RNA–Protein interactions for RNA: ENST00000472880.1

COL9A3-210, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 959 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-210ENST00000472880 CD151P48509 253 aa19.19■□□□□ 0.66
COL9A3-210ENST00000472880 CDKN1CP49918 316 aaPredicted RBP19.19■□□□□ 0.66
COL9A3-210ENST00000472880 VAV2P52735 878 aa19.19■□□□□ 0.66
COL9A3-210ENST00000472880 ABRQ12979 859 aa19.19■□□□□ 0.66
COL9A3-210ENST00000472880 RPA4Q13156 261 aa19.19■□□□□ 0.66
COL9A3-210ENST00000472880 UBAP2LQ14157 1087 aaKnown RBP19.19■□□□□ 0.66
COL9A3-210ENST00000472880 PARP6Q2NL67 630 aa19.19■□□□□ 0.66
COL9A3-210ENST00000472880 IZUMO3Q5VZ72 239 aa19.19■□□□□ 0.66
COL9A3-210ENST00000472880 CPZQ66K79 652 aa19.19■□□□□ 0.66
COL9A3-210ENST00000472880 ATCAYQ86WG3 371 aa19.19■□□□□ 0.66
COL9A3-210ENST00000472880 UBL4BQ8N7F7 174 aa19.19■□□□□ 0.66
COL9A3-210ENST00000472880 LRRC57Q8N9N7 239 aa19.19■□□□□ 0.66
COL9A3-210ENST00000472880 CLIP3Q96DZ5 547 aa19.19■□□□□ 0.66
COL9A3-210ENST00000472880 HGH1Q9BTY7 390 aa19.19■□□□□ 0.66
COL9A3-210ENST00000472880 LACRTQ9GZZ8 138 aa19.19■□□□□ 0.66
COL9A3-210ENST00000472880 CHST8Q9H2A9 424 aa19.19■□□□□ 0.66
COL9A3-210ENST00000472880 MVB12BQ9H7P6 319 aa19.19■□□□□ 0.66
COL9A3-210ENST00000472880 NLE1Q9NVX2 485 aaPredicted RBP19.19■□□□□ 0.66
COL9A3-210ENST00000472880 TMEM150CB9EJG8 249 aa19.18■□□□□ 0.66
COL9A3-210ENST00000472880 H7C0S8 307 aa19.18■□□□□ 0.66
COL9A3-210ENST00000472880 BTN3A1O00481 513 aa19.18■□□□□ 0.66
COL9A3-210ENST00000472880 GSTM1P09488 218 aa19.18■□□□□ 0.66
COL9A3-210ENST00000472880 CYP2A7P20853 494 aa19.18■□□□□ 0.66
COL9A3-210ENST00000472880 PRDX3P30048 256 aaKnown RBP19.18■□□□□ 0.66
COL9A3-210ENST00000472880 PGDP52209 483 aa19.18■□□□□ 0.66
COL9A3-210ENST00000472880 GSTM4Q03013 218 aa19.18■□□□□ 0.66
COL9A3-210ENST00000472880 CACNG1Q06432 222 aa19.18■□□□□ 0.66
COL9A3-210ENST00000472880 CHAF1BQ13112 559 aa19.18■□□□□ 0.66
COL9A3-210ENST00000472880 LAMB3Q13751 1172 aa19.18■□□□□ 0.66
COL9A3-210ENST00000472880 POU6F1Q14863 301 aa19.18■□□□□ 0.66
COL9A3-210ENST00000472880 P3H1Q32P28 736 aa19.18■□□□□ 0.66
COL9A3-210ENST00000472880 KCTD11Q693B1 232 aa19.18■□□□□ 0.66
COL9A3-210ENST00000472880 ZNF517Q6ZMY9 492 aaPredicted RBP19.18■□□□□ 0.66
COL9A3-210ENST00000472880 PEX26Q7Z412 305 aa19.18■□□□□ 0.66
COL9A3-210ENST00000472880 KIAA1328Q86T90 577 aa19.18■□□□□ 0.66
COL9A3-210ENST00000472880 DSELQ8IZU8 1212 aa19.18■□□□□ 0.66
COL9A3-210ENST00000472880 FAM71DQ8N9W8 422 aa19.18■□□□□ 0.66
COL9A3-210ENST00000472880 SLC38A9Q8NBW4 561 aa19.18■□□□□ 0.66
COL9A3-210ENST00000472880 ACRBPQ8NEB7 543 aa19.18■□□□□ 0.66
COL9A3-210ENST00000472880 OR52E1Q8NGJ3 308 aa19.18■□□□□ 0.66
COL9A3-210ENST00000472880 MIB2Q96AX9 1013 aa19.18■□□□□ 0.66
COL9A3-210ENST00000472880 ALS2CR12Q96Q35 445 aa19.18■□□□□ 0.66
COL9A3-210ENST00000472880 SLC7A5P2Q9GIP4 190 aa19.18■□□□□ 0.66
COL9A3-210ENST00000472880 TFB2MQ9H5Q4 396 aaKnown RBP19.18■□□□□ 0.66
COL9A3-210ENST00000472880 ACSS2Q9NR19 701 aa19.18■□□□□ 0.66
COL9A3-210ENST00000472880 ANKMY1Q9P2S6 941 aa19.18■□□□□ 0.66
COL9A3-210ENST00000472880 AMFRQ9UKV5 643 aa19.18■□□□□ 0.66
COL9A3-210ENST00000472880 SNX7Q9UNH6 387 aa19.18■□□□□ 0.66
COL9A3-210ENST00000472880 ARGFXA6NJG6 315 aa19.17■□□□□ 0.66
COL9A3-210ENST00000472880 C2orf74A8MZ97 194 aa19.17■□□□□ 0.66
COL9A3-210ENST00000472880 MEN1O00255 615 aa19.17■□□□□ 0.66
COL9A3-210ENST00000472880 BTN3A3O00478 584 aa19.17■□□□□ 0.66
COL9A3-210ENST00000472880 PDGFAP04085 211 aa19.17■□□□□ 0.66
COL9A3-210ENST00000472880 RAB40ALP0C0E4 278 aa19.17■□□□□ 0.66
COL9A3-210ENST00000472880 PRSS56P0CW18 603 aa19.17■□□□□ 0.66
COL9A3-210ENST00000472880 ST6GAL1P15907 406 aa19.17■□□□□ 0.66
COL9A3-210ENST00000472880 TPH1P17752 444 aa19.17■□□□□ 0.66
COL9A3-210ENST00000472880 PDHA2P29803 388 aa19.17■□□□□ 0.66
COL9A3-210ENST00000472880 LMAN1P49257 510 aa19.17■□□□□ 0.66
COL9A3-210ENST00000472880 ZNF658BQ4V348 819 aaPredicted RBP19.17■□□□□ 0.66
COL9A3-210ENST00000472880 PLEKHS1Q5SXH7 462 aa19.17■□□□□ 0.66
COL9A3-210ENST00000472880 PRAMEF17Q5VTA0 474 aa19.17■□□□□ 0.66
COL9A3-210ENST00000472880 RAD9BQ6WBX8 426 aa19.17■□□□□ 0.66
COL9A3-210ENST00000472880 MICALCLQ6ZW33 695 aa19.17■□□□□ 0.66
COL9A3-210ENST00000472880 AMIGO1Q86WK6 493 aa19.17■□□□□ 0.66
COL9A3-210ENST00000472880 CLDN19Q8N6F1 224 aa19.17■□□□□ 0.66
COL9A3-210ENST00000472880 ENDOVQ8N8Q3 282 aaKnown RBP19.17■□□□□ 0.66
COL9A3-210ENST00000472880 PHC3Q8NDX5 983 aa19.17■□□□□ 0.66
COL9A3-210ENST00000472880 OR1L3Q8NH93 324 aa19.17■□□□□ 0.66
COL9A3-210ENST00000472880 STYXQ8WUJ0 223 aa19.17■□□□□ 0.66
COL9A3-210ENST00000472880 TFGQ92734 400 aaPredicted RBP19.17■□□□□ 0.66
COL9A3-210ENST00000472880 SLC25A23Q9BV35 468 aa19.17■□□□□ 0.66
COL9A3-210ENST00000472880 PITPNM3Q9BZ71 974 aa19.17■□□□□ 0.66
COL9A3-210ENST00000472880 ACTR5Q9H9F9 607 aaPredicted RBP19.17■□□□□ 0.66
COL9A3-210ENST00000472880 PTPN13Q12923 2485 aa19.17■□□□□ 0.66
COL9A3-210ENST00000472880 MIF4GDA9UHW6 222 aaKnown RBP19.16■□□□□ 0.66
COL9A3-210ENST00000472880 AP2A2O94973 939 aa19.16■□□□□ 0.66
COL9A3-210ENST00000472880 METTL18O95568 372 aa19.16■□□□□ 0.66
COL9A3-210ENST00000472880 MSL3P1P0C860 447 aa19.16■□□□□ 0.66
COL9A3-210ENST00000472880 PTGIRP43119 386 aa19.16■□□□□ 0.66
COL9A3-210ENST00000472880 MLLT10P55197 1068 aa19.16■□□□□ 0.66
COL9A3-210ENST00000472880 PRKG2Q13237 762 aa19.16■□□□□ 0.66
COL9A3-210ENST00000472880 BOP1Q14137 746 aaKnown RBP19.16■□□□□ 0.66
COL9A3-210ENST00000472880 DBN1Q16643 649 aa19.16■□□□□ 0.66
COL9A3-210ENST00000472880 HOOK3Q86VS8 718 aa19.16■□□□□ 0.66
COL9A3-210ENST00000472880 SYTL1Q8IYJ3 562 aa19.16■□□□□ 0.66
COL9A3-210ENST00000472880 SYCE1Q8N0S2 351 aa19.16■□□□□ 0.66
COL9A3-210ENST00000472880 CDKN2AIPNLQ96HQ2 116 aa19.16■□□□□ 0.66
COL9A3-210ENST00000472880 NLNQ9BYT8 704 aa19.16■□□□□ 0.66
COL9A3-210ENST00000472880 KLHL25Q9H0H3 589 aa19.16■□□□□ 0.66
COL9A3-210ENST00000472880 ING2Q9H160 280 aa19.16■□□□□ 0.66
COL9A3-210ENST00000472880 XKR8Q9H6D3 395 aa19.16■□□□□ 0.66
COL9A3-210ENST00000472880 PIH1D1Q9NWS0 290 aaKnown RBP19.16■□□□□ 0.66
COL9A3-210ENST00000472880 ACTR10Q9NZ32 417 aa19.16■□□□□ 0.66
COL9A3-210ENST00000472880 SMARCAL1Q9NZC9 954 aa19.16■□□□□ 0.66
COL9A3-210ENST00000472880 SERTAD3Q9UJW9 196 aa19.16■□□□□ 0.66
COL9A3-210ENST00000472880 PCDHGA9Q9Y5G4 932 aaKnown RBP19.16■□□□□ 0.66
COL9A3-210ENST00000472880 QSOX1O00391 747 aa19.15■□□□□ 0.66
COL9A3-210ENST00000472880 LIN7AO14910 233 aaPredicted RBP19.15■□□□□ 0.66
COL9A3-210ENST00000472880 PSMD3O43242 534 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms