RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 RTL3Q8N8U3 475 aaKnown RBP6.41□□□□□ -1.38
SMC5-202ENST00000471372 LPCAT1Q8NF37 534 aa6.41□□□□□ -1.38
SMC5-202ENST00000471372 OR5M8Q8NGP6 311 aa6.41□□□□□ -1.38
SMC5-202ENST00000471372 WFIKKN2Q8TEU8 576 aa6.41□□□□□ -1.38
SMC5-202ENST00000471372 DNAAF4Q8WXU2 420 aa6.41□□□□□ -1.38
SMC5-202ENST00000471372 SMPDL3BQ92485 455 aa6.41□□□□□ -1.38
SMC5-202ENST00000471372 SYN2Q92777 582 aaPredicted RBP6.41□□□□□ -1.38
SMC5-202ENST00000471372 BCL2L2Q92843 193 aaPredicted RBP6.41□□□□□ -1.38
SMC5-202ENST00000471372 MTERF1Q99551 399 aaKnown RBP6.41□□□□□ -1.38
SMC5-202ENST00000471372 SPXQ9BT56 116 aa6.41□□□□□ -1.38
SMC5-202ENST00000471372 OSBPL8Q9BZF1 889 aa6.41□□□□□ -1.38
SMC5-202ENST00000471372 Q9N2K0 584 aa6.41□□□□□ -1.38
SMC5-202ENST00000471372 KLHL1Q9NR64 748 aa6.41□□□□□ -1.38
SMC5-202ENST00000471372 P4HTMQ9NXG6 502 aa6.41□□□□□ -1.38
SMC5-202ENST00000471372 CYP39A1Q9NYL5 469 aa6.41□□□□□ -1.38
SMC5-202ENST00000471372 KLHL9Q9P2J3 617 aa6.41□□□□□ -1.38
SMC5-202ENST00000471372 TRPC4Q9UBN4 977 aa6.41□□□□□ -1.38
SMC5-202ENST00000471372 STX8Q9UNK0 236 aa6.41□□□□□ -1.38
SMC5-202ENST00000471372 GRIP1Q9Y3R0 1128 aa6.41□□□□□ -1.38
SMC5-202ENST00000471372 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.41□□□□□ -1.382e-6■□□□□ 8.8
SMC5-202ENST00000471372 SPAG9O60271 1321 aaKnown RBP6.41□□□□□ -1.38
SMC5-202ENST00000471372 ATXN2Q99700 1313 aaKnown RBP6.41□□□□□ -1.38
SMC5-202ENST00000471372 PRAG1Q86YV5 1406 aa6.41□□□□□ -1.38
SMC5-202ENST00000471372 CH25HO95992 272 aa6.4□□□□□ -1.38
SMC5-202ENST00000471372 GH1P01241 217 aa6.4□□□□□ -1.38
SMC5-202ENST00000471372 CYP1A2P05177 515 aa6.4□□□□□ -1.38
SMC5-202ENST00000471372 CSN3P07498 182 aa6.4□□□□□ -1.38
SMC5-202ENST00000471372 CTNNB1P35222 781 aa6.4□□□□□ -1.38
SMC5-202ENST00000471372 SLC9A3P48764 834 aa6.4□□□□□ -1.38
SMC5-202ENST00000471372 CLCNKAP51800 687 aa6.4□□□□□ -1.38
SMC5-202ENST00000471372 SGCBQ16585 318 aa6.4□□□□□ -1.38
SMC5-202ENST00000471372 IQCCQ4KMZ1 466 aa6.4□□□□□ -1.38
SMC5-202ENST00000471372 FAM109BQ6ICB4 259 aaPredicted RBP6.4□□□□□ -1.38
SMC5-202ENST00000471372 Q75L30 129 aa6.4□□□□□ -1.38
SMC5-202ENST00000471372 TRAPPC11Q7Z392 1133 aa6.4□□□□□ -1.38
SMC5-202ENST00000471372 DGLUCYQ7Z3D6 616 aa6.4□□□□□ -1.38
SMC5-202ENST00000471372 ZNF34Q8IZ26 560 aa6.4□□□□□ -1.38
SMC5-202ENST00000471372 OR52I2Q8NH67 350 aa6.4□□□□□ -1.38
SMC5-202ENST00000471372 LPAR1Q92633 364 aa6.4□□□□□ -1.38
SMC5-202ENST00000471372 PRSS22Q9GZN4 317 aa6.4□□□□□ -1.38
SMC5-202ENST00000471372 DNAJC4Q9NNZ3 241 aa6.4□□□□□ -1.38
SMC5-202ENST00000471372 PDRG1Q9NUG6 133 aa6.4□□□□□ -1.38
SMC5-202ENST00000471372 ANO10Q9NW15 660 aa6.4□□□□□ -1.38
SMC5-202ENST00000471372 TMCC3Q9ULS5 477 aa6.4□□□□□ -1.38
SMC5-202ENST00000471372 IGHV4-28A0A0C4DH34 117 aa6.39□□□□□ -1.39
SMC5-202ENST00000471372 NEMP2A6NFY4 417 aa6.39□□□□□ -1.39
SMC5-202ENST00000471372 MATN3O15232 486 aa6.39□□□□□ -1.39
SMC5-202ENST00000471372 TTI1O43156 1089 aa6.39□□□□□ -1.39
SMC5-202ENST00000471372 PPIP5K2O43314 1243 aa6.39□□□□□ -1.39
SMC5-202ENST00000471372 WISP2O76076 250 aa6.39□□□□□ -1.39
SMC5-202ENST00000471372 LCATP04180 440 aa6.39□□□□□ -1.39
SMC5-202ENST00000471372 SPP1P10451 314 aa6.39□□□□□ -1.39
SMC5-202ENST00000471372 TYMPP19971 482 aa6.39□□□□□ -1.39
SMC5-202ENST00000471372 CCND3P30281 292 aaPredicted RBP6.39□□□□□ -1.39
SMC5-202ENST00000471372 FRKP42685 505 aaPredicted RBP6.39□□□□□ -1.39
SMC5-202ENST00000471372 ENTPD1P49961 510 aa6.39□□□□□ -1.39
SMC5-202ENST00000471372 COL10A1Q03692 680 aa6.39□□□□□ -1.39
SMC5-202ENST00000471372 C10orf25Q5T742 122 aa6.39□□□□□ -1.39
SMC5-202ENST00000471372 FAM69BQ5VUD6 431 aa6.39□□□□□ -1.39
SMC5-202ENST00000471372 NOTUMQ6P988 496 aa6.39□□□□□ -1.39
SMC5-202ENST00000471372 CYB5D1Q6P9G0 228 aa6.39□□□□□ -1.39
SMC5-202ENST00000471372 PODNL1Q6PEZ8 512 aa6.39□□□□□ -1.39
SMC5-202ENST00000471372 ZNF517Q6ZMY9 492 aaPredicted RBP6.39□□□□□ -1.39
SMC5-202ENST00000471372 BTN2A1Q7KYR7 527 aa6.39□□□□□ -1.39
SMC5-202ENST00000471372 PTF1AQ7RTS3 328 aa6.39□□□□□ -1.39
SMC5-202ENST00000471372 GGNQ86UU5 652 aa6.39□□□□□ -1.39
SMC5-202ENST00000471372 ADGRG3Q86Y34 549 aa6.39□□□□□ -1.39
SMC5-202ENST00000471372 FOXP4Q8IVH2 680 aaPredicted RBP6.39□□□□□ -1.39
SMC5-202ENST00000471372 CCDC83Q8IWF9 413 aa6.39□□□□□ -1.39
SMC5-202ENST00000471372 Q8N1X5 172 aa6.39□□□□□ -1.39
SMC5-202ENST00000471372 TMEM199Q8N511 208 aa6.39□□□□□ -1.39
SMC5-202ENST00000471372 B4GALNT2Q8NHY0 566 aa6.39□□□□□ -1.39
SMC5-202ENST00000471372 CENPTQ96BT3 561 aa6.39□□□□□ -1.39
SMC5-202ENST00000471372 TXNDC15Q96J42 360 aa6.39□□□□□ -1.39
SMC5-202ENST00000471372 KLHL5Q96PQ7 755 aa6.39□□□□□ -1.39
SMC5-202ENST00000471372 CSF3RQ99062 836 aa6.39□□□□□ -1.39
SMC5-202ENST00000471372 LMF2Q9BU23 707 aaKnown RBP6.39□□□□□ -1.39
SMC5-202ENST00000471372 R3HDMLQ9H3Y0 253 aa6.39□□□□□ -1.39
SMC5-202ENST00000471372 PLAC1Q9HBJ0 212 aa6.39□□□□□ -1.39
SMC5-202ENST00000471372 FBXW2Q9UKT8 454 aa6.39□□□□□ -1.39
SMC5-202ENST00000471372 SYCE3A1L190 88 aa6.38□□□□□ -1.39
SMC5-202ENST00000471372 GOLGA6L9A6NEM1 432 aa6.38□□□□□ -1.39
SMC5-202ENST00000471372 SDR42E2A6NKP2 422 aa6.38□□□□□ -1.39
SMC5-202ENST00000471372 DUXAA6NLW8 204 aa6.38□□□□□ -1.39
SMC5-202ENST00000471372 TMEM178BH3BS89 294 aa6.38□□□□□ -1.39
SMC5-202ENST00000471372 PRPSAP2O60256 369 aa6.38□□□□□ -1.39
SMC5-202ENST00000471372 FGF2P09038 288 aa6.38□□□□□ -1.39
SMC5-202ENST00000471372 EPORP19235 508 aa6.38□□□□□ -1.39
SMC5-202ENST00000471372 CORO1AP31146 461 aaKnown RBP6.38□□□□□ -1.39
SMC5-202ENST00000471372 SERPINB6P35237 376 aa6.38□□□□□ -1.39
SMC5-202ENST00000471372 RGS7P49802 495 aa6.38□□□□□ -1.39
SMC5-202ENST00000471372 NUDT6P53370 316 aa6.38□□□□□ -1.39
SMC5-202ENST00000471372 ELLP55199 621 aaPredicted RBP6.38□□□□□ -1.39
SMC5-202ENST00000471372 EVCP57679 992 aa6.38□□□□□ -1.39
SMC5-202ENST00000471372 DLK1P80370 383 aa6.38□□□□□ -1.39
SMC5-202ENST00000471372 PTGR1Q14914 329 aa6.38□□□□□ -1.39
SMC5-202ENST00000471372 AARDQ4LEZ3 155 aa6.38□□□□□ -1.39
SMC5-202ENST00000471372 GRTP1Q5TC63 336 aa6.38□□□□□ -1.39
SMC5-202ENST00000471372 PIGWQ7Z7B1 504 aa6.38□□□□□ -1.39
SMC5-202ENST00000471372 MAP7D3Q8IWC1 876 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms