RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 MS4A14Q96JA4 679 aa21.15■□□□□ 0.98
COL9A3-211ENST00000477612 SLC45A3Q96JT2 553 aa21.15■□□□□ 0.98
COL9A3-211ENST00000477612 CARD6Q9BX69 1037 aa21.15■□□□□ 0.98
COL9A3-211ENST00000477612 KCNF1Q9H3M0 494 aa21.15■□□□□ 0.98
COL9A3-211ENST00000477612 POMT2Q9UKY4 750 aa21.15■□□□□ 0.98
COL9A3-211ENST00000477612 BTRCQ9Y297 605 aa21.15■□□□□ 0.98
COL9A3-211ENST00000477612 TCRBV7S3A2A0A539 114 aa21.14■□□□□ 0.97
COL9A3-211ENST00000477612 UBA6A0AVT1 1052 aaPredicted RBP21.14■□□□□ 0.97
COL9A3-211ENST00000477612 SPAG6O75602 509 aa21.14■□□□□ 0.97
COL9A3-211ENST00000477612 ZBTB11O95625 1053 aaPredicted RBP21.14■□□□□ 0.97
COL9A3-211ENST00000477612 PRB1P04280 392 aa21.14■□□□□ 0.97
COL9A3-211ENST00000477612 FOLR1P15328 257 aa21.14■□□□□ 0.97
COL9A3-211ENST00000477612 POLR2CP19387 275 aaPredicted RBP21.14■□□□□ 0.97
COL9A3-211ENST00000477612 HSD11B2P80365 405 aa21.14■□□□□ 0.97
COL9A3-211ENST00000477612 PRKAA1Q13131 559 aa21.14■□□□□ 0.97
COL9A3-211ENST00000477612 ARMC6Q6NXE6 501 aa21.14■□□□□ 0.97
COL9A3-211ENST00000477612 PPP1R3BQ86XI6 285 aa21.14■□□□□ 0.97
COL9A3-211ENST00000477612 SLC35F6Q8N357 371 aa21.14■□□□□ 0.97
COL9A3-211ENST00000477612 OR52E1Q8NGJ3 308 aa21.14■□□□□ 0.97
COL9A3-211ENST00000477612 ACTRT1Q8TDG2 376 aa21.14■□□□□ 0.97
COL9A3-211ENST00000477612 LCN9Q8WX39 176 aa21.14■□□□□ 0.97
COL9A3-211ENST00000477612 MAGOHBQ96A72 148 aaKnown RBP21.14■□□□□ 0.97
COL9A3-211ENST00000477612 NAP1L3Q99457 506 aaPredicted RBP21.14■□□□□ 0.97
COL9A3-211ENST00000477612 ULBP3Q9BZM4 244 aa21.14■□□□□ 0.97
COL9A3-211ENST00000477612 TWSG1Q9GZX9 223 aa21.14■□□□□ 0.97
COL9A3-211ENST00000477612 SRMSQ9H3Y6 488 aa21.14■□□□□ 0.97
COL9A3-211ENST00000477612 PDE7BQ9NP56 450 aa21.14■□□□□ 0.97
COL9A3-211ENST00000477612 C1GALT1Q9NS00 363 aa21.14■□□□□ 0.97
COL9A3-211ENST00000477612 CATSPERZQ9NTU4 200 aa21.14■□□□□ 0.97
COL9A3-211ENST00000477612 ANAPC5Q9UJX4 755 aa21.14■□□□□ 0.97
COL9A3-211ENST00000477612 NEU2Q9Y3R4 380 aa21.14■□□□□ 0.97
COL9A3-211ENST00000477612 SPTBP11277 2137 aa21.14■□□□□ 0.97
COL9A3-211ENST00000477612 SNRNP200O75643 2136 aaKnown RBP21.13■□□□□ 0.97
COL9A3-211ENST00000477612 PIEZO2Q9H5I5 2752 aa21.13■□□□□ 0.97
COL9A3-211ENST00000477612 BHMG1C9JSJ3 638 aaPredicted RBP21.13■□□□□ 0.97
COL9A3-211ENST00000477612 CES2O00748 559 aa21.13■□□□□ 0.97
COL9A3-211ENST00000477612 CD3EAPO15446 510 aaKnown RBP21.13■□□□□ 0.97
COL9A3-211ENST00000477612 KRT14P02533 472 aa21.13■□□□□ 0.97
COL9A3-211ENST00000477612 NMBRP28336 390 aa21.13■□□□□ 0.97
COL9A3-211ENST00000477612 COILP38432 576 aaPredicted RBP21.13■□□□□ 0.97
COL9A3-211ENST00000477612 STAT5AP42229 794 aa21.13■□□□□ 0.97
COL9A3-211ENST00000477612 TTPAP49638 278 aa21.13■□□□□ 0.97
COL9A3-211ENST00000477612 CRADDP78560 199 aa21.13■□□□□ 0.97
COL9A3-211ENST00000477612 RASGRP3Q8IV61 690 aa21.13■□□□□ 0.97
COL9A3-211ENST00000477612 TBC1D21Q8IYX1 336 aa21.13■□□□□ 0.97
COL9A3-211ENST00000477612 MPP5Q8N3R9 675 aa21.13■□□□□ 0.97
COL9A3-211ENST00000477612 RARRES3Q9UL19 164 aa21.13■□□□□ 0.97
COL9A3-211ENST00000477612 FASNP49327 2511 aaKnown RBP21.13■□□□□ 0.97
COL9A3-211ENST00000477612 BTN3A3O00478 584 aa21.12■□□□□ 0.97
COL9A3-211ENST00000477612 BTN3A1O00481 513 aa21.12■□□□□ 0.97
COL9A3-211ENST00000477612 GPC4O75487 556 aa21.12■□□□□ 0.97
COL9A3-211ENST00000477612 MGAT1P26572 445 aa21.12■□□□□ 0.97
COL9A3-211ENST00000477612 PRDX3P30048 256 aaKnown RBP21.12■□□□□ 0.97
COL9A3-211ENST00000477612 CCR7P32248 378 aa21.12■□□□□ 0.97
COL9A3-211ENST00000477612 SARNPP82979 210 aaKnown RBP21.12■□□□□ 0.97
COL9A3-211ENST00000477612 C19orf57Q0VDD7 668 aa21.12■□□□□ 0.97
COL9A3-211ENST00000477612 CRTC2Q53ET0 693 aaPredicted RBP21.12■□□□□ 0.97
COL9A3-211ENST00000477612 C6orf15Q6UXA7 325 aaPredicted RBP21.12■□□□□ 0.97
COL9A3-211ENST00000477612 AMIGO1Q86WK6 493 aa21.12■□□□□ 0.97
COL9A3-211ENST00000477612 ADGRF3Q8IZF5 1079 aa21.12■□□□□ 0.97
COL9A3-211ENST00000477612 ZNF843Q8N446 348 aa21.12■□□□□ 0.97
COL9A3-211ENST00000477612 KIAA1143Q96AT1 154 aaPredicted RBP21.12■□□□□ 0.97
COL9A3-211ENST00000477612 MED8Q96G25 268 aa21.12■□□□□ 0.97
COL9A3-211ENST00000477612 OSBPL9Q96SU4 736 aa21.12■□□□□ 0.97
COL9A3-211ENST00000477612 AP1M1Q9BXS5 423 aa21.12■□□□□ 0.97
COL9A3-211ENST00000477612 PITPNM3Q9BZ71 974 aa21.12■□□□□ 0.97
COL9A3-211ENST00000477612 SEMA4CQ9C0C4 833 aa21.12■□□□□ 0.97
COL9A3-211ENST00000477612 P2RY12Q9H244 342 aa21.12■□□□□ 0.97
COL9A3-211ENST00000477612 GPN2Q9H9Y4 310 aaPredicted RBP21.12■□□□□ 0.97
COL9A3-211ENST00000477612 FGF21Q9NSA1 209 aa21.12■□□□□ 0.97
COL9A3-211ENST00000477612 SYBUQ9NX95 663 aa21.12■□□□□ 0.97
COL9A3-211ENST00000477612 MARCH4Q9P2E8 410 aaPredicted RBP21.12■□□□□ 0.97
COL9A3-211ENST00000477612 POLG2Q9UHN1 485 aa21.12■□□□□ 0.97
COL9A3-211ENST00000477612 SOX13Q9UN79 622 aa21.12■□□□□ 0.97
COL9A3-211ENST00000477612 CDYLQ9Y232 598 aa21.12■□□□□ 0.97
COL9A3-211ENST00000477612 CFAP46Q8IYW2 2715 aa21.11■□□□□ 0.97
COL9A3-211ENST00000477612 ZNF891A8MT65 544 aaPredicted RBP21.11■□□□□ 0.97
COL9A3-211ENST00000477612 PGRMC1O00264 195 aaKnown RBP21.11■□□□□ 0.97
COL9A3-211ENST00000477612 PRMT5O14744 637 aaPredicted RBP21.11■□□□□ 0.97
COL9A3-211ENST00000477612 TERTO14746 1132 aaKnown RBP21.11■□□□□ 0.97
COL9A3-211ENST00000477612 KIAA0754O94854 1291 aa21.11■□□□□ 0.97
COL9A3-211ENST00000477612 MT-ND3P03897 115 aa21.11■□□□□ 0.97
COL9A3-211ENST00000477612 MSL3P1P0C860 447 aa21.11■□□□□ 0.97
COL9A3-211ENST00000477612 EBLN1P0CF75 366 aa21.11■□□□□ 0.97
COL9A3-211ENST00000477612 RPS3P23396 243 aaKnown RBP eCLIP21.11■□□□□ 0.976e-12■■□□□ 13.1
COL9A3-211ENST00000477612 ARNTP27540 789 aa21.11■□□□□ 0.97
COL9A3-211ENST00000477612 GPS1Q13098 491 aa21.11■□□□□ 0.97
COL9A3-211ENST00000477612 TUBB3Q13509 450 aa21.11■□□□□ 0.97
COL9A3-211ENST00000477612 COL9A2Q14055 689 aaPredicted RBP21.11■□□□□ 0.97
COL9A3-211ENST00000477612 LY6DQ14210 128 aa21.11■□□□□ 0.97
COL9A3-211ENST00000477612 KCNAB1Q14722 419 aa21.11■□□□□ 0.97
COL9A3-211ENST00000477612 TRIP13Q15645 432 aaPredicted RBP21.11■□□□□ 0.97
COL9A3-211ENST00000477612 CCDC137Q6PK04 289 aaKnown RBP21.11■□□□□ 0.97
COL9A3-211ENST00000477612 CAND1Q86VP6 1230 aaKnown RBP21.11■□□□□ 0.97
COL9A3-211ENST00000477612 SLC22A15Q8IZD6 547 aa21.11■□□□□ 0.97
COL9A3-211ENST00000477612 OR5AR1Q8NGP9 310 aa21.11■□□□□ 0.97
COL9A3-211ENST00000477612 OR8K5Q8NH50 307 aa21.11■□□□□ 0.97
COL9A3-211ENST00000477612 OR5K2Q8NHB8 316 aa21.11■□□□□ 0.97
COL9A3-211ENST00000477612 COG1Q8WTW3 980 aa21.11■□□□□ 0.97
COL9A3-211ENST00000477612 ZNF501Q96CX3 271 aaPredicted RBP21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms