RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 ALG1LQ6GMV1 187 aa7.06□□□□□ -1.28
SPTLC1-205ENST00000477888 CLEC9AQ6UXN8 241 aa7.06□□□□□ -1.28
SPTLC1-205ENST00000477888 AMZ2Q86W34 360 aa7.06□□□□□ -1.28
SPTLC1-205ENST00000477888 ZNF677Q86XU0 584 aa7.06□□□□□ -1.28
SPTLC1-205ENST00000477888 TRAPPC5Q8IUR0 188 aa7.06□□□□□ -1.28
SPTLC1-205ENST00000477888 TRAM1L1Q8N609 369 aa7.06□□□□□ -1.28
SPTLC1-205ENST00000477888 LRRN4CLQ8ND94 238 aa7.06□□□□□ -1.28
SPTLC1-205ENST00000477888 WFDC11Q8NEX6 87 aa7.06□□□□□ -1.28
SPTLC1-205ENST00000477888 OR11G2Q8NGC1 345 aa7.06□□□□□ -1.28
SPTLC1-205ENST00000477888 OR4E2Q8NGC2 313 aa7.06□□□□□ -1.28
SPTLC1-205ENST00000477888 CCHCR1Q8TD31 782 aa7.06□□□□□ -1.28
SPTLC1-205ENST00000477888 SLC20A1Q8WUM9 679 aa7.06□□□□□ -1.28
SPTLC1-205ENST00000477888 SDCCAG3Q96C92 435 aa7.06□□□□□ -1.28
SPTLC1-205ENST00000477888 DMRTA2Q96SC8 542 aa7.06□□□□□ -1.28
SPTLC1-205ENST00000477888 KCTD15Q96SI1 283 aaPredicted RBP7.06□□□□□ -1.28
SPTLC1-205ENST00000477888 PCDHB18PQ96TA0 734 aa7.06□□□□□ -1.28
SPTLC1-205ENST00000477888 SPSB2Q99619 263 aa7.06□□□□□ -1.28
SPTLC1-205ENST00000477888 SELENOOQ9BVL4 669 aa7.06□□□□□ -1.28
SPTLC1-205ENST00000477888 VPS16Q9H269 839 aa7.06□□□□□ -1.28
SPTLC1-205ENST00000477888 DHX35Q9H5Z1 703 aaKnown RBP7.06□□□□□ -1.28
SPTLC1-205ENST00000477888 FAM60AQ9NP50 221 aa7.06□□□□□ -1.28
SPTLC1-205ENST00000477888 IMP3Q9NV31 184 aaKnown RBP7.06□□□□□ -1.28
SPTLC1-205ENST00000477888 ZNF358Q9NW07 568 aa7.06□□□□□ -1.28
SPTLC1-205ENST00000477888 CWC15Q9P013 229 aaKnown RBP7.06□□□□□ -1.28
SPTLC1-205ENST00000477888 ADAM22Q9P0K1 906 aa7.06□□□□□ -1.28
SPTLC1-205ENST00000477888 NFKBIL1Q9UBC1 381 aaPredicted RBP7.06□□□□□ -1.28
SPTLC1-205ENST00000477888 MAN1B1Q9UKM7 699 aa7.06□□□□□ -1.28
SPTLC1-205ENST00000477888 CTNND2Q9UQB3 1225 aa7.06□□□□□ -1.28
SPTLC1-205ENST00000477888 RTTNQ86VV8 2226 aa7.06□□□□□ -1.28
SPTLC1-205ENST00000477888 ANKRD66B4E2M5 251 aa7.05□□□□□ -1.28
SPTLC1-205ENST00000477888 E9PLN8 166 aa7.05□□□□□ -1.28
SPTLC1-205ENST00000477888 MATN2O00339 956 aa7.05□□□□□ -1.28
SPTLC1-205ENST00000477888 BTN3A3O00478 584 aa7.05□□□□□ -1.28
SPTLC1-205ENST00000477888 PMPCBO75439 489 aa7.05□□□□□ -1.28
SPTLC1-205ENST00000477888 TOXO94900 526 aa7.05□□□□□ -1.28
SPTLC1-205ENST00000477888 ALBP02768 609 aa7.05□□□□□ -1.28
SPTLC1-205ENST00000477888 CTSBP07858 339 aa7.05□□□□□ -1.28
SPTLC1-205ENST00000477888 HOXD4P09016 255 aaPredicted RBP7.05□□□□□ -1.28
SPTLC1-205ENST00000477888 PVRP15151 417 aa7.05□□□□□ -1.28
SPTLC1-205ENST00000477888 ITGAXP20702 1163 aa7.05□□□□□ -1.28
SPTLC1-205ENST00000477888 CDK11BP21127 795 aaKnown RBP7.05□□□□□ -1.28
SPTLC1-205ENST00000477888 CES1P23141 567 aa7.05□□□□□ -1.28
SPTLC1-205ENST00000477888 MSX1P28360 303 aa7.05□□□□□ -1.28
SPTLC1-205ENST00000477888 ADSLP30566 484 aaPredicted RBP7.05□□□□□ -1.28
SPTLC1-205ENST00000477888 CDH6P55285 790 aa7.05□□□□□ -1.28
SPTLC1-205ENST00000477888 YBX1P67809 324 aaKnown RBP7.05□□□□□ -1.28
SPTLC1-205ENST00000477888 OGDHQ02218 1023 aa7.05□□□□□ -1.28
SPTLC1-205ENST00000477888 CACNG1Q06432 222 aa7.05□□□□□ -1.28
SPTLC1-205ENST00000477888 PRKAA1Q13131 559 aa7.05□□□□□ -1.28
SPTLC1-205ENST00000477888 NFE2L1Q14494 772 aa7.05□□□□□ -1.28
SPTLC1-205ENST00000477888 NKG7Q16617 165 aa7.05□□□□□ -1.28
SPTLC1-205ENST00000477888 TUBB8Q3ZCM7 444 aa7.05□□□□□ -1.28
SPTLC1-205ENST00000477888 KRTCAP3Q53RY4 240 aa7.05□□□□□ -1.28
SPTLC1-205ENST00000477888 KLHDC7AQ5VTJ3 777 aa7.05□□□□□ -1.28
SPTLC1-205ENST00000477888 CYP4V2Q6ZWL3 525 aaPredicted RBP7.05□□□□□ -1.28
SPTLC1-205ENST00000477888 OVCH1Q7RTY7 1134 aa7.05□□□□□ -1.28
SPTLC1-205ENST00000477888 TMC3Q7Z5M5 1100 aa7.05□□□□□ -1.28
SPTLC1-205ENST00000477888 PHF13Q86YI8 300 aaPredicted RBP7.05□□□□□ -1.28
SPTLC1-205ENST00000477888 DOLPP1Q86YN1 238 aa7.05□□□□□ -1.28
SPTLC1-205ENST00000477888 FAM20CQ8IXL6 584 aa7.05□□□□□ -1.28
SPTLC1-205ENST00000477888 LPCAT1Q8NF37 534 aa7.05□□□□□ -1.28
SPTLC1-205ENST00000477888 ARRDC2Q8TBH0 407 aa7.05□□□□□ -1.28
SPTLC1-205ENST00000477888 AGAP11Q8TF27 550 aa7.05□□□□□ -1.28
SPTLC1-205ENST00000477888 CPLX3Q8WVH0 158 aa7.05□□□□□ -1.28
SPTLC1-205ENST00000477888 MBD6Q96DN6 1003 aa7.05□□□□□ -1.28
SPTLC1-205ENST00000477888 MAGED4Q96JG8 741 aa7.05□□□□□ -1.28
SPTLC1-205ENST00000477888 GPR137Q96N19 417 aa7.05□□□□□ -1.28
SPTLC1-205ENST00000477888 PEBP4Q96S96 227 aa7.05□□□□□ -1.28
SPTLC1-205ENST00000477888 VKORC1Q9BQB6 163 aa7.05□□□□□ -1.28
SPTLC1-205ENST00000477888 MESP1Q9BRJ9 268 aa7.05□□□□□ -1.28
SPTLC1-205ENST00000477888 POLR1EQ9GZS1 481 aaKnown RBP7.05□□□□□ -1.28
SPTLC1-205ENST00000477888 KLHL25Q9H0H3 589 aa7.05□□□□□ -1.28
SPTLC1-205ENST00000477888 SLC26A1Q9H2B4 701 aa7.05□□□□□ -1.28
SPTLC1-205ENST00000477888 WDR54Q9H977 334 aa7.05□□□□□ -1.28
SPTLC1-205ENST00000477888 MRM3Q9HC36 420 aaKnown RBP7.05□□□□□ -1.28
SPTLC1-205ENST00000477888 CBX8Q9HC52 389 aa7.05□□□□□ -1.28
SPTLC1-205ENST00000477888 PCDH9Q9HC56 1237 aa7.05□□□□□ -1.28
SPTLC1-205ENST00000477888 NT5MQ9NPB1 228 aa7.05□□□□□ -1.28
SPTLC1-205ENST00000477888 ETNK2Q9NVF9 386 aa7.05□□□□□ -1.28
SPTLC1-205ENST00000477888 DNAJB12Q9NXW2 375 aaKnown RBP7.05□□□□□ -1.28
SPTLC1-205ENST00000477888 PTGFRNQ9P2B2 879 aa7.05□□□□□ -1.28
SPTLC1-205ENST00000477888 ADAM21Q9UKJ8 722 aa7.05□□□□□ -1.28
SPTLC1-205ENST00000477888 MRPS2Q9Y399 296 aaKnown RBP7.05□□□□□ -1.28
SPTLC1-205ENST00000477888 GSAPA4D1B5 854 aa7.04□□□□□ -1.28
SPTLC1-205ENST00000477888 SMAPO00193 183 aa7.04□□□□□ -1.28
SPTLC1-205ENST00000477888 ZSCAN9O15535 394 aaPredicted RBP7.04□□□□□ -1.28
SPTLC1-205ENST00000477888 CTAG2O75638 210 aa7.04□□□□□ -1.28
SPTLC1-205ENST00000477888 USP1O94782 785 aa7.04□□□□□ -1.28
SPTLC1-205ENST00000477888 ZWINTO95229 277 aa7.04□□□□□ -1.28
SPTLC1-205ENST00000477888 FGFR1OPO95684 399 aaKnown RBP7.04□□□□□ -1.28
SPTLC1-205ENST00000477888 WDPCPO95876 746 aa7.04□□□□□ -1.28
SPTLC1-205ENST00000477888 HPP00738 406 aa7.04□□□□□ -1.28
SPTLC1-205ENST00000477888 F10P00742 488 aa7.04□□□□□ -1.28
SPTLC1-205ENST00000477888 HLA-DPA1P20036 260 aa7.04□□□□□ -1.28
SPTLC1-205ENST00000477888 HOXC12P31275 282 aa7.04□□□□□ -1.28
SPTLC1-205ENST00000477888 CTSCP53634 463 aa7.04□□□□□ -1.28
SPTLC1-205ENST00000477888 PMP22Q01453 160 aa7.04□□□□□ -1.28
SPTLC1-205ENST00000477888 DSC2Q02487 901 aa7.04□□□□□ -1.28
SPTLC1-205ENST00000477888 ITKQ08881 620 aa7.04□□□□□ -1.28
SPTLC1-205ENST00000477888 NIPAL4Q0D2K0 466 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms