RNA–Protein interactions for RNA: ENST00000485567.1

FN1-222, Transcript of fibronectin 1, human

TSL 1 (best)

Gene FN1, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-222	ENST00000485567	TMED6	Q8WW62	240 aa		3.91	□□□□□ -1.78
FN1-222	ENST00000485567	KCNE4	Q8WWG9	221 aa		3.91	□□□□□ -1.78
FN1-222	ENST00000485567	MR1	Q95460	341 aa		3.91	□□□□□ -1.78
FN1-222	ENST00000485567	ZNF48	Q96MX3	618 aa	Predicted RBP	3.91	□□□□□ -1.78
FN1-222	ENST00000485567	SFXN2	Q96NB2	322 aa		3.91	□□□□□ -1.78
FN1-222	ENST00000485567	CAMK1G	Q96NX5	476 aa		3.91	□□□□□ -1.78
FN1-222	ENST00000485567	MUS81	Q96NY9	551 aa		3.91	□□□□□ -1.78
FN1-222	ENST00000485567	FCRL4	Q96PJ5	515 aa		3.91	□□□□□ -1.78
FN1-222	ENST00000485567	FNBP1	Q96RU3	617 aa		3.91	□□□□□ -1.78
FN1-222	ENST00000485567	DESI2	Q9BSY9	194 aa		3.91	□□□□□ -1.78
FN1-222	ENST00000485567	FNDC11	Q9BVV2	318 aa		3.91	□□□□□ -1.78
FN1-222	ENST00000485567	MRPL44	Q9H9J2	332 aa	Known RBP	3.91	□□□□□ -1.78
FN1-222	ENST00000485567	COPS7B	Q9H9Q2	264 aa	Predicted RBP	3.91	□□□□□ -1.78
FN1-222	ENST00000485567	CHCHD3	Q9NX63	227 aa	Known RBP	3.91	□□□□□ -1.78
FN1-222	ENST00000485567	SNX7	Q9UNH6	387 aa		3.91	□□□□□ -1.78
FN1-222	ENST00000485567	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	3.91	□□□□□ -1.78
FN1-222	ENST00000485567	POMT1	Q9Y6A1	747 aa		3.91	□□□□□ -1.78
FN1-222	ENST00000485567	MED19	A0JLT2	244 aa	Predicted RBP	3.9	□□□□□ -1.79
FN1-222	ENST00000485567	DNM1L	O00429	736 aa		3.9	□□□□□ -1.79
FN1-222	ENST00000485567	IFIT3	O14879	490 aa	Known RBP	3.9	□□□□□ -1.79
FN1-222	ENST00000485567	EIF3D	O15371	548 aa	Known RBP eCLIP	3.9	□□□□□ -1.79
FN1-222	ENST00000485567	WDR1	O75083	606 aa		3.9	□□□□□ -1.79
FN1-222	ENST00000485567	GCNT3	O95395	438 aa		3.9	□□□□□ -1.79
FN1-222	ENST00000485567	GBA	P04062	536 aa		3.9	□□□□□ -1.79
FN1-222	ENST00000485567	ZFY	P08048	801 aa	Predicted RBP	3.9	□□□□□ -1.79
FN1-222	ENST00000485567	FCGR1A	P12314	374 aa		3.9	□□□□□ -1.79
FN1-222	ENST00000485567	DAO	P14920	347 aa		3.9	□□□□□ -1.79
FN1-222	ENST00000485567	CSF2RA	P15509	400 aa		3.9	□□□□□ -1.79
FN1-222	ENST00000485567	PDGFRA	P16234	1089 aa		3.9	□□□□□ -1.79
FN1-222	ENST00000485567	ADRA2C	P18825	462 aa		3.9	□□□□□ -1.79
FN1-222	ENST00000485567	MLLT10	P55197	1068 aa		3.9	□□□□□ -1.79
FN1-222	ENST00000485567	POLR2L	P62875	67 aa	Known RBP	3.9	□□□□□ -1.79
FN1-222	ENST00000485567	PKN2	Q16513	984 aa	Known RBP	3.9	□□□□□ -1.79
FN1-222	ENST00000485567	KLC3	Q6P597	504 aa		3.9	□□□□□ -1.79
FN1-222	ENST00000485567	MOXD1	Q6UVY6	613 aa		3.9	□□□□□ -1.79
FN1-222	ENST00000485567	C9orf47	Q6ZRZ4	202 aa		3.9	□□□□□ -1.79
FN1-222	ENST00000485567	TMPRSS11F	Q6ZWK6	438 aa		3.9	□□□□□ -1.79
FN1-222	ENST00000485567	DGLUCY	Q7Z3D6	616 aa		3.9	□□□□□ -1.79
FN1-222	ENST00000485567	SATL1	Q86VE3	508 aa		3.9	□□□□□ -1.79
FN1-222	ENST00000485567	IQCA1	Q86XH1	822 aa		3.9	□□□□□ -1.79
FN1-222	ENST00000485567	KMT5C	Q86Y97	462 aa		3.9	□□□□□ -1.79
FN1-222	ENST00000485567	TIGD4	Q8IY51	512 aa		3.9	□□□□□ -1.79
FN1-222	ENST00000485567	CEP57L1	Q8IYX8	460 aa		3.9	□□□□□ -1.79
FN1-222	ENST00000485567	FBXL14	Q8N1E6	418 aa		3.9	□□□□□ -1.79
FN1-222	ENST00000485567	SIX6OS1	Q8N1H7	587 aa		3.9	□□□□□ -1.79
FN1-222	ENST00000485567	ZNF611	Q8N823	705 aa		3.9	□□□□□ -1.79
FN1-222	ENST00000485567	SLC4A11	Q8NBS3	891 aa		3.9	□□□□□ -1.79
FN1-222	ENST00000485567	FIG4	Q92562	907 aa		3.9	□□□□□ -1.79
FN1-222	ENST00000485567	CORO2A	Q92828	525 aa		3.9	□□□□□ -1.79
FN1-222	ENST00000485567	SEMA4D	Q92854	862 aa		3.9	□□□□□ -1.79
FN1-222	ENST00000485567	MIB2	Q96AX9	1013 aa		3.9	□□□□□ -1.79
FN1-222	ENST00000485567	MLPH	Q9BV36	600 aa	Predicted RBP	3.9	□□□□□ -1.79
FN1-222	ENST00000485567	FZD8	Q9H461	694 aa		3.9	□□□□□ -1.79
FN1-222	ENST00000485567	GAREM1	Q9H706	876 aa		3.9	□□□□□ -1.79
FN1-222	ENST00000485567	TBC1D17	Q9HA65	648 aa		3.9	□□□□□ -1.79
FN1-222	ENST00000485567	OCIAD1	Q9NX40	245 aa		3.9	□□□□□ -1.79
FN1-222	ENST00000485567	DNAJB9	Q9UBS3	223 aa		3.9	□□□□□ -1.79
FN1-222	ENST00000485567	ABT1	Q9ULW3	272 aa	Known RBP	3.9	□□□□□ -1.79
FN1-222	ENST00000485567	VDAC3	Q9Y277	283 aa		3.9	□□□□□ -1.79
FN1-222	ENST00000485567	DLGAP4	Q9Y2H0	992 aa		3.9	□□□□□ -1.79
FN1-222	ENST00000485567	OR2W1	Q9Y3N9	320 aa		3.9	□□□□□ -1.79
FN1-222	ENST00000485567	CGNL1	Q0VF96	1302 aa		3.9	□□□□□ -1.79
FN1-222	ENST00000485567		A0A0G2JPF8	293 aa		3.89	□□□□□ -1.79
FN1-222	ENST00000485567	MAGEA13P	A6NCF6	341 aa		3.89	□□□□□ -1.79
FN1-222	ENST00000485567	NEMP2	A6NFY4	417 aa		3.89	□□□□□ -1.79
FN1-222	ENST00000485567	TRIM64	A6NGJ6	449 aa		3.89	□□□□□ -1.79
FN1-222	ENST00000485567	TRIM64B	A6NI03	449 aa		3.89	□□□□□ -1.79
FN1-222	ENST00000485567	SRRM3	A6NNA2	597 aa	Predicted RBP	3.89	□□□□□ -1.79
FN1-222	ENST00000485567	ENO4	A6NNW6	628 aa		3.89	□□□□□ -1.79
FN1-222	ENST00000485567	HNRNPCL3	B7ZW38	293 aa		3.89	□□□□□ -1.79
FN1-222	ENST00000485567	TMEM178B	H3BS89	294 aa		3.89	□□□□□ -1.79
FN1-222	ENST00000485567	MEIS2	O14770	477 aa		3.89	□□□□□ -1.79
FN1-222	ENST00000485567	IGHV2-70	P01814	119 aa		3.89	□□□□□ -1.79
FN1-222	ENST00000485567	TFAP2A	P05549	437 aa		3.89	□□□□□ -1.79
FN1-222	ENST00000485567	HNRNPCL4	P0DMR1	293 aa		3.89	□□□□□ -1.79
FN1-222	ENST00000485567	CDK4	P11802	303 aa		3.89	□□□□□ -1.79
FN1-222	ENST00000485567	PTPN3	P26045	913 aa		3.89	□□□□□ -1.79
FN1-222	ENST00000485567	HOXA11	P31270	313 aa	Predicted RBP	3.89	□□□□□ -1.79
FN1-222	ENST00000485567	SLC6A6	P31641	620 aa		3.89	□□□□□ -1.79
FN1-222	ENST00000485567	CCKBR	P32239	447 aa		3.89	□□□□□ -1.79
FN1-222	ENST00000485567	DEK	P35659	375 aa	Known RBP	3.89	□□□□□ -1.79
FN1-222	ENST00000485567	AMPH	P49418	695 aa		3.89	□□□□□ -1.79
FN1-222	ENST00000485567	ISL1	P61371	349 aa		3.89	□□□□□ -1.79
FN1-222	ENST00000485567	TUBB4B	P68371	445 aa		3.89	□□□□□ -1.79
FN1-222	ENST00000485567	MZT1	Q08AG7	82 aa		3.89	□□□□□ -1.79
FN1-222	ENST00000485567	E2F5	Q15329	346 aa		3.89	□□□□□ -1.79
FN1-222	ENST00000485567	UGCG	Q16739	394 aa		3.89	□□□□□ -1.79
FN1-222	ENST00000485567	ZRANB3	Q5FWF4	1079 aa		3.89	□□□□□ -1.79
FN1-222	ENST00000485567	MDH1B	Q5I0G3	518 aa		3.89	□□□□□ -1.79
FN1-222	ENST00000485567	FAM91A1	Q658Y4	838 aa		3.89	□□□□□ -1.79
FN1-222	ENST00000485567	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	3.89	□□□□□ -1.79
FN1-222	ENST00000485567	PTOV1	Q86YD1	416 aa		3.89	□□□□□ -1.79
FN1-222	ENST00000485567	ODF3L1	Q8IXM7	274 aa		3.89	□□□□□ -1.79
FN1-222	ENST00000485567	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	3.89	□□□□□ -1.79
FN1-222	ENST00000485567	DCP1B	Q8IZD4	617 aa	Known RBP	3.89	□□□□□ -1.79
FN1-222	ENST00000485567	MUC20	Q8N307	709 aa	Predicted RBP	3.89	□□□□□ -1.79
FN1-222	ENST00000485567	TMCO5A	Q8N6Q1	288 aa		3.89	□□□□□ -1.79
FN1-222	ENST00000485567	L3MBTL4	Q8NA19	623 aa		3.89	□□□□□ -1.79
FN1-222	ENST00000485567	KCNH5	Q8NCM2	988 aa		3.89	□□□□□ -1.79
FN1-222	ENST00000485567	SMRP1	Q8NCR6	262 aa		3.89	□□□□□ -1.79

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