RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 HM13Q8TCT9 377 aa6.82□□□□□ -1.32
HDAC3-207ENST00000475549 ADAMTS17Q8TE56 1095 aa6.82□□□□□ -1.32
HDAC3-207ENST00000475549 MIB2Q96AX9 1013 aa6.82□□□□□ -1.32
HDAC3-207ENST00000475549 ULK4Q96C45 1275 aa6.82□□□□□ -1.32
HDAC3-207ENST00000475549 DCUN1D1Q96GG9 259 aa6.82□□□□□ -1.32
HDAC3-207ENST00000475549 CDKN2AIPNLQ96HQ2 116 aa6.82□□□□□ -1.32
HDAC3-207ENST00000475549 MRFAP1L1Q96HT8 127 aa6.82□□□□□ -1.32
HDAC3-207ENST00000475549 FERD3LQ96RJ6 166 aa6.82□□□□□ -1.32
HDAC3-207ENST00000475549 CD180Q99467 661 aa6.82□□□□□ -1.32
HDAC3-207ENST00000475549 COPS8Q99627 209 aa6.82□□□□□ -1.32
HDAC3-207ENST00000475549 C19orf43Q9BQ61 176 aa6.82□□□□□ -1.32
HDAC3-207ENST00000475549 CCM2Q9BSQ5 444 aa6.82□□□□□ -1.32
HDAC3-207ENST00000475549 TMEM121Q9BTD3 319 aa6.82□□□□□ -1.32
HDAC3-207ENST00000475549 TLR10Q9BXR5 811 aa6.82□□□□□ -1.32
HDAC3-207ENST00000475549 GPR87Q9BY21 358 aa6.82□□□□□ -1.32
HDAC3-207ENST00000475549 PITPNM3Q9BZ71 974 aa6.82□□□□□ -1.32
HDAC3-207ENST00000475549 KLHL25Q9H0H3 589 aa6.82□□□□□ -1.32
HDAC3-207ENST00000475549 CHST8Q9H2A9 424 aa6.82□□□□□ -1.32
HDAC3-207ENST00000475549 SRMSQ9H3Y6 488 aa6.82□□□□□ -1.32
HDAC3-207ENST00000475549 TFB2MQ9H5Q4 396 aaKnown RBP6.82□□□□□ -1.32
HDAC3-207ENST00000475549 XKR8Q9H6D3 395 aa6.82□□□□□ -1.32
HDAC3-207ENST00000475549 COG4Q9H9E3 785 aa6.82□□□□□ -1.32
HDAC3-207ENST00000475549 FAM60AQ9NP50 221 aa6.82□□□□□ -1.32
HDAC3-207ENST00000475549 MLXIPLQ9NP71 852 aa6.82□□□□□ -1.32
HDAC3-207ENST00000475549 NLE1Q9NVX2 485 aaPredicted RBP6.82□□□□□ -1.32
HDAC3-207ENST00000475549 ZDHHC3Q9NYG2 299 aa6.82□□□□□ -1.32
HDAC3-207ENST00000475549 CRLS1Q9UJA2 301 aa6.82□□□□□ -1.32
HDAC3-207ENST00000475549 POMT2Q9UKY4 750 aa6.82□□□□□ -1.32
HDAC3-207ENST00000475549 POLHQ9Y253 713 aa6.82□□□□□ -1.32
HDAC3-207ENST00000475549 COLEC10Q9Y6Z7 277 aa6.82□□□□□ -1.32
HDAC3-207ENST00000475549 UTP20O75691 2785 aaKnown RBP6.82□□□□□ -1.32
HDAC3-207ENST00000475549 CCDC78A2IDD5 438 aa6.81□□□□□ -1.32
HDAC3-207ENST00000475549 KLHL33A6NCF5 533 aa6.81□□□□□ -1.32
HDAC3-207ENST00000475549 OR51F1A6NGY5 319 aa6.81□□□□□ -1.32
HDAC3-207ENST00000475549 OR1I1O60431 355 aa6.81□□□□□ -1.32
HDAC3-207ENST00000475549 CPNE3O75131 537 aaKnown RBP6.81□□□□□ -1.32
HDAC3-207ENST00000475549 FTCDO95954 541 aa6.81□□□□□ -1.32
HDAC3-207ENST00000475549 SLC35G4P0C7Q5 338 aa6.81□□□□□ -1.32
HDAC3-207ENST00000475549 ITGALP20701 1170 aa6.81□□□□□ -1.32
HDAC3-207ENST00000475549 ACADLP28330 430 aa6.81□□□□□ -1.32
HDAC3-207ENST00000475549 GABRA4P48169 554 aa6.81□□□□□ -1.32
HDAC3-207ENST00000475549 CD151P48509 253 aa6.81□□□□□ -1.32
HDAC3-207ENST00000475549 CD97P48960 835 aa6.81□□□□□ -1.32
HDAC3-207ENST00000475549 ARL4DP49703 201 aa6.81□□□□□ -1.32
HDAC3-207ENST00000475549 VAV2P52735 878 aa6.81□□□□□ -1.32
HDAC3-207ENST00000475549 ITGA1P56199 1179 aa6.81□□□□□ -1.32
HDAC3-207ENST00000475549 PDE1BQ01064 536 aa6.81□□□□□ -1.32
HDAC3-207ENST00000475549 KLRB1Q12918 225 aa6.81□□□□□ -1.32
HDAC3-207ENST00000475549 CHAF1BQ13112 559 aa6.81□□□□□ -1.32
HDAC3-207ENST00000475549 PRKG2Q13237 762 aa6.81□□□□□ -1.32
HDAC3-207ENST00000475549 BOP1Q14137 746 aaKnown RBP6.81□□□□□ -1.32
HDAC3-207ENST00000475549 SEPT6Q14141 434 aa6.81□□□□□ -1.32
HDAC3-207ENST00000475549 UBAP2LQ14157 1087 aaKnown RBP6.81□□□□□ -1.32
HDAC3-207ENST00000475549 POU6F1Q14863 301 aa6.81□□□□□ -1.32
HDAC3-207ENST00000475549 UGT8Q16880 541 aa6.81□□□□□ -1.32
HDAC3-207ENST00000475549 KCTD19Q17RG1 926 aaPredicted RBP6.81□□□□□ -1.32
HDAC3-207ENST00000475549 GPR33Q49SQ1 333 aa6.81□□□□□ -1.32
HDAC3-207ENST00000475549 NADK2Q4G0N4 442 aa6.81□□□□□ -1.32
HDAC3-207ENST00000475549 CCDC38Q502W7 563 aa6.81□□□□□ -1.32
HDAC3-207ENST00000475549 ZRANB3Q5FWF4 1079 aa6.81□□□□□ -1.32
HDAC3-207ENST00000475549 IZUMO3Q5VZ72 239 aa6.81□□□□□ -1.32
HDAC3-207ENST00000475549 ZNF385CQ66K41 422 aaPredicted RBP6.81□□□□□ -1.32
HDAC3-207ENST00000475549 UNC5AQ6ZN44 842 aa6.81□□□□□ -1.32
HDAC3-207ENST00000475549 CDHR3Q6ZTQ4 885 aa6.81□□□□□ -1.32
HDAC3-207ENST00000475549 TAS2R42Q7RTR8 314 aa6.81□□□□□ -1.32
HDAC3-207ENST00000475549 SYVN1Q86TM6 617 aa6.81□□□□□ -1.32
HDAC3-207ENST00000475549 PRUNE1Q86TP1 453 aa6.81□□□□□ -1.32
HDAC3-207ENST00000475549 AMIGO1Q86WK6 493 aa6.81□□□□□ -1.32
HDAC3-207ENST00000475549 TMEM126BQ8IUX1 230 aa6.81□□□□□ -1.32
HDAC3-207ENST00000475549 DSELQ8IZU8 1212 aa6.81□□□□□ -1.32
HDAC3-207ENST00000475549 CARFQ8N187 725 aa6.81□□□□□ -1.32
HDAC3-207ENST00000475549 OR13J1Q8NGT2 312 aa6.81□□□□□ -1.32
HDAC3-207ENST00000475549 HEXDCQ8WVB3 486 aa6.81□□□□□ -1.32
HDAC3-207ENST00000475549 LCN9Q8WX39 176 aa6.81□□□□□ -1.32
HDAC3-207ENST00000475549 ATG4AQ8WYN0 398 aa6.81□□□□□ -1.32
HDAC3-207ENST00000475549 MR1Q95460 341 aa6.81□□□□□ -1.32
HDAC3-207ENST00000475549 HES6Q96HZ4 224 aa6.81□□□□□ -1.32
HDAC3-207ENST00000475549 CALR3Q96L12 384 aaKnown RBP6.81□□□□□ -1.32
HDAC3-207ENST00000475549 ZNF778Q96MU6 729 aa6.81□□□□□ -1.32
HDAC3-207ENST00000475549 LRFN5Q96NI6 719 aa6.81□□□□□ -1.32
HDAC3-207ENST00000475549 TRAPPC9Q96Q05 1148 aa6.81□□□□□ -1.32
HDAC3-207ENST00000475549 ANP32EQ9BTT0 268 aa6.81□□□□□ -1.32
HDAC3-207ENST00000475549 ING2Q9H160 280 aa6.81□□□□□ -1.32
HDAC3-207ENST00000475549 C1GALT1Q9NS00 363 aa6.81□□□□□ -1.32
HDAC3-207ENST00000475549 PCMTD2Q9NV79 361 aa6.81□□□□□ -1.32
HDAC3-207ENST00000475549 SPHK1Q9NYA1 384 aa6.81□□□□□ -1.32
HDAC3-207ENST00000475549 SLC2A6Q9UGQ3 507 aa6.81□□□□□ -1.32
HDAC3-207ENST00000475549 FEZ2Q9UHY8 353 aaPredicted RBP6.81□□□□□ -1.32
HDAC3-207ENST00000475549 ICKQ9UPZ9 632 aa6.81□□□□□ -1.32
HDAC3-207ENST00000475549 FARSAQ9Y285 508 aaKnown RBP6.81□□□□□ -1.32
HDAC3-207ENST00000475549 LRRK2Q5S007 2527 aa6.81□□□□□ -1.32
HDAC3-207ENST00000475549 ZFC3H1O60293 1989 aaKnown RBP6.8□□□□□ -1.32
HDAC3-207ENST00000475549 SLC5A10A0PJK1 596 aa6.8□□□□□ -1.32
HDAC3-207ENST00000475549 CCDC162PA2VCL2 907 aa6.8□□□□□ -1.32
HDAC3-207ENST00000475549 GSAPA4D1B5 854 aa6.8□□□□□ -1.32
HDAC3-207ENST00000475549 ARGFXA6NJG6 315 aa6.8□□□□□ -1.32
HDAC3-207ENST00000475549 TMEM150CB9EJG8 249 aa6.8□□□□□ -1.32
HDAC3-207ENST00000475549 MKRN2OSH3BPM6 223 aa6.8□□□□□ -1.32
HDAC3-207ENST00000475549 RFPL1O75677 317 aa6.8□□□□□ -1.32
HDAC3-207ENST00000475549 KLF7O75840 302 aaPredicted RBP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms