RNA–Protein interactions for RNA: ENST00000472034.5

LMNB1-205, Transcript of lamin B1, humanhuman

TSL 3

Gene LMNB1, Length 730 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-205ENST00000472034 SERPINC1P01008 464 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 IL1BP01584 269 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 ALOX5P09917 674 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 HSD3B1P14060 373 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 HPGDP15428 266 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 NAGAP17050 411 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 VCLP18206 1134 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 PDCP20941 246 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 CFL1P23528 166 aaKnown RBP4.35□□□□□ -1.71
LMNB1-205ENST00000472034 PCSK1P29120 753 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 CORO1AP31146 461 aaKnown RBP4.35□□□□□ -1.71
LMNB1-205ENST00000472034 GRK3P35626 688 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 CETN2P41208 172 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 MTIF2P46199 727 aaKnown RBP4.35□□□□□ -1.71
LMNB1-205ENST00000472034 ACOT2P49753 483 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 TUBP50607 506 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 CCL11P51671 97 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 SGSHP51688 502 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 SLC5A3P53794 718 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 PER3P56645 1201 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 UBE2IP63279 158 aaKnown RBP4.35□□□□□ -1.71
LMNB1-205ENST00000472034 COG7P83436 770 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 GUCY1A3Q02108 690 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 ACY1Q03154 408 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 CETN1Q12798 172 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 CNTN1Q12860 1018 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 PAK1Q13153 545 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 SCARB2Q14108 478 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 GNA13Q14344 377 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 NTRK3Q16288 839 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 SGSM1Q2NKQ1 1148 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 ZNF284Q2VY69 593 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 HNRNPA1L2Q32P51 320 aaKnown RBP4.35□□□□□ -1.71
LMNB1-205ENST00000472034 VWA3BQ502W6 1294 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 KRTCAP3Q53RY4 240 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 TDRD12Q587J7 1177 aaKnown RBP4.35□□□□□ -1.71
LMNB1-205ENST00000472034 VWA2Q5GFL6 755 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 AGBL4Q5VU57 503 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 STEAP3Q658P3 488 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 ANKS6Q68DC2 871 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 HIST2H2BDQ6DRA6 164 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 SLC39A4Q6P5W5 647 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 SARM1Q6SZW1 724 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 CRELD2Q6UXH1 353 aaPredicted RBP4.35□□□□□ -1.71
LMNB1-205ENST00000472034 CLEC9AQ6UXN8 241 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 ZNF704Q6ZNC4 412 aaPredicted RBP4.35□□□□□ -1.71
LMNB1-205ENST00000472034 PHLDB2Q86SQ0 1253 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 TBC1D1Q86TI0 1168 aaPredicted RBP4.35□□□□□ -1.71
LMNB1-205ENST00000472034 BIVMQ86UB2 503 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 TRIM69Q86WT6 500 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 SFR1Q86XK3 245 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 TRIM48Q8IWZ4 208 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 RHOT2Q8IXI1 618 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 NLGN4XQ8N0W4 816 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 CADM3Q8N126 398 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 SPC24Q8NBT2 197 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 TMEM161BQ8NDZ6 487 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 NLGN4YQ8NFZ3 816 aaPredicted RBP4.35□□□□□ -1.71
LMNB1-205ENST00000472034 PCDH19Q8TAB3 1148 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 PHOSPHO1Q8TCT1 267 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 SLC26A7Q8TE54 656 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 NOC3LQ8WTT2 800 aaKnown RBP4.35□□□□□ -1.71
LMNB1-205ENST00000472034 DDI1Q8WTU0 396 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 KIAA1143Q96AT1 154 aaPredicted RBP4.35□□□□□ -1.71
LMNB1-205ENST00000472034 EXOC2Q96KP1 924 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 MAGEB10Q96LZ2 347 aaPredicted RBP4.35□□□□□ -1.71
LMNB1-205ENST00000472034 HS6ST2Q96MM7 605 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 TAAR9Q96RI9 348 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 MNTQ99583 582 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 TSG101Q99816 390 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 CTRCQ99895 268 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 NUDT22Q9BRQ3 303 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 GPATCH1Q9BRR8 931 aaKnown RBP4.35□□□□□ -1.71
LMNB1-205ENST00000472034 TBCDQ9BTW9 1192 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 CCDC28BQ9BUN5 200 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 CCDC106Q9BWC9 280 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 B3GNT5Q9BYG0 378 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 SPRY4Q9C004 299 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 B3GNT4Q9C0J1 378 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 CXXC4Q9H2H0 198 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 DPEP3Q9H4B8 488 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 CNTD2Q9H8S5 307 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 FANCEQ9HB96 536 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 MLXIPLQ9NP71 852 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 DMAP1Q9NPF5 467 aaPredicted RBP4.35□□□□□ -1.71
LMNB1-205ENST00000472034 MRPL40Q9NQ50 206 aaKnown RBP4.35□□□□□ -1.71
LMNB1-205ENST00000472034 OCIAD1Q9NX40 245 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 GALNT8Q9NY28 637 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 EHD3Q9NZN3 535 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 EHD2Q9NZN4 543 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 ZNF624Q9P2J8 865 aaPredicted RBP4.35□□□□□ -1.71
LMNB1-205ENST00000472034 GIMAP2Q9UG22 337 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 SH3BGRL2Q9UJC5 107 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 CPSF3Q9UKF6 684 aaKnown RBP4.35□□□□□ -1.71
LMNB1-205ENST00000472034 AGO1Q9UL18 857 aaKnown RBP4.35□□□□□ -1.71
LMNB1-205ENST00000472034 AGAP1Q9UPQ3 857 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 NAALADL1Q9UQQ1 740 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 POLHQ9Y253 713 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 PCDHGA3Q9Y5H0 932 aa4.35□□□□□ -1.71
LMNB1-205ENST00000472034 KLF2Q9Y5W3 355 aaPredicted RBP4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms