RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 TRIM58Q8NG06 486 aa13.63□□□□□ -0.23
VTI1A-206ENST00000489142 OR52E1Q8NGJ3 308 aa13.63□□□□□ -0.23
VTI1A-206ENST00000489142 OR5AR1Q8NGP9 310 aa13.63□□□□□ -0.23
VTI1A-206ENST00000489142 LKAAEAR1Q8TD35 194 aa13.63□□□□□ -0.23
VTI1A-206ENST00000489142 STARD8Q92502 1023 aa13.63□□□□□ -0.23
VTI1A-206ENST00000489142 RANBP9Q96S59 729 aa13.63□□□□□ -0.23
VTI1A-206ENST00000489142 CHRAC1Q9NRG0 131 aa13.63□□□□□ -0.23
VTI1A-206ENST00000489142 SOHLH2Q9NX45 425 aa13.63□□□□□ -0.23
VTI1A-206ENST00000489142 SEMA5BQ9P283 1151 aa13.63□□□□□ -0.23
VTI1A-206ENST00000489142 MARCH4Q9P2E8 410 aaPredicted RBP13.63□□□□□ -0.23
VTI1A-206ENST00000489142 RARRES3Q9UL19 164 aa13.63□□□□□ -0.23
VTI1A-206ENST00000489142 TTC7AQ9ULT0 858 aaPredicted RBP13.63□□□□□ -0.23
VTI1A-206ENST00000489142 SNRNP200O75643 2136 aaKnown RBP13.63□□□□□ -0.23
VTI1A-206ENST00000489142 SPTBP11277 2137 aa13.63□□□□□ -0.23
VTI1A-206ENST00000489142 TCRBV7S3A2A0A539 114 aa13.62□□□□□ -0.23
VTI1A-206ENST00000489142 SLC9B1P1A6NJY1 282 aa13.62□□□□□ -0.23
VTI1A-206ENST00000489142 IQCF5A8MTL0 148 aa13.62□□□□□ -0.23
VTI1A-206ENST00000489142 KATNA1O75449 491 aa13.62□□□□□ -0.23
VTI1A-206ENST00000489142 AP2A2O94973 939 aa13.62□□□□□ -0.23
VTI1A-206ENST00000489142 ZIC2O95409 532 aaPredicted RBP13.62□□□□□ -0.23
VTI1A-206ENST00000489142 PVRP15151 417 aa13.62□□□□□ -0.23
VTI1A-206ENST00000489142 CDH3P22223 829 aa13.62□□□□□ -0.23
VTI1A-206ENST00000489142 NDUFS1P28331 727 aa13.62□□□□□ -0.23
VTI1A-206ENST00000489142 OAS2P29728 719 aaKnown RBP13.62□□□□□ -0.23
VTI1A-206ENST00000489142 PRAMEP78395 509 aa13.62□□□□□ -0.23
VTI1A-206ENST00000489142 HSD11B2P80365 405 aa13.62□□□□□ -0.23
VTI1A-206ENST00000489142 CDC20Q12834 499 aa13.62□□□□□ -0.23
VTI1A-206ENST00000489142 PRKAA1Q13131 559 aa13.62□□□□□ -0.23
VTI1A-206ENST00000489142 ITIH4Q14624 930 aa13.62□□□□□ -0.23
VTI1A-206ENST00000489142 SYTL3Q4VX76 610 aa13.62□□□□□ -0.23
VTI1A-206ENST00000489142 PRAMEF17Q5VTA0 474 aa13.62□□□□□ -0.23
VTI1A-206ENST00000489142 DRICH1Q6PGQ1 229 aaPredicted RBP13.62□□□□□ -0.23
VTI1A-206ENST00000489142 OR4L1Q8NH43 312 aa13.62□□□□□ -0.23
VTI1A-206ENST00000489142 ZFPM2Q8WW38 1151 aa13.62□□□□□ -0.23
VTI1A-206ENST00000489142 TFGQ92734 400 aaPredicted RBP13.62□□□□□ -0.23
VTI1A-206ENST00000489142 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.62□□□□□ -0.23
VTI1A-206ENST00000489142 MS4A14Q96JA4 679 aa13.62□□□□□ -0.23
VTI1A-206ENST00000489142 SLC45A3Q96JT2 553 aa13.62□□□□□ -0.23
VTI1A-206ENST00000489142 RUFY1Q96T51 708 aa13.62□□□□□ -0.23
VTI1A-206ENST00000489142 CD180Q99467 661 aa13.62□□□□□ -0.23
VTI1A-206ENST00000489142 TRIT1Q9H3H1 467 aaKnown RBP13.62□□□□□ -0.23
VTI1A-206ENST00000489142 AKIRIN1Q9H9L7 192 aaPredicted RBP13.62□□□□□ -0.23
VTI1A-206ENST00000489142 PDE7BQ9NP56 450 aa13.62□□□□□ -0.23
VTI1A-206ENST00000489142 FGF21Q9NSA1 209 aa13.62□□□□□ -0.23
VTI1A-206ENST00000489142 PLAGL1Q9UM63 463 aa13.62□□□□□ -0.23
VTI1A-206ENST00000489142 ICKQ9UPZ9 632 aa13.62□□□□□ -0.23
VTI1A-206ENST00000489142 DRG1Q9Y295 367 aaKnown RBP13.62□□□□□ -0.23
VTI1A-206ENST00000489142 ZBTB11O95625 1053 aaPredicted RBP13.61□□□□□ -0.23
VTI1A-206ENST00000489142 FTH1P02794 183 aa13.61□□□□□ -0.23
VTI1A-206ENST00000489142 NMBRP28336 390 aa13.61□□□□□ -0.23
VTI1A-206ENST00000489142 ACVR1Q04771 509 aa13.61□□□□□ -0.23
VTI1A-206ENST00000489142 RPA4Q13156 261 aa13.61□□□□□ -0.23
VTI1A-206ENST00000489142 MAP7Q14244 749 aa13.61□□□□□ -0.23
VTI1A-206ENST00000489142 DEFB109BQ30KR1 87 aa13.61□□□□□ -0.23
VTI1A-206ENST00000489142 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.61□□□□□ -0.23
VTI1A-206ENST00000489142 FASTKD1Q53R41 847 aaKnown RBP13.61□□□□□ -0.23
VTI1A-206ENST00000489142 ZNF449Q6P9G9 518 aa13.61□□□□□ -0.23
VTI1A-206ENST00000489142 FAM199XQ6PEV8 388 aaPredicted RBP13.61□□□□□ -0.23
VTI1A-206ENST00000489142 BORAQ6PGQ7 559 aa13.61□□□□□ -0.23
VTI1A-206ENST00000489142 CES3Q6UWW8 571 aa13.61□□□□□ -0.23
VTI1A-206ENST00000489142 KRT222Q8N1A0 295 aa13.61□□□□□ -0.23
VTI1A-206ENST00000489142 D2HGDHQ8N465 521 aa13.61□□□□□ -0.23
VTI1A-206ENST00000489142 PRELID2Q8N945 189 aa13.61□□□□□ -0.23
VTI1A-206ENST00000489142 CT55Q8WUE5 264 aa13.61□□□□□ -0.23
VTI1A-206ENST00000489142 MVB12BQ9H7P6 319 aa13.61□□□□□ -0.23
VTI1A-206ENST00000489142 SYBUQ9NX95 663 aa13.61□□□□□ -0.23
VTI1A-206ENST00000489142 CIDEBQ9UHD4 219 aa13.61□□□□□ -0.23
VTI1A-206ENST00000489142 POMT2Q9UKY4 750 aa13.61□□□□□ -0.23
VTI1A-206ENST00000489142 ASF1AQ9Y294 204 aa13.61□□□□□ -0.23
VTI1A-206ENST00000489142 TDRKHQ9Y2W6 561 aaKnown RBP13.61□□□□□ -0.23
VTI1A-206ENST00000489142 BHMG1C9JSJ3 638 aaPredicted RBP13.6□□□□□ -0.23
VTI1A-206ENST00000489142 LIN7AO14910 233 aaPredicted RBP13.6□□□□□ -0.23
VTI1A-206ENST00000489142 FURINP09958 794 aa13.6□□□□□ -0.23
VTI1A-206ENST00000489142 OR56A5P0C7T3 313 aa13.6□□□□□ -0.23
VTI1A-206ENST00000489142 ST6GAL1P15907 406 aa13.6□□□□□ -0.23
VTI1A-206ENST00000489142 TCN2P20062 427 aa13.6□□□□□ -0.23
VTI1A-206ENST00000489142 MGAT1P26572 445 aa13.6□□□□□ -0.23
VTI1A-206ENST00000489142 PRDX3P30048 256 aaKnown RBP13.6□□□□□ -0.23
VTI1A-206ENST00000489142 CD151P48509 253 aa13.6□□□□□ -0.23
VTI1A-206ENST00000489142 POLE2P56282 527 aa13.6□□□□□ -0.23
VTI1A-206ENST00000489142 TUBB4BP68371 445 aa13.6□□□□□ -0.23
VTI1A-206ENST00000489142 ACY1Q03154 408 aa13.6□□□□□ -0.23
VTI1A-206ENST00000489142 LAMB3Q13751 1172 aa13.6□□□□□ -0.23
VTI1A-206ENST00000489142 TUBB2AQ13885 445 aa13.6□□□□□ -0.23
VTI1A-206ENST00000489142 ERV3-1Q14264 604 aa13.6□□□□□ -0.23
VTI1A-206ENST00000489142 PCID2Q5JVF3 399 aa13.6□□□□□ -0.23
VTI1A-206ENST00000489142 TTC27Q6P3X3 843 aa13.6□□□□□ -0.23
VTI1A-206ENST00000489142 PRICKLE2Q7Z3G6 844 aa13.6□□□□□ -0.23
VTI1A-206ENST00000489142 TMEM135Q86UB9 458 aa13.6□□□□□ -0.23
VTI1A-206ENST00000489142 TRIM73Q86UV7 250 aa13.6□□□□□ -0.23
VTI1A-206ENST00000489142 AMIGO1Q86WK6 493 aa13.6□□□□□ -0.23
VTI1A-206ENST00000489142 KMT5CQ86Y97 462 aa13.6□□□□□ -0.23
VTI1A-206ENST00000489142 TMEM126BQ8IUX1 230 aa13.6□□□□□ -0.23
VTI1A-206ENST00000489142 VRK3Q8IV63 474 aa13.6□□□□□ -0.23
VTI1A-206ENST00000489142 ADGRF3Q8IZF5 1079 aa13.6□□□□□ -0.23
VTI1A-206ENST00000489142 LMNTD1Q8N9Z9 388 aa13.6□□□□□ -0.23
VTI1A-206ENST00000489142 UBE2Q2Q8WVN8 375 aa13.6□□□□□ -0.23
VTI1A-206ENST00000489142 MAIP1Q8WWC4 291 aa13.6□□□□□ -0.23
VTI1A-206ENST00000489142 ZNF501Q96CX3 271 aaPredicted RBP13.6□□□□□ -0.23
VTI1A-206ENST00000489142 TUBB2BQ9BVA1 445 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms