RNA–Protein interactions for RNA: ENST00000489303.1

LMO4-203, Transcript of LIM domain only 4, humanhuman

TSL 2

Gene LMO4, Length 952 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-203ENST00000489303 SRMSQ9H3Y6 488 aa13.16□□□□□ -0.3
LMO4-203ENST00000489303 MRM3Q9HC36 420 aaKnown RBP13.16□□□□□ -0.3
LMO4-203ENST00000489303 SAMD15Q9P1V8 674 aa13.16□□□□□ -0.3
LMO4-203ENST00000489303 PRSS21Q9Y6M0 314 aa13.16□□□□□ -0.3
LMO4-203ENST00000489303 ZNF106Q9H2Y7 1883 aaKnown RBP13.16□□□□□ -0.3
LMO4-203ENST00000489303 MAGEB16A2A368 324 aa13.15□□□□□ -0.3
LMO4-203ENST00000489303 OR6C74A6NCV1 312 aa13.15□□□□□ -0.3
LMO4-203ENST00000489303 J3QKU1 62 aa13.15□□□□□ -0.3
LMO4-203ENST00000489303 MATN2O00339 956 aa13.15□□□□□ -0.3
LMO4-203ENST00000489303 KDM1AO60341 852 aa13.15□□□□□ -0.3
LMO4-203ENST00000489303 OR1I1O60431 355 aa13.15□□□□□ -0.3
LMO4-203ENST00000489303 NDUFS3O75489 264 aa13.15□□□□□ -0.3
LMO4-203ENST00000489303 MLNP12872 115 aa13.15□□□□□ -0.3
LMO4-203ENST00000489303 PDHA2P29803 388 aa13.15□□□□□ -0.3
LMO4-203ENST00000489303 MAGEA6P43360 314 aa13.15□□□□□ -0.3
LMO4-203ENST00000489303 PREPP48147 710 aa13.15□□□□□ -0.3
LMO4-203ENST00000489303 GNG11P61952 73 aa13.15□□□□□ -0.3
LMO4-203ENST00000489303 CRADDP78560 199 aa13.15□□□□□ -0.3
LMO4-203ENST00000489303 BOP1Q14137 746 aaKnown RBP13.15□□□□□ -0.3
LMO4-203ENST00000489303 IL11RAQ14626 422 aa13.15□□□□□ -0.3
LMO4-203ENST00000489303 KCNJ11Q14654 390 aa13.15□□□□□ -0.3
LMO4-203ENST00000489303 BRD3Q15059 726 aa13.15□□□□□ -0.3
LMO4-203ENST00000489303 PPP1R7Q15435 360 aa13.15□□□□□ -0.3
LMO4-203ENST00000489303 PTRHD1Q6GMV3 140 aaKnown RBP13.15□□□□□ -0.3
LMO4-203ENST00000489303 MRNIPQ6NTE8 343 aa13.15□□□□□ -0.3
LMO4-203ENST00000489303 MICALCLQ6ZW33 695 aa13.15□□□□□ -0.3
LMO4-203ENST00000489303 ZNF534Q76KX8 674 aa13.15□□□□□ -0.3
LMO4-203ENST00000489303 KMT5CQ86Y97 462 aa13.15□□□□□ -0.3
LMO4-203ENST00000489303 CARFQ8N187 725 aa13.15□□□□□ -0.3
LMO4-203ENST00000489303 SIDT2Q8NBJ9 832 aaKnown RBP13.15□□□□□ -0.3
LMO4-203ENST00000489303 OR4E2Q8NGC2 313 aa13.15□□□□□ -0.3
LMO4-203ENST00000489303 KLHL6Q8WZ60 621 aa13.15□□□□□ -0.3
LMO4-203ENST00000489303 KIFC1Q9BW19 673 aa13.15□□□□□ -0.3
LMO4-203ENST00000489303 TRIT1Q9H3H1 467 aaKnown RBP13.15□□□□□ -0.3
LMO4-203ENST00000489303 XAB2Q9HCS7 855 aaKnown RBP13.15□□□□□ -0.3
LMO4-203ENST00000489303 PDE7BQ9NP56 450 aa13.15□□□□□ -0.3
LMO4-203ENST00000489303 TREX1Q9NSU2 369 aa13.15□□□□□ -0.3
LMO4-203ENST00000489303 SYBUQ9NX95 663 aa13.15□□□□□ -0.3
LMO4-203ENST00000489303 SOX13Q9UN79 622 aa13.15□□□□□ -0.3
LMO4-203ENST00000489303 COL6A6A6NMZ7 2263 aa13.14□□□□□ -0.31
LMO4-203ENST00000489303 TCRBV7S3A2A0A539 114 aa13.14□□□□□ -0.31
LMO4-203ENST00000489303 TLCD2A6NGC4 264 aa13.14□□□□□ -0.31
LMO4-203ENST00000489303 B8ZZF3 427 aa13.14□□□□□ -0.31
LMO4-203ENST00000489303 PRMT5O14744 637 aaPredicted RBP13.14□□□□□ -0.31
LMO4-203ENST00000489303 MAP3K7O43318 606 aa13.14□□□□□ -0.31
LMO4-203ENST00000489303 KIF1CO43896 1103 aaKnown RBP13.14□□□□□ -0.31
LMO4-203ENST00000489303 RAD1O60671 282 aa13.14□□□□□ -0.31
LMO4-203ENST00000489303 VAPBO95292 243 aa13.14□□□□□ -0.31
LMO4-203ENST00000489303 NELFEP18615 380 aaKnown RBP13.14□□□□□ -0.31
LMO4-203ENST00000489303 MAP4P27816 1152 aaKnown RBP13.14□□□□□ -0.31
LMO4-203ENST00000489303 NMBRP28336 390 aa13.14□□□□□ -0.31
LMO4-203ENST00000489303 TMED2Q15363 201 aa13.14□□□□□ -0.31
LMO4-203ENST00000489303 ZNF658BQ4V348 819 aaPredicted RBP13.14□□□□□ -0.31
LMO4-203ENST00000489303 TMTC4Q5T4D3 741 aa13.14□□□□□ -0.31
LMO4-203ENST00000489303 XKR5Q6UX68 686 aa13.14□□□□□ -0.31
LMO4-203ENST00000489303 LRRC6Q86X45 466 aa13.14□□□□□ -0.31
LMO4-203ENST00000489303 RASGRP3Q8IV61 690 aa13.14□□□□□ -0.31
LMO4-203ENST00000489303 CACNA2D3Q8IZS8 1091 aa13.14□□□□□ -0.31
LMO4-203ENST00000489303 NLGN4XQ8N0W4 816 aa13.14□□□□□ -0.31
LMO4-203ENST00000489303 MCUQ8NE86 351 aa13.14□□□□□ -0.31
LMO4-203ENST00000489303 NLGN4YQ8NFZ3 816 aaPredicted RBP13.14□□□□□ -0.31
LMO4-203ENST00000489303 GSDMBQ8TAX9 411 aa13.14□□□□□ -0.31
LMO4-203ENST00000489303 ASZ1Q8WWH4 475 aa13.14□□□□□ -0.31
LMO4-203ENST00000489303 CPT1BQ92523 772 aa13.14□□□□□ -0.31
LMO4-203ENST00000489303 KIAA1143Q96AT1 154 aaPredicted RBP13.14□□□□□ -0.31
LMO4-203ENST00000489303 MED8Q96G25 268 aa13.14□□□□□ -0.31
LMO4-203ENST00000489303 PANX3Q96QZ0 392 aa13.14□□□□□ -0.31
LMO4-203ENST00000489303 OR6C1Q96RD1 312 aa13.14□□□□□ -0.31
LMO4-203ENST00000489303 CARD6Q9BX69 1037 aa13.14□□□□□ -0.31
LMO4-203ENST00000489303 TFB2MQ9H5Q4 396 aaKnown RBP13.14□□□□□ -0.31
LMO4-203ENST00000489303 ASH1LQ9NR48 2969 aaKnown RBP13.14□□□□□ -0.31
LMO4-203ENST00000489303 SIDT1Q9NXL6 827 aaKnown RBP13.14□□□□□ -0.31
LMO4-203ENST00000489303 POLG2Q9UHN1 485 aa13.14□□□□□ -0.31
LMO4-203ENST00000489303 GNPTGQ9UJJ9 305 aa13.14□□□□□ -0.31
LMO4-203ENST00000489303 ASF1AQ9Y294 204 aa13.14□□□□□ -0.31
LMO4-203ENST00000489303 AHCTF1Q8WYP5 2266 aa13.14□□□□□ -0.31
LMO4-203ENST00000489303 BSNQ9UPA5 3926 aa13.13□□□□□ -0.31
LMO4-203ENST00000489303 SDK2Q58EX2 2172 aa13.13□□□□□ -0.31
LMO4-203ENST00000489303 GSAPA4D1B5 854 aa13.13□□□□□ -0.31
LMO4-203ENST00000489303 SDR42E2A6NKP2 422 aa13.13□□□□□ -0.31
LMO4-203ENST00000489303 KPNA5O15131 536 aa13.13□□□□□ -0.31
LMO4-203ENST00000489303 ZNF185O15231 689 aa13.13□□□□□ -0.31
LMO4-203ENST00000489303 STK17BO94768 372 aa13.13□□□□□ -0.31
LMO4-203ENST00000489303 APOA4P06727 396 aa13.13□□□□□ -0.31
LMO4-203ENST00000489303 ITGB6P18564 788 aa13.13□□□□□ -0.31
LMO4-203ENST00000489303 POLR2CP19387 275 aaPredicted RBP13.13□□□□□ -0.31
LMO4-203ENST00000489303 ACY1Q03154 408 aa13.13□□□□□ -0.31
LMO4-203ENST00000489303 RNF187Q5TA31 235 aaPredicted RBP13.13□□□□□ -0.31
LMO4-203ENST00000489303 LDB1Q86U70 411 aaPredicted RBP13.13□□□□□ -0.31
LMO4-203ENST00000489303 HOOK3Q86VS8 718 aa13.13□□□□□ -0.31
LMO4-203ENST00000489303 BPHLQ86WA6 291 aaPredicted RBP13.13□□□□□ -0.31
LMO4-203ENST00000489303 AMIGO1Q86WK6 493 aa13.13□□□□□ -0.31
LMO4-203ENST00000489303 PPP1R3BQ86XI6 285 aa13.13□□□□□ -0.31
LMO4-203ENST00000489303 TBC1D21Q8IYX1 336 aa13.13□□□□□ -0.31
LMO4-203ENST00000489303 PHC3Q8NDX5 983 aa13.13□□□□□ -0.31
LMO4-203ENST00000489303 OR52E1Q8NGJ3 308 aa13.13□□□□□ -0.31
LMO4-203ENST00000489303 NKD1Q969G9 470 aa13.13□□□□□ -0.31
LMO4-203ENST00000489303 MFSD3Q96ES6 412 aa13.13□□□□□ -0.31
LMO4-203ENST00000489303 SLC41A2Q96JW4 573 aa13.13□□□□□ -0.31
LMO4-203ENST00000489303 RUNDC3BQ96NL0 473 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms