RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 EBLN1P0CF75 366 aa12.54□□□□□ -0.4
CHMP3-208ENST00000486404 LIFP15018 202 aa12.54□□□□□ -0.4
CHMP3-208ENST00000486404 POLR2CP19387 275 aaPredicted RBP12.54□□□□□ -0.4
CHMP3-208ENST00000486404 CDH3P22223 829 aa12.54□□□□□ -0.4
CHMP3-208ENST00000486404 MGAT1P26572 445 aa12.54□□□□□ -0.4
CHMP3-208ENST00000486404 PDHA2P29803 388 aa12.54□□□□□ -0.4
CHMP3-208ENST00000486404 CSE1LP55060 971 aaKnown RBP12.54□□□□□ -0.4
CHMP3-208ENST00000486404 HSD11B2P80365 405 aa12.54□□□□□ -0.4
CHMP3-208ENST00000486404 PLOD1Q02809 727 aaPredicted RBP12.54□□□□□ -0.4
CHMP3-208ENST00000486404 ACY1Q03154 408 aa12.54□□□□□ -0.4
CHMP3-208ENST00000486404 TMTC4Q5T4D3 741 aa12.54□□□□□ -0.4
CHMP3-208ENST00000486404 LRRC8BQ6P9F7 803 aa12.54□□□□□ -0.4
CHMP3-208ENST00000486404 CCDC137Q6PK04 289 aaKnown RBP12.54□□□□□ -0.4
CHMP3-208ENST00000486404 XKR5Q6UX68 686 aa12.54□□□□□ -0.4
CHMP3-208ENST00000486404 HOOK3Q86VS8 718 aa12.54□□□□□ -0.4
CHMP3-208ENST00000486404 MPP5Q8N3R9 675 aa12.54□□□□□ -0.4
CHMP3-208ENST00000486404 OR52E1Q8NGJ3 308 aa12.54□□□□□ -0.4
CHMP3-208ENST00000486404 GSDMBQ8TAX9 411 aa12.54□□□□□ -0.4
CHMP3-208ENST00000486404 GRK7Q8WTQ7 553 aa12.54□□□□□ -0.4
CHMP3-208ENST00000486404 KLHL6Q8WZ60 621 aa12.54□□□□□ -0.4
CHMP3-208ENST00000486404 TFGQ92734 400 aaPredicted RBP12.54□□□□□ -0.4
CHMP3-208ENST00000486404 RNF31Q96EP0 1072 aa12.54□□□□□ -0.4
CHMP3-208ENST00000486404 OSBPL9Q96SU4 736 aa12.54□□□□□ -0.4
CHMP3-208ENST00000486404 MAP3K3Q99759 626 aa12.54□□□□□ -0.4
CHMP3-208ENST00000486404 EFHD1Q9BUP0 239 aa12.54□□□□□ -0.4
CHMP3-208ENST00000486404 KCNF1Q9H3M0 494 aa12.54□□□□□ -0.4
CHMP3-208ENST00000486404 SYBUQ9NX95 663 aa12.54□□□□□ -0.4
CHMP3-208ENST00000486404 PILRAQ9UKJ1 303 aa12.54□□□□□ -0.4
CHMP3-208ENST00000486404 RARRES3Q9UL19 164 aa12.54□□□□□ -0.4
CHMP3-208ENST00000486404 ASF1AQ9Y294 204 aa12.54□□□□□ -0.4
CHMP3-208ENST00000486404 TMEM184BQ9Y519 407 aaPredicted RBP12.54□□□□□ -0.4
CHMP3-208ENST00000486404 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.53□□□□□ -0.4
CHMP3-208ENST00000486404 ZNF891A8MT65 544 aaPredicted RBP12.53□□□□□ -0.4
CHMP3-208ENST00000486404 CD3EAPO15446 510 aaKnown RBP12.53□□□□□ -0.4
CHMP3-208ENST00000486404 PHF2O75151 1096 aa12.53□□□□□ -0.4
CHMP3-208ENST00000486404 NDUFS3O75489 264 aa12.53□□□□□ -0.4
CHMP3-208ENST00000486404 KIAA0754O94854 1291 aa12.53□□□□□ -0.4
CHMP3-208ENST00000486404 DLGAP3O95886 979 aa12.53□□□□□ -0.4
CHMP3-208ENST00000486404 APOA4P06727 396 aa12.53□□□□□ -0.4
CHMP3-208ENST00000486404 PAMP19021 973 aa12.53□□□□□ -0.4
CHMP3-208ENST00000486404 KPNA2P52292 529 aaKnown RBP12.53□□□□□ -0.4
CHMP3-208ENST00000486404 PRKG2Q13237 762 aa12.53□□□□□ -0.4
CHMP3-208ENST00000486404 MAP7Q14244 749 aa12.53□□□□□ -0.4
CHMP3-208ENST00000486404 SEMA3AQ14563 771 aa12.53□□□□□ -0.4
CHMP3-208ENST00000486404 KCNJ11Q14654 390 aa12.53□□□□□ -0.4
CHMP3-208ENST00000486404 KCNAB1Q14722 419 aa12.53□□□□□ -0.4
CHMP3-208ENST00000486404 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.53□□□□□ -0.4
CHMP3-208ENST00000486404 ZNF658BQ4V348 819 aaPredicted RBP12.53□□□□□ -0.4
CHMP3-208ENST00000486404 PTRHD1Q6GMV3 140 aaKnown RBP12.53□□□□□ -0.4
CHMP3-208ENST00000486404 TTC27Q6P3X3 843 aa12.53□□□□□ -0.4
CHMP3-208ENST00000486404 C6orf15Q6UXA7 325 aaPredicted RBP12.53□□□□□ -0.4
CHMP3-208ENST00000486404 ZNF534Q76KX8 674 aa12.53□□□□□ -0.4
CHMP3-208ENST00000486404 LDB1Q86U70 411 aaPredicted RBP12.53□□□□□ -0.4
CHMP3-208ENST00000486404 AMIGO1Q86WK6 493 aa12.53□□□□□ -0.4
CHMP3-208ENST00000486404 REXO1L1PQ8IX06 675 aa12.53□□□□□ -0.4
CHMP3-208ENST00000486404 CARFQ8N187 725 aa12.53□□□□□ -0.4
CHMP3-208ENST00000486404 TTC9Q92623 222 aa12.53□□□□□ -0.4
CHMP3-208ENST00000486404 WBP1Q96G27 269 aa12.53□□□□□ -0.4
CHMP3-208ENST00000486404 SLC41A2Q96JW4 573 aa12.53□□□□□ -0.4
CHMP3-208ENST00000486404 MRM3Q9HC36 420 aaKnown RBP12.53□□□□□ -0.4
CHMP3-208ENST00000486404 XAB2Q9HCS7 855 aaKnown RBP12.53□□□□□ -0.4
CHMP3-208ENST00000486404 GNPTGQ9UJJ9 305 aa12.53□□□□□ -0.4
CHMP3-208ENST00000486404 POMT2Q9UKY4 750 aa12.53□□□□□ -0.4
CHMP3-208ENST00000486404 TDRKHQ9Y2W6 561 aaKnown RBP12.53□□□□□ -0.4
CHMP3-208ENST00000486404 SNRNP200O75643 2136 aaKnown RBP12.52□□□□□ -0.4
CHMP3-208ENST00000486404 C2orf74A8MZ97 194 aa12.52□□□□□ -0.41
CHMP3-208ENST00000486404 BTN3A1O00481 513 aa12.52□□□□□ -0.41
CHMP3-208ENST00000486404 PRMT5O14744 637 aaPredicted RBP12.52□□□□□ -0.41
CHMP3-208ENST00000486404 MT-ND3P03897 115 aa12.52□□□□□ -0.41
CHMP3-208ENST00000486404 PRB1P04280 392 aa12.52□□□□□ -0.41
CHMP3-208ENST00000486404 RPN2P04844 631 aa12.52□□□□□ -0.41
CHMP3-208ENST00000486404 ITGB2P05107 769 aa12.52□□□□□ -0.41
CHMP3-208ENST00000486404 FGF5P12034 268 aa12.52□□□□□ -0.41
CHMP3-208ENST00000486404 NMBRP28336 390 aa12.52□□□□□ -0.41
CHMP3-208ENST00000486404 SHMT2P34897 504 aa12.52□□□□□ -0.41
CHMP3-208ENST00000486404 COILP38432 576 aaPredicted RBP12.52□□□□□ -0.41
CHMP3-208ENST00000486404 STAT5AP42229 794 aa12.52□□□□□ -0.41
CHMP3-208ENST00000486404 FNTAP49354 379 aa12.52□□□□□ -0.41
CHMP3-208ENST00000486404 EIF3BP55884 814 aaKnown RBP12.52□□□□□ -0.41
CHMP3-208ENST00000486404 ABHD18Q0P651 414 aa12.52□□□□□ -0.41
CHMP3-208ENST00000486404 HSPA14Q0VDF9 509 aa12.52□□□□□ -0.41
CHMP3-208ENST00000486404 PPP1R7Q15435 360 aa12.52□□□□□ -0.41
CHMP3-208ENST00000486404 KCTD19Q17RG1 926 aaPredicted RBP12.52□□□□□ -0.41
CHMP3-208ENST00000486404 RNF187Q5TA31 235 aaPredicted RBP12.52□□□□□ -0.41
CHMP3-208ENST00000486404 MRNIPQ6NTE8 343 aa12.52□□□□□ -0.41
CHMP3-208ENST00000486404 NAPRTQ6XQN6 538 aa12.52□□□□□ -0.41
CHMP3-208ENST00000486404 TMEM126BQ8IUX1 230 aa12.52□□□□□ -0.41
CHMP3-208ENST00000486404 UNC5BQ8IZJ1 945 aa12.52□□□□□ -0.41
CHMP3-208ENST00000486404 GALNT6Q8NCL4 622 aa12.52□□□□□ -0.41
CHMP3-208ENST00000486404 PHC3Q8NDX5 983 aa12.52□□□□□ -0.41
CHMP3-208ENST00000486404 OR5AR1Q8NGP9 310 aa12.52□□□□□ -0.41
CHMP3-208ENST00000486404 ACTRT1Q8TDG2 376 aa12.52□□□□□ -0.41
CHMP3-208ENST00000486404 COG1Q8WTW3 980 aa12.52□□□□□ -0.41
CHMP3-208ENST00000486404 SKA2Q8WVK7 121 aaPredicted RBP12.52□□□□□ -0.41
CHMP3-208ENST00000486404 ASZ1Q8WWH4 475 aa12.52□□□□□ -0.41
CHMP3-208ENST00000486404 SGSM3Q96HU1 749 aa12.52□□□□□ -0.41
CHMP3-208ENST00000486404 PANX3Q96QZ0 392 aa12.52□□□□□ -0.41
CHMP3-208ENST00000486404 TFB2MQ9H5Q4 396 aaKnown RBP12.52□□□□□ -0.41
CHMP3-208ENST00000486404 XKR8Q9H6D3 395 aa12.52□□□□□ -0.41
CHMP3-208ENST00000486404 FGF21Q9NSA1 209 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms