RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 ELMO2Q96JJ3 720 aa8.08□□□□□ -1.12
HDAC6-221ENST00000477561 BBC3Q96PG8 261 aaPredicted RBP8.08□□□□□ -1.12
HDAC6-221ENST00000477561 FERD3LQ96RJ6 166 aa8.08□□□□□ -1.12
HDAC6-221ENST00000477561 RANBP9Q96S59 729 aa8.08□□□□□ -1.12
HDAC6-221ENST00000477561 FMO2Q99518 471 aa8.08□□□□□ -1.12
HDAC6-221ENST00000477561 CCM2Q9BSQ5 444 aa8.08□□□□□ -1.12
HDAC6-221ENST00000477561 ACBD3Q9H3P7 528 aa8.08□□□□□ -1.12
HDAC6-221ENST00000477561 EPB41L1Q9H4G0 881 aa8.08□□□□□ -1.12
HDAC6-221ENST00000477561 COG4Q9H9E3 785 aa8.08□□□□□ -1.12
HDAC6-221ENST00000477561 ANAPC5Q9UJX4 755 aa8.08□□□□□ -1.12
HDAC6-221ENST00000477561 PCDHB11Q9Y5F2 797 aa8.08□□□□□ -1.12
HDAC6-221ENST00000477561 MN1Q10571 1320 aaPredicted RBP8.07□□□□□ -1.12
HDAC6-221ENST00000477561 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.07□□□□□ -1.12
HDAC6-221ENST00000477561 C17orf113A0A1B0GUU1 675 aa8.07□□□□□ -1.12
HDAC6-221ENST00000477561 DNALI1O14645 258 aaPredicted RBP8.07□□□□□ -1.12
HDAC6-221ENST00000477561 AVILO75366 819 aa8.07□□□□□ -1.12
HDAC6-221ENST00000477561 SEC31AO94979 1220 aaKnown RBP8.07□□□□□ -1.12
HDAC6-221ENST00000477561 MYBL2P10244 700 aa8.07□□□□□ -1.12
HDAC6-221ENST00000477561 PSMA3P25788 255 aa8.07□□□□□ -1.12
HDAC6-221ENST00000477561 MGAT1P26572 445 aa8.07□□□□□ -1.12
HDAC6-221ENST00000477561 NMBRP28336 390 aa8.07□□□□□ -1.12
HDAC6-221ENST00000477561 NSG1P42857 185 aa8.07□□□□□ -1.12
HDAC6-221ENST00000477561 CSE1LP55060 971 aaKnown RBP8.07□□□□□ -1.12
HDAC6-221ENST00000477561 UCNP55089 124 aa8.07□□□□□ -1.12
HDAC6-221ENST00000477561 SH3BP2P78314 561 aa8.07□□□□□ -1.12
HDAC6-221ENST00000477561 PRAMEP78395 509 aa8.07□□□□□ -1.12
HDAC6-221ENST00000477561 MC2RQ01718 297 aa8.07□□□□□ -1.12
HDAC6-221ENST00000477561 VAC14Q08AM6 782 aa8.07□□□□□ -1.12
HDAC6-221ENST00000477561 PRKG2Q13237 762 aa8.07□□□□□ -1.12
HDAC6-221ENST00000477561 LAMB3Q13751 1172 aa8.07□□□□□ -1.12
HDAC6-221ENST00000477561 SLMAPQ14BN4 828 aa8.07□□□□□ -1.12
HDAC6-221ENST00000477561 MORF4L2Q15014 288 aa8.07□□□□□ -1.12
HDAC6-221ENST00000477561 SOWAHCQ53LP3 525 aaPredicted RBP8.07□□□□□ -1.12
HDAC6-221ENST00000477561 FASTKD1Q53R41 847 aaKnown RBP8.07□□□□□ -1.12
HDAC6-221ENST00000477561 PCID2Q5JVF3 399 aa8.07□□□□□ -1.12
HDAC6-221ENST00000477561 MANEAQ5SRI9 462 aa8.07□□□□□ -1.12
HDAC6-221ENST00000477561 DCAF12Q5T6F0 453 aa8.07□□□□□ -1.12
HDAC6-221ENST00000477561 ANKRD22Q5VYY1 191 aa8.07□□□□□ -1.12
HDAC6-221ENST00000477561 KIAA1614Q5VZ46 1190 aa8.07□□□□□ -1.12
HDAC6-221ENST00000477561 IZUMO3Q5VZ72 239 aa8.07□□□□□ -1.12
HDAC6-221ENST00000477561 CAPRIN2Q6IMN6 1127 aaKnown RBP8.07□□□□□ -1.12
HDAC6-221ENST00000477561 AFTPHQ6ULP2 937 aa8.07□□□□□ -1.12
HDAC6-221ENST00000477561 CERS6Q6ZMG9 384 aa8.07□□□□□ -1.12
HDAC6-221ENST00000477561 GSPT2Q8IYD1 628 aaKnown RBP8.07□□□□□ -1.12
HDAC6-221ENST00000477561 OR4E2Q8NGC2 313 aa8.07□□□□□ -1.12
HDAC6-221ENST00000477561 SLC39A7Q92504 469 aa8.07□□□□□ -1.12
HDAC6-221ENST00000477561 ELMO1Q92556 727 aa8.07□□□□□ -1.12
HDAC6-221ENST00000477561 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.07□□□□□ -1.12
HDAC6-221ENST00000477561 ZDHHC12Q96GR4 267 aa8.07□□□□□ -1.12
HDAC6-221ENST00000477561 CCNL2Q96S94 520 aaPredicted RBP8.07□□□□□ -1.12
HDAC6-221ENST00000477561 OR52A5Q9H2C5 316 aa8.07□□□□□ -1.12
HDAC6-221ENST00000477561 EIF2B3Q9NR50 452 aaKnown RBP8.07□□□□□ -1.12
HDAC6-221ENST00000477561 HRASLS2Q9NWW9 162 aa8.07□□□□□ -1.12
HDAC6-221ENST00000477561 SYBUQ9NX95 663 aa8.07□□□□□ -1.12
HDAC6-221ENST00000477561 GRHL1Q9NZI5 618 aa8.07□□□□□ -1.12
HDAC6-221ENST00000477561 SLC24A2Q9UI40 661 aa8.07□□□□□ -1.12
HDAC6-221ENST00000477561 ACSL6Q9UKU0 697 aa8.07□□□□□ -1.12
HDAC6-221ENST00000477561 PCDHGA3Q9Y5H0 932 aa8.07□□□□□ -1.12
HDAC6-221ENST00000477561 LOC400499M0QZD8 3231 aa8.07□□□□□ -1.12
HDAC6-221ENST00000477561 IGHV5-51A0A0C4DH38 117 aa8.06□□□□□ -1.12
HDAC6-221ENST00000477561 TEX51A0A1B0GUA7 166 aa8.06□□□□□ -1.12
HDAC6-221ENST00000477561 KLHL33A6NCF5 533 aa8.06□□□□□ -1.12
HDAC6-221ENST00000477561 OR6C74A6NCV1 312 aa8.06□□□□□ -1.12
HDAC6-221ENST00000477561 OR5K3A6NET4 321 aa8.06□□□□□ -1.12
HDAC6-221ENST00000477561 IQCF5A8MTL0 148 aa8.06□□□□□ -1.12
HDAC6-221ENST00000477561 GOLGA8KD6RF30 607 aa8.06□□□□□ -1.12
HDAC6-221ENST00000477561 STMND1H3BQB6 276 aa8.06□□□□□ -1.12
HDAC6-221ENST00000477561 GOLGA8TH3BQL2 631 aa8.06□□□□□ -1.12
HDAC6-221ENST00000477561 GOLGA8MH3BSY2 632 aa8.06□□□□□ -1.12
HDAC6-221ENST00000477561 K7ENP7 123 aa8.06□□□□□ -1.12
HDAC6-221ENST00000477561 IFRD1O00458 451 aaPredicted RBP8.06□□□□□ -1.12
HDAC6-221ENST00000477561 POLR1CO15160 346 aaPredicted RBP8.06□□□□□ -1.12
HDAC6-221ENST00000477561 CD3EAPO15446 510 aaKnown RBP8.06□□□□□ -1.12
HDAC6-221ENST00000477561 AP2A2O94973 939 aa8.06□□□□□ -1.12
HDAC6-221ENST00000477561 ANKRD34CP0C6C1 535 aa8.06□□□□□ -1.12
HDAC6-221ENST00000477561 OR56A5P0C7T3 313 aa8.06□□□□□ -1.12
HDAC6-221ENST00000477561 POLR2CP19387 275 aaPredicted RBP8.06□□□□□ -1.12
HDAC6-221ENST00000477561 WT1P19544 449 aaPredicted RBP8.06□□□□□ -1.12
HDAC6-221ENST00000477561 IVDP26440 423 aa8.06□□□□□ -1.12
HDAC6-221ENST00000477561 CD82P27701 267 aa8.06□□□□□ -1.12
HDAC6-221ENST00000477561 ECHS1P30084 290 aa8.06□□□□□ -1.12
HDAC6-221ENST00000477561 NPY2RP49146 381 aa8.06□□□□□ -1.12
HDAC6-221ENST00000477561 ITGA8P53708 1063 aa8.06□□□□□ -1.12
HDAC6-221ENST00000477561 RAB15P59190 212 aa8.06□□□□□ -1.12
HDAC6-221ENST00000477561 ACVR1Q04771 509 aa8.06□□□□□ -1.12
HDAC6-221ENST00000477561 BOP1Q14137 746 aaKnown RBP8.06□□□□□ -1.12
HDAC6-221ENST00000477561 ITIH4Q14624 930 aa8.06□□□□□ -1.12
HDAC6-221ENST00000477561 KCNJ11Q14654 390 aa8.06□□□□□ -1.12
HDAC6-221ENST00000477561 KCNAB1Q14722 419 aa8.06□□□□□ -1.12
HDAC6-221ENST00000477561 TRADDQ15628 312 aa8.06□□□□□ -1.12
HDAC6-221ENST00000477561 ZNF658BQ4V348 819 aaPredicted RBP8.06□□□□□ -1.12
HDAC6-221ENST00000477561 LYPLAL1Q5VWZ2 237 aa8.06□□□□□ -1.12
HDAC6-221ENST00000477561 HIBCHQ6NVY1 386 aaPredicted RBP8.06□□□□□ -1.12
HDAC6-221ENST00000477561 LRRC8BQ6P9F7 803 aa8.06□□□□□ -1.12
HDAC6-221ENST00000477561 ZNF449Q6P9G9 518 aa8.06□□□□□ -1.12
HDAC6-221ENST00000477561 INO80CQ6PI98 192 aaPredicted RBP8.06□□□□□ -1.12
HDAC6-221ENST00000477561 ZDHHC24Q6UX98 284 aa8.06□□□□□ -1.12
HDAC6-221ENST00000477561 CEACAM20Q6UY09 585 aa8.06□□□□□ -1.12
HDAC6-221ENST00000477561 NLRP9Q7RTR0 991 aa8.06□□□□□ -1.12
HDAC6-221ENST00000477561 HOOK3Q86VS8 718 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms