RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 EIPR1Q53HC9 387 aa2.06□□□□□ -2.08
CCDC93-209ENST00000488908 LYSMD4Q5XG99 296 aa2.06□□□□□ -2.08
CCDC93-209ENST00000488908 IGFL3Q6UXB1 125 aa2.06□□□□□ -2.08
CCDC93-209ENST00000488908 SEPT14Q6ZU15 432 aa2.06□□□□□ -2.08
CCDC93-209ENST00000488908 CEACAM19Q7Z692 300 aa2.06□□□□□ -2.08
CCDC93-209ENST00000488908 SLC25A42Q86VD7 318 aa2.06□□□□□ -2.08
CCDC93-209ENST00000488908 CPOQ8IVL8 374 aa2.06□□□□□ -2.08
CCDC93-209ENST00000488908 AQP11Q8NBQ7 271 aa2.06□□□□□ -2.08
CCDC93-209ENST00000488908 OR8K5Q8NH50 307 aa2.06□□□□□ -2.08
CCDC93-209ENST00000488908 TYMSOSQ8TAI1 123 aa2.06□□□□□ -2.08
CCDC93-209ENST00000488908 KCNG4Q8TDN1 519 aa2.06□□□□□ -2.08
CCDC93-209ENST00000488908 SEPT5Q99719 369 aaPredicted RBP2.06□□□□□ -2.08
CCDC93-209ENST00000488908 RANGRFQ9HD47 186 aaPredicted RBP2.06□□□□□ -2.08
CCDC93-209ENST00000488908 TRMT1Q9NXH9 659 aaKnown RBP2.06□□□□□ -2.08
CCDC93-209ENST00000488908 CTSZQ9UBR2 303 aa2.06□□□□□ -2.08
CCDC93-209ENST00000488908 TAGLN3Q9UI15 199 aa2.06□□□□□ -2.08
CCDC93-209ENST00000488908 DBNLQ9UJU6 430 aaKnown RBP2.06□□□□□ -2.08
CCDC93-209ENST00000488908 VSIG4Q9Y279 399 aa2.06□□□□□ -2.08
CCDC93-209ENST00000488908 ZNF510Q9Y2H8 683 aa2.06□□□□□ -2.08
CCDC93-209ENST00000488908 TRIOBPQ9H2D6 2365 aa2.05□□□□□ -2.08
CCDC93-209ENST00000488908 A0A087WUV0 522 aaPredicted RBP2.05□□□□□ -2.08
CCDC93-209ENST00000488908 SRRM4A7MD48 611 aaKnown RBP2.05□□□□□ -2.08
CCDC93-209ENST00000488908 SMAD9O15198 467 aaKnown RBP2.05□□□□□ -2.08
CCDC93-209ENST00000488908 PPM1GO15355 546 aaPredicted RBP2.05□□□□□ -2.08
CCDC93-209ENST00000488908 TMCC2O75069 709 aa2.05□□□□□ -2.08
CCDC93-209ENST00000488908 PAFAH1B1P43034 410 aa2.05□□□□□ -2.08
CCDC93-209ENST00000488908 GALNT2Q10471 571 aa2.05□□□□□ -2.08
CCDC93-209ENST00000488908 PTP4A2Q12974 167 aa2.05□□□□□ -2.08
CCDC93-209ENST00000488908 PRICKLE4Q2TBC4 344 aa2.05□□□□□ -2.08
CCDC93-209ENST00000488908 SOWAHCQ53LP3 525 aaPredicted RBP2.05□□□□□ -2.08
CCDC93-209ENST00000488908 LRIF1Q5T3J3 769 aa2.05□□□□□ -2.08
CCDC93-209ENST00000488908 ADALQ6DHV7 355 aa2.05□□□□□ -2.08
CCDC93-209ENST00000488908 CDC73Q6P1J9 531 aa2.05□□□□□ -2.08
CCDC93-209ENST00000488908 KIF6Q6ZMV9 814 aa2.05□□□□□ -2.08
CCDC93-209ENST00000488908 ZNF841Q6ZN19 808 aa2.05□□□□□ -2.08
CCDC93-209ENST00000488908 INTS8Q75QN2 995 aaKnown RBP2.05□□□□□ -2.08
CCDC93-209ENST00000488908 CEP97Q8IW35 865 aa2.05□□□□□ -2.08
CCDC93-209ENST00000488908 RNF168Q8IYW5 571 aaPredicted RBP2.05□□□□□ -2.08
CCDC93-209ENST00000488908 KIRREL3Q8IZU9 778 aa2.05□□□□□ -2.08
CCDC93-209ENST00000488908 MAPKAPK5-AS1Q8N8E1 139 aa2.05□□□□□ -2.08
CCDC93-209ENST00000488908 KLHL30-AS1Q8NEE0 82 aa2.05□□□□□ -2.08
CCDC93-209ENST00000488908 VANGL1Q8TAA9 524 aaPredicted RBP2.05□□□□□ -2.08
CCDC93-209ENST00000488908 CHPT1Q8WUD6 406 aa2.05□□□□□ -2.08
CCDC93-209ENST00000488908 B3GALT6Q96L58 329 aa2.05□□□□□ -2.08
CCDC93-209ENST00000488908 SLITRK2Q9H156 845 aa2.05□□□□□ -2.08
CCDC93-209ENST00000488908 MED20Q9H944 212 aa2.05□□□□□ -2.08
CCDC93-209ENST00000488908 TNFRSF19Q9NS68 423 aa2.05□□□□□ -2.08
CCDC93-209ENST00000488908 TBX20Q9UMR3 447 aa2.05□□□□□ -2.08
CCDC93-209ENST00000488908 R3HDM2Q9Y2K5 976 aaKnown RBP2.05□□□□□ -2.08
CCDC93-209ENST00000488908 SPIN1Q9Y657 262 aaPredicted RBP2.05□□□□□ -2.08
CCDC93-209ENST00000488908 ELOVL7A1L3X0 281 aa2.04□□□□□ -2.08
CCDC93-209ENST00000488908 A8MXK9 166 aa2.04□□□□□ -2.08
CCDC93-209ENST00000488908 E9PI62 339 aa2.04□□□□□ -2.08
CCDC93-209ENST00000488908 H3BQ06 376 aaPredicted RBP2.04□□□□□ -2.08
CCDC93-209ENST00000488908 HPP00738 406 aa2.04□□□□□ -2.08
CCDC93-209ENST00000488908 THEGLP0DJG4 465 aa2.04□□□□□ -2.08
CCDC93-209ENST00000488908 TFAP4Q01664 338 aa2.04□□□□□ -2.08
CCDC93-209ENST00000488908 FRG1Q14331 258 aaKnown RBP2.04□□□□□ -2.08
CCDC93-209ENST00000488908 C3AR1Q16581 482 aa2.04□□□□□ -2.08
CCDC93-209ENST00000488908 KLHL26Q53HC5 615 aa2.04□□□□□ -2.08
CCDC93-209ENST00000488908 PRR30Q53SZ7 412 aaPredicted RBP2.04□□□□□ -2.08
CCDC93-209ENST00000488908 GCNT6Q5T4J0 391 aa2.04□□□□□ -2.08
CCDC93-209ENST00000488908 RSBN1Q5VWQ0 802 aaPredicted RBP2.04□□□□□ -2.08
CCDC93-209ENST00000488908 KRTAP5-7Q6L8G8 165 aa2.04□□□□□ -2.08
CCDC93-209ENST00000488908 BAIAP2L2Q6UXY1 529 aa2.04□□□□□ -2.08
CCDC93-209ENST00000488908 GALNT5Q7Z7M9 940 aa2.04□□□□□ -2.08
CCDC93-209ENST00000488908 TSPAN33Q86UF1 283 aa2.04□□□□□ -2.08
CCDC93-209ENST00000488908 RTN4RL2Q86UN3 420 aa2.04□□□□□ -2.08
CCDC93-209ENST00000488908 GALNT13Q8IUC8 556 aa2.04□□□□□ -2.08
CCDC93-209ENST00000488908 SPATA5Q8NB90 893 aa2.04□□□□□ -2.08
CCDC93-209ENST00000488908 OR6S1Q8NH40 331 aa2.04□□□□□ -2.08
CCDC93-209ENST00000488908 MAPK15Q8TD08 544 aa2.04□□□□□ -2.08
CCDC93-209ENST00000488908 PSMB7Q99436 277 aa2.04□□□□□ -2.08
CCDC93-209ENST00000488908 STRA6Q9BX79 667 aa2.04□□□□□ -2.08
CCDC93-209ENST00000488908 SLA2Q9H6Q3 261 aa2.04□□□□□ -2.08
CCDC93-209ENST00000488908 SDR39U1Q9NRG7 319 aaPredicted RBP2.04□□□□□ -2.08
CCDC93-209ENST00000488908 TSPYL4Q9UJ04 414 aa2.04□□□□□ -2.08
CCDC93-209ENST00000488908 TNNQ9UQP3 1299 aa2.04□□□□□ -2.08
CCDC93-209ENST00000488908 PAGE4O60829 102 aa2.03□□□□□ -2.08
CCDC93-209ENST00000488908 HNRNPA1P09651 372 aaKnown RBP eCLIP2.03□□□□□ -2.08
CCDC93-209ENST00000488908 CAPGP40121 348 aa2.03□□□□□ -2.08
CCDC93-209ENST00000488908 NDPQ00604 133 aa2.03□□□□□ -2.08
CCDC93-209ENST00000488908 NAB2Q15742 525 aa2.03□□□□□ -2.08
CCDC93-209ENST00000488908 BAK1Q16611 211 aa2.03□□□□□ -2.08
CCDC93-209ENST00000488908 DPCR1Q3MIW9 517 aa2.03□□□□□ -2.08
CCDC93-209ENST00000488908 FAM69AQ5T7M9 428 aa2.03□□□□□ -2.08
CCDC93-209ENST00000488908 BTN2A1Q7KYR7 527 aa2.03□□□□□ -2.08
CCDC93-209ENST00000488908 METTL4Q8N3J2 472 aa2.03□□□□□ -2.08
CCDC93-209ENST00000488908 CPSF7Q8N684 471 aaKnown RBP2.03□□□□□ -2.08
CCDC93-209ENST00000488908 NFKBIDQ8NI38 313 aa2.03□□□□□ -2.08
CCDC93-209ENST00000488908 TRPC4APQ8TEL6 797 aa2.03□□□□□ -2.08
CCDC93-209ENST00000488908 ATP8B4Q8TF62 1192 aa2.03□□□□□ -2.08
CCDC93-209ENST00000488908 SGCDQ92629 289 aa2.03□□□□□ -2.08
CCDC93-209ENST00000488908 SMARCE1Q969G3 411 aa2.03□□□□□ -2.08
CCDC93-209ENST00000488908 ZNF582Q96NG8 517 aaPredicted RBP2.03□□□□□ -2.08
CCDC93-209ENST00000488908 ZNF577Q9BSK1 485 aa2.03□□□□□ -2.08
CCDC93-209ENST00000488908 HEXA-AS1Q9H8Q6 139 aa2.03□□□□□ -2.08
CCDC93-209ENST00000488908 A4GALTQ9NPC4 353 aa2.03□□□□□ -2.08
CCDC93-209ENST00000488908 TSPAN16Q9UKR8 245 aa2.03□□□□□ -2.08
CCDC93-209ENST00000488908 PCDHGB3Q9Y5G1 929 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms