601 PRRC2CQ9Y520 2896 aaKnown RBP16.75■□□□□ 0.27
SGMS1-204ENST00000492601 CCDC162PA2VCL2 907 aa16.75■□□□□ 0.27
SGMS1-204ENST00000492601 K7EM74 188 aa16.75■□□□□ 0.27
SGMS1-204ENST00000492601 IFNB1P01574 187 aa16.75■□□□□ 0.27
SGMS1-204ENST00000492601 ST6GAL1P15907 406 aa16.75■□□□□ 0.27
SGMS1-204ENST00000492601 PRDX3P30048 256 aaKnown RBP16.75■□□□□ 0.27
SGMS1-204ENST00000492601 CDC25BP30305 580 aa16.75■□□□□ 0.27
SGMS1-204ENST00000492601 CD151P48509 253 aa16.75■□□□□ 0.27
SGMS1-204ENST00000492601 LMAN1P49257 510 aa16.75■□□□□ 0.27
SGMS1-204ENST00000492601 RPA4Q13156 261 aa16.75■□□□□ 0.27
SGMS1-204ENST00000492601 BRD3Q15059 726 aa16.75■□□□□ 0.27
SGMS1-204ENST00000492601 SEL1L2Q5TEA6 688 aa16.75■□□□□ 0.27
SGMS1-204ENST00000492601 NAPRTQ6XQN6 538 aa16.75■□□□□ 0.27
SGMS1-204ENST00000492601 PRUNE1Q86TP1 453 aa16.75■□□□□ 0.27
SGMS1-204ENST00000492601 LINC00523Q86TU6 105 aa16.75■□□□□ 0.27
SGMS1-204ENST00000492601 CARFQ8N187 725 aa16.75■□□□□ 0.27
SGMS1-204ENST00000492601 OR8K5Q8NH50 307 aa16.75■□□□□ 0.27
SGMS1-204ENST00000492601 ELMO1Q92556 727 aa16.75■□□□□ 0.27
SGMS1-204ENST00000492601 TFB2MQ9H5Q4 396 aaKnown RBP16.75■□□□□ 0.27
SGMS1-204ENST00000492601 MVB12BQ9H7P6 319 aa16.75■□□□□ 0.27
SGMS1-204ENST00000492601 FANCEQ9HB96 536 aa16.75■□□□□ 0.27
SGMS1-204ENST00000492601 ETNK1Q9HBU6 452 aa16.75■□□□□ 0.27
SGMS1-204ENST00000492601 ANAPC2Q9UJX6 822 aa16.75■□□□□ 0.27
SGMS1-204ENST00000492601 GUCA1BQ9UMX6 200 aa16.75■□□□□ 0.27
SGMS1-204ENST00000492601 LRRK2Q5S007 2527 aa16.75■□□□□ 0.27
SGMS1-204ENST00000492601 TMEM150CB9EJG8 249 aa16.74■□□□□ 0.27
SGMS1-204ENST00000492601 MKRN2OSH3BPM6 223 aa16.74■□□□□ 0.27
SGMS1-204ENST00000492601 MATN2O00339 956 aa16.74■□□□□ 0.27
SGMS1-204ENST00000492601 LIASO43766 372 aa16.74■□□□□ 0.27
SGMS1-204ENST00000492601 RFPL1O75677 317 aa16.74■□□□□ 0.27
SGMS1-204ENST00000492601 AP2A2O94973 939 aa16.74■□□□□ 0.27
SGMS1-204ENST00000492601 ETS1P14921 441 aa16.74■□□□□ 0.27
SGMS1-204ENST00000492601 PVRP15151 417 aa16.74■□□□□ 0.27
SGMS1-204ENST00000492601 PTPN4P29074 926 aa16.74■□□□□ 0.27
SGMS1-204ENST00000492601 FOXN2P32314 431 aa16.74■□□□□ 0.27
SGMS1-204ENST00000492601 CASRP41180 1078 aa16.74■□□□□ 0.27
SGMS1-204ENST00000492601 GRIA1P42261 906 aa16.74■□□□□ 0.27
SGMS1-204ENST00000492601 NSG1P42857 185 aa16.74■□□□□ 0.27
SGMS1-204ENST00000492601 RPS15P62841 145 aaKnown RBP16.74■□□□□ 0.27
SGMS1-204ENST00000492601 CDH17Q12864 832 aa16.74■□□□□ 0.27
SGMS1-204ENST00000492601 ABRQ12979 859 aa16.74■□□□□ 0.27
SGMS1-204ENST00000492601 SNX1Q13596 522 aa16.74■□□□□ 0.27
SGMS1-204ENST00000492601 BOP1Q14137 746 aaKnown RBP16.74■□□□□ 0.27
SGMS1-204ENST00000492601 OASLQ15646 514 aaKnown RBP16.74■□□□□ 0.27
SGMS1-204ENST00000492601 PPP1R21Q6ZMI0 780 aa16.74■□□□□ 0.27
SGMS1-204ENST00000492601 AMIGO1Q86WK6 493 aa16.74■□□□□ 0.27
SGMS1-204ENST00000492601 RNF10Q8N5U6 811 aaKnown RBP16.74■□□□□ 0.27
SGMS1-204ENST00000492601 OR5AR1Q8NGP9 310 aa16.74■□□□□ 0.27
SGMS1-204ENST00000492601 OR1L3Q8NH93 324 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms