RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 UVRAGQ9P2Y5 699 aa3.99□□□□□ -1.77
PRPF38B-205ENST00000485810 SPASTQ9UBP0 616 aa3.99□□□□□ -1.77
PRPF38B-205ENST00000485810 CNOT8Q9UFF9 292 aaKnown RBP3.99□□□□□ -1.77
PRPF38B-205ENST00000485810 LEF1Q9UJU2 399 aaPredicted RBP3.99□□□□□ -1.77
PRPF38B-205ENST00000485810 DNAJC12Q9UKB3 198 aa3.99□□□□□ -1.77
PRPF38B-205ENST00000485810 AJAP1Q9UKB5 411 aaPredicted RBP3.99□□□□□ -1.77
PRPF38B-205ENST00000485810 PACSIN2Q9UNF0 486 aaPredicted RBP3.99□□□□□ -1.77
PRPF38B-205ENST00000485810 PPIEQ9UNP9 301 aaKnown RBP3.99□□□□□ -1.77
PRPF38B-205ENST00000485810 GAB2Q9UQC2 676 aa3.99□□□□□ -1.77
PRPF38B-205ENST00000485810 R3HDM2Q9Y2K5 976 aaKnown RBP3.99□□□□□ -1.77
PRPF38B-205ENST00000485810 COQ4Q9Y3A0 265 aa3.99□□□□□ -1.77
PRPF38B-205ENST00000485810 ASB1Q9Y576 335 aa3.99□□□□□ -1.77
PRPF38B-205ENST00000485810 PCDHGA5Q9Y5G8 931 aa3.99□□□□□ -1.77
PRPF38B-205ENST00000485810 COPG1Q9Y678 874 aaKnown RBP3.99□□□□□ -1.77
PRPF38B-205ENST00000485810 MYH4Q9Y623 1939 aa3.99□□□□□ -1.77
PRPF38B-205ENST00000485810 LOXHD1Q8IVV2 1947 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 A0A075B6Q4 140 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 A0A1B0GWJ7 208 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 A0A1W2PPW3 197 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 OR6C76A6NM76 312 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 PRR23D1E9PI22 279 aaPredicted RBP3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 PDLIM1O00151 329 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 WRBO00258 174 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 PPIP5K2O43314 1243 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 MED7O43513 233 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 ASNA1O43681 348 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 GPRIN2O60269 458 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 MGRN1O60291 552 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 ATP6V1G1O75348 118 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 CLN5O75503 358 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 RHBDL1O75783 438 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 RAD17O75943 681 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 NEBLO76041 1014 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 RHOBTB1O94844 696 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 AK1P00568 194 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 MT-ATP6P00846 226 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 RPLP2P05387 115 aaKnown RBP3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 FYNP06241 537 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 ANXA2P07355 339 aaKnown RBP3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 FHP07954 510 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 CNPP09543 421 aaKnown RBP3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 ALOX5P09917 674 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 PRR23D2P0DMB1 279 aaPredicted RBP3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 KITP10721 976 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 SRCP12931 536 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 IDO1P14902 403 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 GJA1P17302 382 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 ERCC2P18074 760 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 PTPN3P26045 913 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 APEX1P27695 318 aaKnown RBP3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 PCSK1P29120 753 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 CCND2P30279 289 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 HOXA6P31267 233 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 RRM2P31350 389 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 GTF2H1P32780 548 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 MSX2P35548 267 aaPredicted RBP3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 BMPR1AP36894 532 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 CAPGP40121 348 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 HSPA13P48723 471 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 NPY4RP50391 375 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 CCR3P51677 355 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 CLCNKAP51800 687 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 MAP2K6P52564 334 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 SUMO3P55854 103 aaPredicted RBP3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 TAS2R40P59535 323 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 KIAA1024LP59773 190 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 NANOS3P60323 173 aaKnown RBP3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 ACTR3P61158 418 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 GPC5P78333 572 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 GTF2BQ00403 316 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 SPIBQ01892 262 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 GAD2Q05329 585 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 PTP4A2Q12974 167 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 ABRQ12979 859 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 GRIK3Q13003 919 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 AIMP2Q13155 320 aaKnown RBP3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 SCGB2A2Q13296 93 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 ZNF177Q13360 481 aaPredicted RBP3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 GAMTQ14353 236 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 TBCCQ15814 346 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 RGS21Q2M5E4 152 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 CBWD6Q4V339 395 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 IGSF11Q5DX21 431 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 ZRANB3Q5FWF4 1079 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 CBWD3Q5JTY5 395 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 CBWD5Q5RIA9 395 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 WLSQ5T9L3 541 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 CACHD1Q5VU97 1274 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 FKBP1CQ5VVH2 108 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 TMEM53Q6P2H8 277 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 PSRC1Q6PGN9 363 aaPredicted RBP3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 RHBDF2Q6PJF5 856 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 DEGS2Q6QHC5 323 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 SUSD1Q6UWL2 747 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 CRELD2Q6UXH1 353 aaPredicted RBP3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 ZNF813Q6ZN06 617 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 CCDC121Q6ZUS5 278 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 ADCK2Q7Z695 626 aa3.98□□□□□ -1.77
PRPF38B-205ENST00000485810 FAM83AQ86UY5 434 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms