RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 ACAP2Q15057 778 aa6.82□□□□□ -1.32
UBR4-214ENST00000486515 CCDC153Q494R4 210 aa6.82□□□□□ -1.32
UBR4-214ENST00000486515 AASDHQ4L235 1098 aaPredicted RBP6.82□□□□□ -1.32
UBR4-214ENST00000486515 PYCR3Q53H96 274 aa6.82□□□□□ -1.32
UBR4-214ENST00000486515 TRIM61Q5EBN2 209 aa6.82□□□□□ -1.32
UBR4-214ENST00000486515 PRRT3Q5FWE3 981 aa6.82□□□□□ -1.32
UBR4-214ENST00000486515 ZNF789Q5FWF6 425 aa6.82□□□□□ -1.32
UBR4-214ENST00000486515 CTSL3PQ5NE16 218 aa6.82□□□□□ -1.32
UBR4-214ENST00000486515 RBM20Q5T481 1227 aaKnown RBP6.82□□□□□ -1.32
UBR4-214ENST00000486515 KCTD16Q68DU8 428 aa6.82□□□□□ -1.32
UBR4-214ENST00000486515 MTERF4Q7Z6M4 381 aaKnown RBP6.82□□□□□ -1.32
UBR4-214ENST00000486515 CPNE9Q8IYJ1 553 aa6.82□□□□□ -1.32
UBR4-214ENST00000486515 PHC3Q8NDX5 983 aa6.82□□□□□ -1.32
UBR4-214ENST00000486515 CFAP61Q8NHU2 1237 aa6.82□□□□□ -1.32
UBR4-214ENST00000486515 PPP1R14CQ8TAE6 165 aa6.82□□□□□ -1.32
UBR4-214ENST00000486515 STAG3L4Q8TBR4 150 aa6.82□□□□□ -1.32
UBR4-214ENST00000486515 MCOLN3Q8TDD5 553 aa6.82□□□□□ -1.32
UBR4-214ENST00000486515 LMX1AQ8TE12 382 aa6.82□□□□□ -1.32
UBR4-214ENST00000486515 NELL1Q92832 810 aa6.82□□□□□ -1.32
UBR4-214ENST00000486515 ZBTB9Q96C00 473 aa6.82□□□□□ -1.32
UBR4-214ENST00000486515 CXorf40BQ96DE9 158 aa6.82□□□□□ -1.32
UBR4-214ENST00000486515 BIRC8Q96P09 236 aa6.82□□□□□ -1.32
UBR4-214ENST00000486515 ELF4Q99607 663 aaPredicted RBP6.82□□□□□ -1.32
UBR4-214ENST00000486515 EGFL8Q99944 293 aa6.82□□□□□ -1.32
UBR4-214ENST00000486515 PAIP2Q9BPZ3 127 aaKnown RBP6.82□□□□□ -1.32
UBR4-214ENST00000486515 DHRS4Q9BTZ2 278 aa6.82□□□□□ -1.32
UBR4-214ENST00000486515 GTPBP2Q9BX10 602 aaKnown RBP6.82□□□□□ -1.32
UBR4-214ENST00000486515 EPB41L4BQ9H329 900 aa6.82□□□□□ -1.32
UBR4-214ENST00000486515 DPEP2Q9H4A9 486 aa6.82□□□□□ -1.32
UBR4-214ENST00000486515 EBF2Q9HAK2 575 aa6.82□□□□□ -1.32
UBR4-214ENST00000486515 MRPL40Q9NQ50 206 aaKnown RBP6.82□□□□□ -1.32
UBR4-214ENST00000486515 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.82□□□□□ -1.32
UBR4-214ENST00000486515 TSR3Q9UJK0 312 aaKnown RBP6.82□□□□□ -1.32
UBR4-214ENST00000486515 PILRBQ9UKJ0 227 aa6.82□□□□□ -1.32
UBR4-214ENST00000486515 CNOT6Q9ULM6 557 aaKnown RBP6.82□□□□□ -1.32
UBR4-214ENST00000486515 RNF112Q9ULX5 631 aa6.82□□□□□ -1.32
UBR4-214ENST00000486515 TMCO1Q9UM00 188 aa6.82□□□□□ -1.32
UBR4-214ENST00000486515 KCNK6Q9Y257 313 aa6.82□□□□□ -1.32
UBR4-214ENST00000486515 ASF1AQ9Y294 204 aa6.82□□□□□ -1.32
UBR4-214ENST00000486515 PRKAB1Q9Y478 270 aa6.82□□□□□ -1.32
UBR4-214ENST00000486515 NFS1Q9Y697 457 aa6.82□□□□□ -1.32
UBR4-214ENST00000486515 OAS3Q9Y6K5 1087 aaKnown RBP6.82□□□□□ -1.32
UBR4-214ENST00000486515 PRSS21Q9Y6M0 314 aa6.82□□□□□ -1.32
UBR4-214ENST00000486515 DGKBQ9Y6T7 804 aa6.82□□□□□ -1.32
UBR4-214ENST00000486515 COL12A1Q99715 3063 aa6.81□□□□□ -1.32
UBR4-214ENST00000486515 A0A1W2PR77 199 aa6.81□□□□□ -1.32
UBR4-214ENST00000486515 ZNF839A8K0R7 811 aa6.81□□□□□ -1.32
UBR4-214ENST00000486515 BTN3A1O00481 513 aa6.81□□□□□ -1.32
UBR4-214ENST00000486515 GIPC1O14908 333 aa6.81□□□□□ -1.32
UBR4-214ENST00000486515 TM9SF1O15321 606 aa6.81□□□□□ -1.32
UBR4-214ENST00000486515 AQP9O43315 295 aa6.81□□□□□ -1.32
UBR4-214ENST00000486515 KLHL2O95198 593 aa6.81□□□□□ -1.32
UBR4-214ENST00000486515 EPN2O95208 641 aa6.81□□□□□ -1.32
UBR4-214ENST00000486515 ALDOAP04075 364 aaKnown RBP6.81□□□□□ -1.32
UBR4-214ENST00000486515 CSF2P04141 144 aa6.81□□□□□ -1.32
UBR4-214ENST00000486515 MPC1LP0DKB6 136 aa6.81□□□□□ -1.32
UBR4-214ENST00000486515 NME1P15531 152 aaKnown RBP6.81□□□□□ -1.32
UBR4-214ENST00000486515 ZNF37AP17032 561 aaPredicted RBP6.81□□□□□ -1.32
UBR4-214ENST00000486515 AOAHP28039 575 aa6.81□□□□□ -1.32
UBR4-214ENST00000486515 GABRB3P28472 473 aa6.81□□□□□ -1.32
UBR4-214ENST00000486515 CCR7P32248 378 aa6.81□□□□□ -1.32
UBR4-214ENST00000486515 RPIAP49247 311 aa6.81□□□□□ -1.32
UBR4-214ENST00000486515 CCT8P50990 548 aa6.81□□□□□ -1.32
UBR4-214ENST00000486515 NOVA1P51513 510 aaKnown RBP6.81□□□□□ -1.32
UBR4-214ENST00000486515 CLCNKAP51800 687 aa6.81□□□□□ -1.32
UBR4-214ENST00000486515 CTSCP53634 463 aa6.81□□□□□ -1.32
UBR4-214ENST00000486515 CDKN2DP55273 166 aa6.81□□□□□ -1.32
UBR4-214ENST00000486515 B4GALNT1Q00973 533 aa6.81□□□□□ -1.32
UBR4-214ENST00000486515 CTBSQ01459 385 aa6.81□□□□□ -1.32
UBR4-214ENST00000486515 ABRQ12979 859 aa6.81□□□□□ -1.32
UBR4-214ENST00000486515 SP140Q13342 867 aa6.81□□□□□ -1.32
UBR4-214ENST00000486515 FZD2Q14332 565 aa6.81□□□□□ -1.32
UBR4-214ENST00000486515 NFE2L1Q14494 772 aa6.81□□□□□ -1.32
UBR4-214ENST00000486515 ALG11Q2TAA5 492 aa6.81□□□□□ -1.32
UBR4-214ENST00000486515 ZNF542PQ5EBM4 170 aa6.81□□□□□ -1.32
UBR4-214ENST00000486515 UBAP2Q5T6F2 1119 aaKnown RBP6.81□□□□□ -1.32
UBR4-214ENST00000486515 HHATQ5VTY9 493 aa6.81□□□□□ -1.32
UBR4-214ENST00000486515 ZNF549Q6P9A3 640 aa6.81□□□□□ -1.32
UBR4-214ENST00000486515 SLC30A9Q6PML9 568 aa6.81□□□□□ -1.32
UBR4-214ENST00000486515 PAQR3Q6TCH7 311 aa6.81□□□□□ -1.32
UBR4-214ENST00000486515 NEK10Q6ZWH5 1172 aa6.81□□□□□ -1.32
UBR4-214ENST00000486515 UBE2R2Q712K3 238 aaPredicted RBP6.81□□□□□ -1.32
UBR4-214ENST00000486515 CMC1Q7Z7K0 106 aa6.81□□□□□ -1.32
UBR4-214ENST00000486515 ADAMTSL2Q86TH1 951 aa6.81□□□□□ -1.32
UBR4-214ENST00000486515 SLC9B2Q86UD5 537 aa6.81□□□□□ -1.32
UBR4-214ENST00000486515 TRABD2AQ86V40 505 aa6.81□□□□□ -1.32
UBR4-214ENST00000486515 PIM3Q86V86 326 aa6.81□□□□□ -1.32
UBR4-214ENST00000486515 C4orf33Q8N1A6 199 aa6.81□□□□□ -1.32
UBR4-214ENST00000486515 PELI3Q8N2H9 469 aa6.81□□□□□ -1.32
UBR4-214ENST00000486515 PNPLA1Q8N8W4 532 aa6.81□□□□□ -1.32
UBR4-214ENST00000486515 ANKRD42Q8N9B4 389 aa6.81□□□□□ -1.32
UBR4-214ENST00000486515 FAM46DQ8NEK8 389 aa6.81□□□□□ -1.32
UBR4-214ENST00000486515 CD200R1Q8TD46 325 aa6.81□□□□□ -1.32
UBR4-214ENST00000486515 ATL1Q8WXF7 558 aa6.81□□□□□ -1.32
UBR4-214ENST00000486515 OR1E3Q8WZA6 343 aa6.81□□□□□ -1.32
UBR4-214ENST00000486515 SH3KBP1Q96B97 665 aa6.81□□□□□ -1.32
UBR4-214ENST00000486515 CCDC126Q96EE4 140 aa6.81□□□□□ -1.32
UBR4-214ENST00000486515 PDXPQ96GD0 296 aa6.81□□□□□ -1.32
UBR4-214ENST00000486515 APOPT1Q96IL0 206 aa6.81□□□□□ -1.32
UBR4-214ENST00000486515 C12orf66Q96MD2 445 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms