RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 DHDHQ9UQ10 334 aa2.85□□□□□ -1.95
HMGN4-202ENST00000477243 CHMP2BQ9UQN3 213 aa2.85□□□□□ -1.95
HMGN4-202ENST00000477243 NUDCQ9Y266 331 aa2.85□□□□□ -1.95
HMGN4-202ENST00000477243 FAM96BQ9Y3D0 163 aa2.85□□□□□ -1.95
HMGN4-202ENST00000477243 MFHAS1Q9Y4C4 1052 aa2.85□□□□□ -1.95
HMGN4-202ENST00000477243 RBM8AQ9Y5S9 174 aaKnown RBP2.85□□□□□ -1.95
HMGN4-202ENST00000477243 ZNF541Q9H0D2 1346 aa2.85□□□□□ -1.95
HMGN4-202ENST00000477243 PAPPAQ13219 1627 aa2.85□□□□□ -1.95
HMGN4-202ENST00000477243 BRD4O60885 1362 aaPredicted RBP2.85□□□□□ -1.95
HMGN4-202ENST00000477243 SPTBN2O15020 2390 aa2.85□□□□□ -1.95
HMGN4-202ENST00000477243 TECPR2O15040 1411 aa2.85□□□□□ -1.95
HMGN4-202ENST00000477243 USP9YO00507 2555 aaPredicted RBP2.84□□□□□ -1.95
HMGN4-202ENST00000477243 INO80Q9ULG1 1556 aaPredicted RBP2.84□□□□□ -1.95
HMGN4-202ENST00000477243 LAMC1P11047 1609 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 A0A0A6YYC8 382 aaPredicted RBP2.84□□□□□ -1.95
HMGN4-202ENST00000477243 A0A0G2JLW4 131 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 CCDC195A0A1B0GUA6 201 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 FAM240BA0A1B0GVZ2 78 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 SERTM2A0A1B0GWG4 89 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 OR6C68A6NDL8 312 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 PCP4L1A6NKN8 68 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 ZNF716A6NP11 495 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 KIAA1324LA8MWY0 1029 aaPredicted RBP2.84□□□□□ -1.95
HMGN4-202ENST00000477243 HSBP1L1C9JCN9 74 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 SPECC1L-ADORA2AF8WAN1 911 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 STMND1H3BQB6 276 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 I3L1I5 382 aaPredicted RBP2.84□□□□□ -1.95
HMGN4-202ENST00000477243 M0QZQ0 153 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 SNAP23O00161 211 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 WRBO00258 174 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 NVLO15381 856 aaKnown RBP2.84□□□□□ -1.95
HMGN4-202ENST00000477243 MAGEB2O15479 319 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 OGG1O15527 345 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 LRRTM2O43300 516 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 PLRG1O43660 514 aaKnown RBP2.84□□□□□ -1.95
HMGN4-202ENST00000477243 SELENOFO60613 162 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 TSPAN1O60635 241 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 PRAMEF11O60813 436 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 ATG13O75143 517 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 TRIM3O75382 744 aaPredicted RBP2.84□□□□□ -1.95
HMGN4-202ENST00000477243 JRKO75564 520 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 VNN2O95498 520 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 MT-CYBP00156 380 aaPredicted RBP2.84□□□□□ -1.95
HMGN4-202ENST00000477243 KRT14P02533 472 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 CXCL10P02778 98 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 CYP1A2P05177 515 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 TPM3P06753 285 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 CHRM2P08172 466 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 SPATA31D3P0C874 917 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 ZNF735P0CB33 412 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 LYL1P12980 280 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 ATF2P15336 505 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 ANXA7P20073 488 aaKnown RBP2.84□□□□□ -1.95
HMGN4-202ENST00000477243 CYP2F1P24903 491 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 PTPN6P29350 595 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 TIA1P31483 386 aaKnown RBP eCLIP2.84□□□□□ -1.95
HMGN4-202ENST00000477243 SLC6A6P31641 620 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 CXCR5P32302 372 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 SLC16A2P36021 539 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 CAPGP40121 348 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 PRCPP42785 496 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 PTPN9P43378 593 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 GATA4P43694 442 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 KCNQ1P51787 676 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 ZNF134P52741 427 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 AP3M2P53677 418 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 CDH13P55290 713 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 CARD18P57730 90 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 RAP2BP61225 183 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 PRR5P85299 388 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 GCNT1Q02742 428 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 ARHGAP1Q07960 439 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 TMEM62Q0P6H9 643 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 DNAJC3Q13217 504 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 MRPL49Q13405 166 aaKnown RBP2.84□□□□□ -1.95
HMGN4-202ENST00000477243 HNRNPDQ14103 355 aaKnown RBP2.84□□□□□ -1.95
HMGN4-202ENST00000477243 PDK3Q15120 406 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 STXBP2Q15833 593 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 SSX2Q16385 188 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 VWC2Q2TAL6 325 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 FAM174BQ3ZCQ3 159 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 IQCCQ4KMZ1 466 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 EPC2Q52LR7 807 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 TMEM41BQ5BJD5 291 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 SGO1Q5FBB7 561 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 CXorf66Q5JRM2 361 aaPredicted RBP2.84□□□□□ -1.95
HMGN4-202ENST00000477243 C6orf141Q5SZD1 244 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 GCNT6Q5T4J0 391 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 PRAMEF8Q5VWM4 474 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 KCTD11Q693B1 232 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 RGS7BPQ6MZT1 257 aaPredicted RBP2.84□□□□□ -1.95
HMGN4-202ENST00000477243 TAPT1Q6NXT6 567 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 PMF1Q6P1K2 205 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 C16orf89Q6UX73 402 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 KIF6Q6ZMV9 814 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 CLEC17AQ6ZS10 378 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 C1orf229Q6ZS94 237 aaPredicted RBP2.84□□□□□ -1.95
HMGN4-202ENST00000477243 ZBTB49Q6ZSB9 765 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 SPATA31D4Q6ZUB0 917 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 TRILQ7L0X0 811 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms