RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 NXNL1Q96CM4 212 aa4.64□□□□□ -1.67
PTCD3-211ENST00000476215 ZNF354BQ96LW1 612 aa4.64□□□□□ -1.67
PTCD3-211ENST00000476215 ZNF830Q96NB3 372 aaPredicted RBP4.64□□□□□ -1.67
PTCD3-211ENST00000476215 NODALQ96S42 347 aa4.64□□□□□ -1.67
PTCD3-211ENST00000476215 OPA3Q9H6K4 179 aa4.64□□□□□ -1.67
PTCD3-211ENST00000476215 EQTNQ9NQ60 294 aa4.64□□□□□ -1.67
PTCD3-211ENST00000476215 FAM118AQ9NWS6 357 aa4.64□□□□□ -1.67
PTCD3-211ENST00000476215 DDX25Q9UHL0 483 aaKnown RBP4.64□□□□□ -1.67
PTCD3-211ENST00000476215 GRIP1Q9Y3R0 1128 aa4.64□□□□□ -1.67
PTCD3-211ENST00000476215 A0A0B4J293 547 aa4.63□□□□□ -1.67
PTCD3-211ENST00000476215 TCRBV21S2A2A0A5A6 115 aa4.63□□□□□ -1.67
PTCD3-211ENST00000476215 TRBC2A0A5B9 178 aa4.63□□□□□ -1.67
PTCD3-211ENST00000476215 FAM172BPA6NC97 362 aa4.63□□□□□ -1.67
PTCD3-211ENST00000476215 TRUB2O95900 331 aaKnown RBP4.63□□□□□ -1.67
PTCD3-211ENST00000476215 NR3C1P04150 777 aa4.63□□□□□ -1.67
PTCD3-211ENST00000476215 MSH3P20585 1137 aa4.63□□□□□ -1.67
PTCD3-211ENST00000476215 EPHA2P29317 976 aa4.63□□□□□ -1.67
PTCD3-211ENST00000476215 CCR3P51677 355 aa4.63□□□□□ -1.67
PTCD3-211ENST00000476215 THOP1P52888 689 aa4.63□□□□□ -1.67
PTCD3-211ENST00000476215 PHEXP78562 749 aa4.63□□□□□ -1.67
PTCD3-211ENST00000476215 ALCAMQ13740 583 aa4.63□□□□□ -1.67
PTCD3-211ENST00000476215 RNASEH2BQ5TBB1 312 aaKnown RBP4.63□□□□□ -1.67
PTCD3-211ENST00000476215 GRTP1Q5TC63 336 aa4.63□□□□□ -1.67
PTCD3-211ENST00000476215 C19orf48Q6RUI8 117 aa4.63□□□□□ -1.67
PTCD3-211ENST00000476215 ANO5Q75V66 913 aa4.63□□□□□ -1.67
PTCD3-211ENST00000476215 ZNF595Q8IYB9 648 aa4.63□□□□□ -1.67
PTCD3-211ENST00000476215 TC2NQ8N9U0 490 aa4.63□□□□□ -1.67
PTCD3-211ENST00000476215 MOSPD2Q8NHP6 518 aa4.63□□□□□ -1.67
PTCD3-211ENST00000476215 LRRC8CQ8TDW0 803 aa4.63□□□□□ -1.67
PTCD3-211ENST00000476215 SNRNP27Q8WVK2 155 aaKnown RBP4.63□□□□□ -1.67
PTCD3-211ENST00000476215 STAMBPL1Q96FJ0 436 aa4.63□□□□□ -1.67
PTCD3-211ENST00000476215 PGAP3Q96FM1 320 aaPredicted RBP4.63□□□□□ -1.67
PTCD3-211ENST00000476215 SERINC2Q96SA4 455 aa4.63□□□□□ -1.67
PTCD3-211ENST00000476215 MMP28Q9H239 520 aa4.63□□□□□ -1.67
PTCD3-211ENST00000476215 ACKR4Q9NPB9 350 aa4.63□□□□□ -1.67
PTCD3-211ENST00000476215 OLFML3Q9NRN5 406 aa4.63□□□□□ -1.67
PTCD3-211ENST00000476215 OLAHQ9NV23 265 aa4.63□□□□□ -1.67
PTCD3-211ENST00000476215 HYKKA2RU49 373 aa4.62□□□□□ -1.67
PTCD3-211ENST00000476215 PRKNO60260 465 aaPredicted RBP4.62□□□□□ -1.67
PTCD3-211ENST00000476215 OR2T7P0C7T2 308 aa4.62□□□□□ -1.67
PTCD3-211ENST00000476215 TPD52P55327 224 aaPredicted RBP4.62□□□□□ -1.67
PTCD3-211ENST00000476215 DMP1Q13316 513 aaPredicted RBP4.62□□□□□ -1.67
PTCD3-211ENST00000476215 MDH1BQ5I0G3 518 aa4.62□□□□□ -1.67
PTCD3-211ENST00000476215 C9orf50Q5SZB4 431 aa4.62□□□□□ -1.67
PTCD3-211ENST00000476215 CCNYL2Q5T2Q4 361 aa4.62□□□□□ -1.67
PTCD3-211ENST00000476215 TMPRSS11FQ6ZWK6 438 aa4.62□□□□□ -1.67
PTCD3-211ENST00000476215 TRMT1LQ7Z2T5 733 aaKnown RBP4.62□□□□□ -1.67
PTCD3-211ENST00000476215 ZBTB8BQ8NAP8 495 aaPredicted RBP4.62□□□□□ -1.67
PTCD3-211ENST00000476215 CCDC191Q8NCU4 936 aa4.62□□□□□ -1.67
PTCD3-211ENST00000476215 PPFIBP2Q8ND30 876 aa4.62□□□□□ -1.67
PTCD3-211ENST00000476215 OR5M8Q8NGP6 311 aa4.62□□□□□ -1.67
PTCD3-211ENST00000476215 UHRF2Q96PU4 802 aa4.62□□□□□ -1.67
PTCD3-211ENST00000476215 PSD2Q9BQI7 771 aa4.62□□□□□ -1.67
PTCD3-211ENST00000476215 LMF2Q9BU23 707 aaKnown RBP4.62□□□□□ -1.67
PTCD3-211ENST00000476215 TRAF4Q9BUZ4 470 aaPredicted RBP4.62□□□□□ -1.67
PTCD3-211ENST00000476215 ZBTB20Q9HC78 741 aaPredicted RBP4.62□□□□□ -1.67
PTCD3-211ENST00000476215 ZNF334Q9HCZ1 680 aaPredicted RBP4.62□□□□□ -1.67
PTCD3-211ENST00000476215 DPP3Q9NY33 737 aa4.62□□□□□ -1.67
PTCD3-211ENST00000476215 BCCIPQ9P287 314 aaKnown RBP eCLIP4.62□□□□□ -1.67
PTCD3-211ENST00000476215 STK26Q9P289 416 aa4.62□□□□□ -1.67
PTCD3-211ENST00000476215 NRBP1Q9UHY1 535 aa4.62□□□□□ -1.67
PTCD3-211ENST00000476215 ZHX1Q9UKY1 873 aaPredicted RBP4.62□□□□□ -1.67
PTCD3-211ENST00000476215 UBE2CO00762 179 aa4.61□□□□□ -1.67
PTCD3-211ENST00000476215 MEIS2O14770 477 aa4.61□□□□□ -1.67
PTCD3-211ENST00000476215 TADA2AO75478 443 aa4.61□□□□□ -1.67
PTCD3-211ENST00000476215 SLC22A3O75751 556 aa4.61□□□□□ -1.67
PTCD3-211ENST00000476215 TOMM70O94826 608 aa4.61□□□□□ -1.67
PTCD3-211ENST00000476215 CENPBP07199 599 aaPredicted RBP4.61□□□□□ -1.67
PTCD3-211ENST00000476215 MYBL1P10243 752 aa4.61□□□□□ -1.67
PTCD3-211ENST00000476215 GNAZP19086 355 aa4.61□□□□□ -1.67
PTCD3-211ENST00000476215 CPT2P23786 658 aa4.61□□□□□ -1.67
PTCD3-211ENST00000476215 SLC9A3P48764 834 aa4.61□□□□□ -1.67
PTCD3-211ENST00000476215 NR2C2P49116 596 aa4.61□□□□□ -1.67
PTCD3-211ENST00000476215 ZNF75DP51815 510 aa4.61□□□□□ -1.67
PTCD3-211ENST00000476215 HYAL1Q12794 435 aa4.61□□□□□ -1.67
PTCD3-211ENST00000476215 HSPB3Q12988 150 aa4.61□□□□□ -1.67
PTCD3-211ENST00000476215 RPUSD3Q6P087 351 aaKnown RBP4.61□□□□□ -1.67
PTCD3-211ENST00000476215 CUZD1Q86UP6 607 aa4.61□□□□□ -1.67
PTCD3-211ENST00000476215 COMMD2Q86X83 199 aa4.61□□□□□ -1.67
PTCD3-211ENST00000476215 CEP57L1Q8IYX8 460 aa4.61□□□□□ -1.67
PTCD3-211ENST00000476215 CPSF7Q8N684 471 aaKnown RBP4.61□□□□□ -1.67
PTCD3-211ENST00000476215 OR2T12Q8NG77 320 aa4.61□□□□□ -1.67
PTCD3-211ENST00000476215 RNF128Q8TEB7 428 aa4.61□□□□□ -1.67
PTCD3-211ENST00000476215 SPDL1Q96EA4 605 aa4.61□□□□□ -1.67
PTCD3-211ENST00000476215 WNT5BQ9H1J7 359 aa4.61□□□□□ -1.67
PTCD3-211ENST00000476215 BICC1Q9H694 974 aaKnown RBP4.61□□□□□ -1.67
PTCD3-211ENST00000476215 PELI2Q9HAT8 420 aa4.61□□□□□ -1.67
PTCD3-211ENST00000476215 IL17BQ9UHF5 180 aa4.61□□□□□ -1.67
PTCD3-211ENST00000476215 SLC24A2Q9UI40 661 aa4.61□□□□□ -1.67
PTCD3-211ENST00000476215 SMCHD1A6NHR9 2005 aa4.61□□□□□ -1.67
PTCD3-211ENST00000476215 NCAPD3P42695 1498 aa4.61□□□□□ -1.67
PTCD3-211ENST00000476215 EDDM13A0A1B0GTR0 161 aa4.6□□□□□ -1.67
PTCD3-211ENST00000476215 A0A1W2PRB8 838 aa4.6□□□□□ -1.67
PTCD3-211ENST00000476215 OR6C76A6NM76 312 aa4.6□□□□□ -1.67
PTCD3-211ENST00000476215 PRR32B1ATL7 298 aa4.6□□□□□ -1.67
PTCD3-211ENST00000476215 CAVIN2O95810 425 aa4.6□□□□□ -1.67
PTCD3-211ENST00000476215 PRSS1P07477 247 aa4.6□□□□□ -1.67
PTCD3-211ENST00000476215 LINGO3P0C6S8 592 aa4.6□□□□□ -1.67
PTCD3-211ENST00000476215 MC5RP33032 325 aa4.6□□□□□ -1.67
PTCD3-211ENST00000476215 PPP5CP53041 499 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms