RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 ARHGAP24Q8N264 748 aa25.7■■□□□ 1.7
SHOX2-204ENST00000483851 BEND7Q8N7W2 519 aaPredicted RBP25.7■■□□□ 1.7
SHOX2-204ENST00000483851 MCOLN3Q8TDD5 553 aa25.7■■□□□ 1.7
SHOX2-204ENST00000483851 MKRN2Q9H000 416 aaKnown RBP25.7■■□□□ 1.7
SHOX2-204ENST00000483851 FBXL12Q9NXK8 326 aa25.7■■□□□ 1.7
SHOX2-204ENST00000483851 F5P12259 2224 aa25.69■■□□□ 1.7
SHOX2-204ENST00000483851 IGLON5A6NGN9 336 aa25.69■■□□□ 1.7
SHOX2-204ENST00000483851 DCXO43602 365 aa25.69■■□□□ 1.7
SHOX2-204ENST00000483851 GUCA1CO95843 209 aa25.69■■□□□ 1.7
SHOX2-204ENST00000483851 OTCP00480 354 aa25.69■■□□□ 1.7
SHOX2-204ENST00000483851 GTF2H2Q13888 395 aa25.69■■□□□ 1.7
SHOX2-204ENST00000483851 RBBP7Q16576 425 aa25.69■■□□□ 1.7
SHOX2-204ENST00000483851 DNAL1Q4LDG9 190 aa25.69■■□□□ 1.7
SHOX2-204ENST00000483851 ZNF658BQ4V348 819 aaPredicted RBP25.69■■□□□ 1.7
SHOX2-204ENST00000483851 GTF2H2CQ6P1K8 395 aa25.69■■□□□ 1.7
SHOX2-204ENST00000483851 VRK3Q8IV63 474 aa25.69■■□□□ 1.7
SHOX2-204ENST00000483851 TWIST2Q8WVJ9 160 aa25.69■■□□□ 1.7
SHOX2-204ENST00000483851 WDR60Q8WVS4 1066 aa25.69■■□□□ 1.7
SHOX2-204ENST00000483851 PPP1R36Q96LQ0 422 aa25.69■■□□□ 1.7
SHOX2-204ENST00000483851 PLRG1O43660 514 aaKnown RBP25.68■■□□□ 1.7
SHOX2-204ENST00000483851 LILRB5O75023 590 aa25.68■■□□□ 1.7
SHOX2-204ENST00000483851 CRCPO75575 148 aa25.68■■□□□ 1.7
SHOX2-204ENST00000483851 RPS21P63220 83 aaKnown RBP25.68■■□□□ 1.7
SHOX2-204ENST00000483851 KLF10Q13118 480 aa25.68■■□□□ 1.7
SHOX2-204ENST00000483851 KPNB1Q14974 876 aaKnown RBP25.68■■□□□ 1.7
SHOX2-204ENST00000483851 MAP7D1Q3KQU3 841 aa25.68■■□□□ 1.7
SHOX2-204ENST00000483851 GOLGA7Q7Z5G4 137 aa25.68■■□□□ 1.7
SHOX2-204ENST00000483851 SYVN1Q86TM6 617 aa25.68■■□□□ 1.7
SHOX2-204ENST00000483851 SLC22A15Q8IZD6 547 aa25.68■■□□□ 1.7
SHOX2-204ENST00000483851 SKA2Q8WVK7 121 aaPredicted RBP25.68■■□□□ 1.7
SHOX2-204ENST00000483851 ARL15Q9NXU5 204 aa25.68■■□□□ 1.7
SHOX2-204ENST00000483851 OPTCQ9UBM4 332 aa25.68■■□□□ 1.7
SHOX2-204ENST00000483851 SERGEFQ9UGK8 458 aa25.68■■□□□ 1.7
SHOX2-204ENST00000483851 FZD4Q9ULV1 537 aa25.68■■□□□ 1.7
SHOX2-204ENST00000483851 ASB1Q9Y576 335 aa25.68■■□□□ 1.7
SHOX2-204ENST00000483851 K7EPI3 171 aa25.68■■□□□ 1.7
SHOX2-204ENST00000483851 FBXO48Q5FWF7 155 aa25.68■■□□□ 1.7
SHOX2-204ENST00000483851 NEK5Q6P3R8 708 aa25.68■■□□□ 1.7
SHOX2-204ENST00000483851 USP30Q70CQ3 517 aa25.68■■□□□ 1.7
SHOX2-204ENST00000483851 LARP4Q71RC2 724 aaKnown RBP eCLIP25.68■■□□□ 1.7
SHOX2-204ENST00000483851 KBTBD6Q86V97 674 aa25.68■■□□□ 1.7
SHOX2-204ENST00000483851 TMEM79Q9BSE2 394 aa25.68■■□□□ 1.7
SHOX2-204ENST00000483851 OR2AG1Q9H205 316 aa25.68■■□□□ 1.7
SHOX2-204ENST00000483851 ATXN10Q9UBB4 475 aa25.68■■□□□ 1.7
SHOX2-204ENST00000483851 COLQQ9Y215 455 aaPredicted RBP25.68■■□□□ 1.7
SHOX2-204ENST00000483851 TRPM6Q9BX84 2022 aa25.67■■□□□ 1.7
SHOX2-204ENST00000483851 GPR89AB7ZAQ6 455 aa25.67■■□□□ 1.7
SHOX2-204ENST00000483851 PSIP1O75475 530 aaKnown RBP25.67■■□□□ 1.7
SHOX2-204ENST00000483851 GPR89BP0CG08 455 aa25.67■■□□□ 1.7
SHOX2-204ENST00000483851 GCKP35557 465 aa25.67■■□□□ 1.7
SHOX2-204ENST00000483851 HSPA7P48741 367 aa25.67■■□□□ 1.7
SHOX2-204ENST00000483851 NAA25Q14CX7 972 aa25.67■■□□□ 1.7
SHOX2-204ENST00000483851 EOGTQ5NDL2 527 aa25.67■■□□□ 1.7
SHOX2-204ENST00000483851 ESAMQ96AP7 390 aa25.67■■□□□ 1.7
SHOX2-204ENST00000483851 ERLEC1Q96DZ1 483 aa25.67■■□□□ 1.7
SHOX2-204ENST00000483851 ANKRD27Q96NW4 1050 aa25.67■■□□□ 1.7
SHOX2-204ENST00000483851 C1QTNF2Q9BXJ5 285 aa25.67■■□□□ 1.7
SHOX2-204ENST00000483851 NOL11Q9H8H0 719 aaKnown RBP25.67■■□□□ 1.7
SHOX2-204ENST00000483851 SLC2A4RGQ9NR83 387 aa25.67■■□□□ 1.7
SHOX2-204ENST00000483851 STK16O75716 305 aa25.66■■□□□ 1.7
SHOX2-204ENST00000483851 WSCD2Q2TBF2 565 aa25.66■■□□□ 1.7
SHOX2-204ENST00000483851 C1QTNF7Q9BXJ2 289 aa25.66■■□□□ 1.7
SHOX2-204ENST00000483851 PREBQ9HCU5 417 aa25.66■■□□□ 1.7
SHOX2-204ENST00000483851 ZNF225Q9UK10 706 aa25.66■■□□□ 1.7
SHOX2-204ENST00000483851 SEC23IPQ9Y6Y8 1000 aaKnown RBP25.66■■□□□ 1.7
SHOX2-204ENST00000483851 KLHL33A6NCF5 533 aa25.66■■□□□ 1.7
SHOX2-204ENST00000483851 KATNA1O75449 491 aa25.66■■□□□ 1.7
SHOX2-204ENST00000483851 FOXA1P55317 472 aa25.66■■□□□ 1.7
SHOX2-204ENST00000483851 HERC3Q15034 1050 aa25.66■■□□□ 1.7
SHOX2-204ENST00000483851 SMAD2Q15796 467 aaKnown RBP25.66■■□□□ 1.7
SHOX2-204ENST00000483851 LRRC70Q7Z2Q7 622 aa25.66■■□□□ 1.7
SHOX2-204ENST00000483851 CACUL1Q86Y37 369 aa25.66■■□□□ 1.7
SHOX2-204ENST00000483851 GANCQ8TET4 914 aa25.66■■□□□ 1.7
SHOX2-204ENST00000483851 FOPNLQ96NB1 174 aa25.66■■□□□ 1.7
SHOX2-204ENST00000483851 NTMT1Q9BV86 223 aa25.66■■□□□ 1.7
SHOX2-204ENST00000483851 TEX101Q9BY14 249 aa25.66■■□□□ 1.7
SHOX2-204ENST00000483851 SLC32A1Q9H598 525 aa25.66■■□□□ 1.7
SHOX2-204ENST00000483851 IPPKQ9H8X2 491 aa25.66■■□□□ 1.7
SHOX2-204ENST00000483851 ANGPTL3Q9Y5C1 460 aa25.66■■□□□ 1.7
SHOX2-204ENST00000483851 ST14Q9Y5Y6 855 aa25.66■■□□□ 1.7
SHOX2-204ENST00000483851 DNMT3AQ9Y6K1 912 aaPredicted RBP25.66■■□□□ 1.7
SHOX2-204ENST00000483851 THRAP10827 490 aa25.65■■□□□ 1.7
SHOX2-204ENST00000483851 COL9A1P20849 921 aa25.65■■□□□ 1.7
SHOX2-204ENST00000483851 ATP4BP51164 291 aa25.65■■□□□ 1.7
SHOX2-204ENST00000483851 TRAPPC5Q8IUR0 188 aa25.65■■□□□ 1.7
SHOX2-204ENST00000483851 SCUBE1Q8IWY4 988 aa25.65■■□□□ 1.7
SHOX2-204ENST00000483851 ASB12Q8WXK4 309 aa25.65■■□□□ 1.7
SHOX2-204ENST00000483851 TMEM202A6NGA9 273 aa25.64■■□□□ 1.7
SHOX2-204ENST00000483851 OR7A17O14581 309 aa25.64■■□□□ 1.7
SHOX2-204ENST00000483851 PIP5K1BO14986 540 aa25.64■■□□□ 1.7
SHOX2-204ENST00000483851 UBDO15205 165 aa25.64■■□□□ 1.7
SHOX2-204ENST00000483851 CCNT2O60583 730 aaKnown RBP25.64■■□□□ 1.7
SHOX2-204ENST00000483851 CATP04040 527 aaKnown RBP25.64■■□□□ 1.7
SHOX2-204ENST00000483851 EPB42P16452 691 aa25.64■■□□□ 1.7
SHOX2-204ENST00000483851 MAP4P27816 1152 aaKnown RBP25.64■■□□□ 1.7
SHOX2-204ENST00000483851 TRIM23P36406 574 aa25.64■■□□□ 1.7
SHOX2-204ENST00000483851 CDK3Q00526 305 aa25.64■■□□□ 1.7
SHOX2-204ENST00000483851 TMEM259Q4ZIN3 620 aa25.64■■□□□ 1.7
SHOX2-204ENST00000483851 RNF165Q6ZSG1 346 aa25.64■■□□□ 1.7
SHOX2-204ENST00000483851 NET1Q7Z628 596 aaPredicted RBP25.64■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms