RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 LIMK2P53671 638 aa10.81□□□□□ -0.68
VAPB-204ENST00000475243 VLDLRP98155 873 aa10.81□□□□□ -0.68
VAPB-204ENST00000475243 HGSNATQ68CP4 663 aa10.81□□□□□ -0.68
VAPB-204ENST00000475243 ZNF366Q8N895 744 aa10.81□□□□□ -0.68
VAPB-204ENST00000475243 SLAIN1Q8ND83 568 aa10.81□□□□□ -0.68
VAPB-204ENST00000475243 BRSK1Q8TDC3 778 aa10.81□□□□□ -0.68
VAPB-204ENST00000475243 CCNB1IP1Q9NPC3 277 aa10.81□□□□□ -0.68
VAPB-204ENST00000475243 LTN1O94822 1766 aa10.81□□□□□ -0.68
VAPB-204ENST00000475243 IRGMA1A4Y4 181 aa10.8□□□□□ -0.68
VAPB-204ENST00000475243 SYN3O14994 580 aa10.8□□□□□ -0.68
VAPB-204ENST00000475243 RPS24P62847 133 aaKnown RBP10.8□□□□□ -0.68
VAPB-204ENST00000475243 TXNL4AP83876 142 aaKnown RBP10.8□□□□□ -0.68
VAPB-204ENST00000475243 FUT2Q10981 343 aa10.8□□□□□ -0.68
VAPB-204ENST00000475243 PPIGQ13427 754 aaKnown RBP eCLIP10.8□□□□□ -0.682e-6■■□□□ 12
VAPB-204ENST00000475243 AAGABQ6PD74 315 aa10.8□□□□□ -0.68
VAPB-204ENST00000475243 ENPP7Q6UWV6 458 aa10.8□□□□□ -0.68
VAPB-204ENST00000475243 ZNF280BQ86YH2 543 aa10.8□□□□□ -0.68
VAPB-204ENST00000475243 TMEM192Q8IY95 271 aa10.8□□□□□ -0.68
VAPB-204ENST00000475243 KREMEN2Q8NCW0 462 aa10.8□□□□□ -0.68
VAPB-204ENST00000475243 SRFBP1Q8NEF9 429 aaKnown RBP10.8□□□□□ -0.68
VAPB-204ENST00000475243 OSBPL2Q9H1P3 480 aa10.8□□□□□ -0.68
VAPB-204ENST00000475243 OR2AG1Q9H205 316 aa10.8□□□□□ -0.68
VAPB-204ENST00000475243 THRBP10828 461 aa10.8□□□□□ -0.68
VAPB-204ENST00000475243 UGT1A6P19224 532 aa10.8□□□□□ -0.68
VAPB-204ENST00000475243 UGT1A1P22309 533 aa10.8□□□□□ -0.68
VAPB-204ENST00000475243 UGT1A4P22310 534 aa10.8□□□□□ -0.68
VAPB-204ENST00000475243 UGT1A3P35503 534 aa10.8□□□□□ -0.68
VAPB-204ENST00000475243 BCAP31P51572 246 aa10.8□□□□□ -0.68
VAPB-204ENST00000475243 NDST2P52849 883 aa10.8□□□□□ -0.68
VAPB-204ENST00000475243 SP140Q13342 867 aa10.8□□□□□ -0.68
VAPB-204ENST00000475243 CCL14Q16627 93 aa10.8□□□□□ -0.68
VAPB-204ENST00000475243 ADGRD1Q6QNK2 874 aa10.8□□□□□ -0.68
VAPB-204ENST00000475243 OR6K6Q8NGW6 343 aa10.8□□□□□ -0.68
VAPB-204ENST00000475243 GPR151Q8TDV0 419 aa10.8□□□□□ -0.68
VAPB-204ENST00000475243 CHST10O43529 356 aa10.8□□□□□ -0.68
VAPB-204ENST00000475243 LYPLA2O95372 231 aa10.8□□□□□ -0.68
VAPB-204ENST00000475243 GPD2P43304 727 aa10.8□□□□□ -0.68
VAPB-204ENST00000475243 GANABQ14697 944 aaKnown RBP10.8□□□□□ -0.68
VAPB-204ENST00000475243 TLR1Q15399 786 aa10.8□□□□□ -0.68
VAPB-204ENST00000475243 CRY2Q49AN0 593 aa10.8□□□□□ -0.68
VAPB-204ENST00000475243 ECHDC2Q86YB7 292 aa10.8□□□□□ -0.68
VAPB-204ENST00000475243 CBR4Q8N4T8 237 aa10.8□□□□□ -0.68
VAPB-204ENST00000475243 OR2L3Q8NG85 312 aa10.8□□□□□ -0.68
VAPB-204ENST00000475243 HMGB4Q8WW32 186 aa10.8□□□□□ -0.68
VAPB-204ENST00000475243 DNAJC28Q9NX36 388 aa10.8□□□□□ -0.68
VAPB-204ENST00000475243 MAGEB17A8MXT2 336 aa10.8□□□□□ -0.68
VAPB-204ENST00000475243 LCP2Q13094 533 aa10.8□□□□□ -0.68
VAPB-204ENST00000475243 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.8□□□□□ -0.68
VAPB-204ENST00000475243 MPP5Q8N3R9 675 aa10.8□□□□□ -0.68
VAPB-204ENST00000475243 FSTL5Q8N475 847 aaPredicted RBP10.8□□□□□ -0.68
VAPB-204ENST00000475243 DEFB119Q8N690 84 aa10.8□□□□□ -0.68
VAPB-204ENST00000475243 DNAAF2Q9NVR5 837 aaKnown RBP10.8□□□□□ -0.68
VAPB-204ENST00000475243 ADGRB1O14514 1584 aa10.8□□□□□ -0.68
VAPB-204ENST00000475243 A0A0X1KG70 313 aa10.8□□□□□ -0.68
VAPB-204ENST00000475243 MTX2O75431 263 aa10.8□□□□□ -0.68
VAPB-204ENST00000475243 SYN1P17600 705 aa10.8□□□□□ -0.68
VAPB-204ENST00000475243 AZGP1P25311 298 aaKnown RBP10.8□□□□□ -0.68
VAPB-204ENST00000475243 CLCN7P51798 805 aa10.8□□□□□ -0.68
VAPB-204ENST00000475243 RALGPS1Q5JS13 557 aa10.8□□□□□ -0.68
VAPB-204ENST00000475243 CRELD2Q6UXH1 353 aaPredicted RBP10.8□□□□□ -0.68
VAPB-204ENST00000475243 PRR23BQ6ZRT6 265 aa10.8□□□□□ -0.68
VAPB-204ENST00000475243 PIGXQ8TBF5 258 aa10.8□□□□□ -0.68
VAPB-204ENST00000475243 RIPOR3Q96MK2 946 aa10.8□□□□□ -0.68
VAPB-204ENST00000475243 DPYSL5Q9BPU6 564 aa10.8□□□□□ -0.68
VAPB-204ENST00000475243 DMTF1Q9Y222 760 aa10.8□□□□□ -0.68
VAPB-204ENST00000475243 WRBO00258 174 aa10.8□□□□□ -0.68
VAPB-204ENST00000475243 ACADLP28330 430 aa10.8□□□□□ -0.68
VAPB-204ENST00000475243 DAOAP59103 153 aa10.8□□□□□ -0.68
VAPB-204ENST00000475243 HYAL2Q12891 473 aa10.8□□□□□ -0.68
VAPB-204ENST00000475243 TRMT10BQ6PF06 316 aaKnown RBP10.8□□□□□ -0.68
VAPB-204ENST00000475243 AMZ2Q86W34 360 aa10.8□□□□□ -0.68
VAPB-204ENST00000475243 CLEC4DQ8WXI8 215 aa10.8□□□□□ -0.68
VAPB-204ENST00000475243 APOBEC3GQ9HC16 384 aaKnown RBP10.8□□□□□ -0.68
VAPB-204ENST00000475243 GKN1Q9NS71 199 aa10.8□□□□□ -0.68
VAPB-204ENST00000475243 A0A1W2PQ72 361 aa10.8□□□□□ -0.68
VAPB-204ENST00000475243 SLC30A4O14863 429 aa10.8□□□□□ -0.68
VAPB-204ENST00000475243 ZNF208O43345 1280 aa10.8□□□□□ -0.68
VAPB-204ENST00000475243 TPD52L2O43399 206 aaKnown RBP10.8□□□□□ -0.68
VAPB-204ENST00000475243 B3GALT2O43825 422 aa10.8□□□□□ -0.68
VAPB-204ENST00000475243 S100A9P06702 114 aaKnown RBP10.8□□□□□ -0.68
VAPB-204ENST00000475243 CHRNB2P17787 502 aa10.8□□□□□ -0.68
VAPB-204ENST00000475243 GDF10P55107 478 aa10.8□□□□□ -0.68
VAPB-204ENST00000475243 XKR4Q5GH76 650 aa10.8□□□□□ -0.68
VAPB-204ENST00000475243 ERICH5Q6P6B1 374 aa10.8□□□□□ -0.68
VAPB-204ENST00000475243 MMAAQ8IVH4 418 aaKnown RBP10.8□□□□□ -0.68
VAPB-204ENST00000475243 HNRNPABQ99729 332 aaKnown RBP10.8□□□□□ -0.68
VAPB-204ENST00000475243 TAPBPLQ9BX59 468 aa10.8□□□□□ -0.68
VAPB-204ENST00000475243 SDCBP2Q9H190 292 aa10.8□□□□□ -0.68
VAPB-204ENST00000475243 HMGXB4Q9UGU5 601 aa10.8□□□□□ -0.68
VAPB-204ENST00000475243 DHFRP00374 187 aa10.79□□□□□ -0.68
VAPB-204ENST00000475243 CFIP05156 583 aa10.79□□□□□ -0.68
VAPB-204ENST00000475243 JAM2P57087 298 aa10.79□□□□□ -0.68
VAPB-204ENST00000475243 IL10RBQ08334 325 aa10.79□□□□□ -0.68
VAPB-204ENST00000475243 TIGD5Q53EQ6 642 aa10.79□□□□□ -0.68
VAPB-204ENST00000475243 PLD4Q96BZ4 506 aa10.79□□□□□ -0.68
VAPB-204ENST00000475243 CITED4Q96RK1 184 aa10.79□□□□□ -0.68
VAPB-204ENST00000475243 FEM1AQ9BSK4 669 aa10.79□□□□□ -0.68
VAPB-204ENST00000475243 WDR12Q9GZL7 423 aaKnown RBP10.79□□□□□ -0.68
VAPB-204ENST00000475243 TRPV5Q9NQA5 729 aa10.79□□□□□ -0.68
VAPB-204ENST00000475243 C2CD4BA6NLJ0 364 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms