RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 NUAK1O60285 661 aa6.52□□□□□ -1.37
VCP-205ENST00000479300 DNAJC6O75061 913 aa6.52□□□□□ -1.37
VCP-205ENST00000479300 VPS4BO75351 444 aa6.52□□□□□ -1.37
VCP-205ENST00000479300 ANXA9O76027 345 aa6.52□□□□□ -1.37
VCP-205ENST00000479300 CDK14O94921 469 aa6.52□□□□□ -1.37
VCP-205ENST00000479300 NDUFA10O95299 355 aa6.52□□□□□ -1.37
VCP-205ENST00000479300 TIAF1O95411 115 aa6.52□□□□□ -1.37
VCP-205ENST00000479300 PRLP01236 227 aa6.52□□□□□ -1.37
VCP-205ENST00000479300 MMP2P08253 660 aa6.52□□□□□ -1.37
VCP-205ENST00000479300 PIRTP0C851 137 aa6.52□□□□□ -1.37
VCP-205ENST00000479300 AMD1P17707 334 aa6.52□□□□□ -1.37
VCP-205ENST00000479300 IDSP22304 550 aa6.52□□□□□ -1.37
VCP-205ENST00000479300 HALP42357 657 aa6.52□□□□□ -1.37
VCP-205ENST00000479300 CCNG1P51959 295 aa6.52□□□□□ -1.37
VCP-205ENST00000479300 EPHA4P54764 986 aa6.52□□□□□ -1.37
VCP-205ENST00000479300 GEMP55040 296 aa6.52□□□□□ -1.37
VCP-205ENST00000479300 HADHBP55084 474 aaKnown RBP6.52□□□□□ -1.37
VCP-205ENST00000479300 DCDC1P59894 354 aa6.52□□□□□ -1.37
VCP-205ENST00000479300 COPS2P61201 443 aa6.52□□□□□ -1.37
VCP-205ENST00000479300 MC1RQ01726 317 aa6.52□□□□□ -1.37
VCP-205ENST00000479300 CHAF1BQ13112 559 aa6.52□□□□□ -1.37
VCP-205ENST00000479300 SEPT6Q14141 434 aa6.52□□□□□ -1.37
VCP-205ENST00000479300 TCEAL1Q15170 157 aa6.52□□□□□ -1.37
VCP-205ENST00000479300 PPP2R5EQ16537 467 aa6.52□□□□□ -1.37
VCP-205ENST00000479300 EIF2S3LQ2VIR3 472 aaKnown RBP6.52□□□□□ -1.37
VCP-205ENST00000479300 HENMT1Q5T8I9 393 aaKnown RBP6.52□□□□□ -1.37
VCP-205ENST00000479300 C11orf63Q6NUN7 778 aa6.52□□□□□ -1.37
VCP-205ENST00000479300 CRTC3Q6UUV7 619 aa6.52□□□□□ -1.37
VCP-205ENST00000479300 MFSD7Q6UXD7 560 aa6.52□□□□□ -1.37
VCP-205ENST00000479300 MAMDC2Q7Z304 686 aaPredicted RBP6.52□□□□□ -1.37
VCP-205ENST00000479300 GLT6D1Q7Z4J2 308 aa6.52□□□□□ -1.37
VCP-205ENST00000479300 ZC3H18Q86VM9 953 aaKnown RBP6.52□□□□□ -1.37
VCP-205ENST00000479300 PLXDC1Q8IUK5 500 aa6.52□□□□□ -1.37
VCP-205ENST00000479300 CDKL3Q8IVW4 592 aaPredicted RBP6.52□□□□□ -1.37
VCP-205ENST00000479300 KATNAL2Q8IYT4 538 aa6.52□□□□□ -1.37
VCP-205ENST00000479300 IQCKQ8N0W5 287 aa6.52□□□□□ -1.37
VCP-205ENST00000479300 SLC25A41Q8N5S1 370 aa6.52□□□□□ -1.37
VCP-205ENST00000479300 ESX1Q8N693 406 aa6.52□□□□□ -1.37
VCP-205ENST00000479300 CNTD1Q8N815 330 aa6.52□□□□□ -1.37
VCP-205ENST00000479300 BRSK1Q8TDC3 778 aa6.52□□□□□ -1.37
VCP-205ENST00000479300 GLYATL1Q969I3 302 aa6.52□□□□□ -1.37
VCP-205ENST00000479300 CXorf40BQ96DE9 158 aa6.52□□□□□ -1.37
VCP-205ENST00000479300 TEKT5Q96M29 485 aa6.52□□□□□ -1.37
VCP-205ENST00000479300 ZIM3Q96PE6 472 aa6.52□□□□□ -1.37
VCP-205ENST00000479300 HS3ST6Q96QI5 342 aa6.52□□□□□ -1.37
VCP-205ENST00000479300 ZPBPQ9BS86 351 aa6.52□□□□□ -1.37
VCP-205ENST00000479300 EFHD1Q9BUP0 239 aa6.52□□□□□ -1.37
VCP-205ENST00000479300 ULBP3Q9BZM4 244 aa6.52□□□□□ -1.37
VCP-205ENST00000479300 TRIT1Q9H3H1 467 aaKnown RBP6.52□□□□□ -1.37
VCP-205ENST00000479300 MLXIPLQ9NP71 852 aa6.52□□□□□ -1.37
VCP-205ENST00000479300 SARS2Q9NP81 518 aaKnown RBP6.52□□□□□ -1.37
VCP-205ENST00000479300 CASS4Q9NQ75 786 aa6.52□□□□□ -1.37
VCP-205ENST00000479300 IGSF5Q9NSI5 407 aa6.52□□□□□ -1.37
VCP-205ENST00000479300 CUEDC1Q9NWM3 386 aaPredicted RBP6.52□□□□□ -1.37
VCP-205ENST00000479300 UBP1Q9NZI7 540 aa6.52□□□□□ -1.37
VCP-205ENST00000479300 LUZP4Q9P127 313 aa6.52□□□□□ -1.37
VCP-205ENST00000479300 ERRFI1Q9UJM3 462 aaPredicted RBP6.52□□□□□ -1.37
VCP-205ENST00000479300 CNOT6Q9ULM6 557 aaKnown RBP6.52□□□□□ -1.37
VCP-205ENST00000479300 VPS4AQ9UN37 437 aa6.52□□□□□ -1.37
VCP-205ENST00000479300 SRPK3Q9UPE1 567 aa6.52□□□□□ -1.37
VCP-205ENST00000479300 POLHQ9Y253 713 aa6.52□□□□□ -1.37
VCP-205ENST00000479300 PKP3Q9Y446 797 aa6.52□□□□□ -1.37
VCP-205ENST00000479300 HYOU1Q9Y4L1 999 aa6.52□□□□□ -1.37
VCP-205ENST00000479300 PCDHA13Q9Y5I0 950 aa6.52□□□□□ -1.37
VCP-205ENST00000479300 ALG6Q9Y672 507 aa6.52□□□□□ -1.37
VCP-205ENST00000479300 EPN1Q9Y6I3 576 aaPredicted RBP6.52□□□□□ -1.37
VCP-205ENST00000479300 HIVEP1P15822 2718 aa6.51□□□□□ -1.37
VCP-205ENST00000479300 F8P00451 2351 aa6.51□□□□□ -1.37
VCP-205ENST00000479300 A0A0U1RQJ8 604 aa6.51□□□□□ -1.37
VCP-205ENST00000479300 C3orf70A6NLC5 250 aaPredicted RBP6.51□□□□□ -1.37
VCP-205ENST00000479300 C2orf81A6NN90 581 aa6.51□□□□□ -1.37
VCP-205ENST00000479300 FADS2P1A8MWK0 482 aa6.51□□□□□ -1.37
VCP-205ENST00000479300 E7EVH7 732 aa6.51□□□□□ -1.37
VCP-205ENST00000479300 STX7O15400 261 aaKnown RBP6.51□□□□□ -1.37
VCP-205ENST00000479300 KCNJ13O60928 360 aa6.51□□□□□ -1.37
VCP-205ENST00000479300 KATNA1O75449 491 aa6.51□□□□□ -1.37
VCP-205ENST00000479300 CREG1O75629 220 aa6.51□□□□□ -1.37
VCP-205ENST00000479300 MT-CYBP00156 380 aaPredicted RBP6.51□□□□□ -1.37
VCP-205ENST00000479300 LDLRP01130 860 aa6.51□□□□□ -1.37
VCP-205ENST00000479300 C9P02748 559 aa6.51□□□□□ -1.37
VCP-205ENST00000479300 VIMP08670 466 aaKnown RBP6.51□□□□□ -1.37
VCP-205ENST00000479300 ANKRD34CP0C6C1 535 aa6.51□□□□□ -1.37
VCP-205ENST00000479300 F3P13726 295 aa6.51□□□□□ -1.37
VCP-205ENST00000479300 PRF1P14222 555 aa6.51□□□□□ -1.37
VCP-205ENST00000479300 ZNF7P17097 686 aaPredicted RBP6.51□□□□□ -1.37
VCP-205ENST00000479300 ZNF8P17098 575 aaPredicted RBP6.51□□□□□ -1.37
VCP-205ENST00000479300 TCP1P17987 556 aaKnown RBP6.51□□□□□ -1.37
VCP-205ENST00000479300 NFKB1P19838 968 aa6.51□□□□□ -1.37
VCP-205ENST00000479300 HLA-DPA1P20036 260 aa6.51□□□□□ -1.37
VCP-205ENST00000479300 CCND1P24385 295 aa6.51□□□□□ -1.37
VCP-205ENST00000479300 PTPN3P26045 913 aa6.51□□□□□ -1.37
VCP-205ENST00000479300 SPAM1P38567 509 aa6.51□□□□□ -1.37
VCP-205ENST00000479300 CDKN2BP42772 138 aa6.51□□□□□ -1.37
VCP-205ENST00000479300 LEPRP48357 1165 aaKnown RBP6.51□□□□□ -1.37
VCP-205ENST00000479300 CLCNKAP51800 687 aa6.51□□□□□ -1.37
VCP-205ENST00000479300 WNT3AP56704 352 aa6.51□□□□□ -1.37
VCP-205ENST00000479300 RPS18P62269 152 aaKnown RBP6.51□□□□□ -1.37
VCP-205ENST00000479300 PDE1BQ01064 536 aa6.51□□□□□ -1.37
VCP-205ENST00000479300 MPP3Q13368 585 aa6.51□□□□□ -1.37
VCP-205ENST00000479300 SEMA5AQ13591 1074 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms