RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 PREBQ9HCU5 417 aa5.2□□□□□ -1.58
CCDC39-202ENST00000471307 UBN1Q9NPG3 1134 aa5.2□□□□□ -1.58
CCDC39-202ENST00000471307 PCDHB16Q9NRJ7 776 aa5.2□□□□□ -1.58
CCDC39-202ENST00000471307 DDX43Q9NXZ2 648 aaKnown RBP5.2□□□□□ -1.58
CCDC39-202ENST00000471307 ZNF69Q9UC07 566 aa5.2□□□□□ -1.58
CCDC39-202ENST00000471307 STK39Q9UEW8 545 aa5.2□□□□□ -1.58
CCDC39-202ENST00000471307 PA2G4Q9UQ80 394 aaKnown RBP5.2□□□□□ -1.58
CCDC39-202ENST00000471307 A0A1W2PP11 408 aa5.19□□□□□ -1.58
CCDC39-202ENST00000471307 KANSL1LA0AUZ9 987 aa5.19□□□□□ -1.58
CCDC39-202ENST00000471307 OR5K3A6NET4 321 aa5.19□□□□□ -1.58
CCDC39-202ENST00000471307 NPIPB15A6NHN6 443 aaPredicted RBP5.19□□□□□ -1.58
CCDC39-202ENST00000471307 ANKRD66B4E2M5 251 aa5.19□□□□□ -1.58
CCDC39-202ENST00000471307 BLOC1S5-TXNDC5H3BN57 136 aa5.19□□□□□ -1.58
CCDC39-202ENST00000471307 DAB1O75553 588 aa5.19□□□□□ -1.58
CCDC39-202ENST00000471307 BBOX1O75936 387 aa5.19□□□□□ -1.58
CCDC39-202ENST00000471307 IL7RP16871 459 aa5.19□□□□□ -1.58
CCDC39-202ENST00000471307 ALDH1B1P30837 517 aa5.19□□□□□ -1.58
CCDC39-202ENST00000471307 PRCPP42785 496 aa5.19□□□□□ -1.58
CCDC39-202ENST00000471307 ARCN1P48444 511 aaKnown RBP5.19□□□□□ -1.58
CCDC39-202ENST00000471307 NR2C2P49116 596 aa5.19□□□□□ -1.58
CCDC39-202ENST00000471307 HARS2P49590 506 aaKnown RBP5.19□□□□□ -1.58
CCDC39-202ENST00000471307 RPS8P62241 208 aaKnown RBP5.19□□□□□ -1.58
CCDC39-202ENST00000471307 MRPS34P82930 218 aaKnown RBP5.19□□□□□ -1.58
CCDC39-202ENST00000471307 RUNX1T1Q06455 604 aa5.19□□□□□ -1.58
CCDC39-202ENST00000471307 CSTF3Q12996 717 aaKnown RBP5.19□□□□□ -1.58
CCDC39-202ENST00000471307 ACVR2BQ13705 512 aa5.19□□□□□ -1.58
CCDC39-202ENST00000471307 ADIPOQQ15848 244 aa5.19□□□□□ -1.58
CCDC39-202ENST00000471307 CDONQ4KMG0 1287 aa5.19□□□□□ -1.58
CCDC39-202ENST00000471307 SOWAHCQ53LP3 525 aaPredicted RBP5.19□□□□□ -1.58
CCDC39-202ENST00000471307 ARHGAP17Q68EM7 881 aa5.19□□□□□ -1.58
CCDC39-202ENST00000471307 RDM1Q8NG50 284 aa5.19□□□□□ -1.58
CCDC39-202ENST00000471307 METTL6Q8TCB7 284 aa5.19□□□□□ -1.58
CCDC39-202ENST00000471307 TM9SF4Q92544 642 aa5.19□□□□□ -1.58
CCDC39-202ENST00000471307 PHF21AQ96BD5 680 aa5.19□□□□□ -1.58
CCDC39-202ENST00000471307 ZNF354BQ96LW1 612 aa5.19□□□□□ -1.58
CCDC39-202ENST00000471307 PIP5K1AQ99755 562 aa5.19□□□□□ -1.58
CCDC39-202ENST00000471307 SCPEP1Q9HB40 452 aa5.19□□□□□ -1.58
CCDC39-202ENST00000471307 CWC15Q9P013 229 aaKnown RBP5.19□□□□□ -1.58
CCDC39-202ENST00000471307 DDX60Q8IY21 1712 aaKnown RBP5.19□□□□□ -1.58
CCDC39-202ENST00000471307 MROH5Q6ZUA9 1318 aa5.19□□□□□ -1.58
CCDC39-202ENST00000471307 LAMB2P55268 1798 aa5.19□□□□□ -1.58
CCDC39-202ENST00000471307 ABCC12Q96J65 1359 aa5.18□□□□□ -1.58
CCDC39-202ENST00000471307 NRXN2Q9P2S2 1712 aa5.18□□□□□ -1.58
CCDC39-202ENST00000471307 SNED1Q8TER0 1413 aa5.18□□□□□ -1.58
CCDC39-202ENST00000471307 A0A1B0GVC2 190 aa5.18□□□□□ -1.58
CCDC39-202ENST00000471307 A6NLC8 198 aa5.18□□□□□ -1.58
CCDC39-202ENST00000471307 H0YIN7 160 aa5.18□□□□□ -1.58
CCDC39-202ENST00000471307 CTSVO60911 334 aa5.18□□□□□ -1.58
CCDC39-202ENST00000471307 IPO7O95373 1038 aaKnown RBP5.18□□□□□ -1.58
CCDC39-202ENST00000471307 LDLRP01130 860 aa5.18□□□□□ -1.58
CCDC39-202ENST00000471307 NR1D1P20393 614 aa5.18□□□□□ -1.58
CCDC39-202ENST00000471307 CASP2P42575 452 aa5.18□□□□□ -1.58
CCDC39-202ENST00000471307 SETQ01105 290 aaPredicted RBP5.18□□□□□ -1.58
CCDC39-202ENST00000471307 TFCP2Q12800 502 aa5.18□□□□□ -1.58
CCDC39-202ENST00000471307 GRAPQ13588 217 aa5.18□□□□□ -1.58
CCDC39-202ENST00000471307 PDE1CQ14123 709 aaPredicted RBP5.18□□□□□ -1.58
CCDC39-202ENST00000471307 PNLIPRP3Q17RR3 467 aa5.18□□□□□ -1.58
CCDC39-202ENST00000471307 ZNF876PQ49A33 203 aa5.18□□□□□ -1.58
CCDC39-202ENST00000471307 NME8Q8N427 588 aa5.18□□□□□ -1.58
CCDC39-202ENST00000471307 OR1J2Q8NGS2 313 aa5.18□□□□□ -1.58
CCDC39-202ENST00000471307 RRP36Q96EU6 259 aaKnown RBP5.18□□□□□ -1.58
CCDC39-202ENST00000471307 STAMBPL1Q96FJ0 436 aa5.18□□□□□ -1.58
CCDC39-202ENST00000471307 SEPT5Q99719 369 aaPredicted RBP5.18□□□□□ -1.58
CCDC39-202ENST00000471307 PUS3Q9BZE2 481 aaKnown RBP5.18□□□□□ -1.58
CCDC39-202ENST00000471307 ANKRD2Q9GZV1 360 aa5.18□□□□□ -1.58
CCDC39-202ENST00000471307 PDCL3Q9H2J4 239 aa5.18□□□□□ -1.58
CCDC39-202ENST00000471307 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.18□□□□□ -1.58
CCDC39-202ENST00000471307 TMEM98Q9Y2Y6 226 aa5.18□□□□□ -1.58
CCDC39-202ENST00000471307 TGFB1I1O43294 461 aa5.17□□□□□ -1.58
CCDC39-202ENST00000471307 SLC25A12O75746 678 aa5.17□□□□□ -1.58
CCDC39-202ENST00000471307 BAG4O95429 457 aaKnown RBP5.17□□□□□ -1.58
CCDC39-202ENST00000471307 MX1P20591 662 aa5.17□□□□□ -1.58
CCDC39-202ENST00000471307 ICAM3P32942 547 aa5.17□□□□□ -1.58
CCDC39-202ENST00000471307 BSGP35613 385 aa5.17□□□□□ -1.58
CCDC39-202ENST00000471307 COG7P83436 770 aa5.17□□□□□ -1.58
CCDC39-202ENST00000471307 TMEM115Q12893 351 aaPredicted RBP5.17□□□□□ -1.58
CCDC39-202ENST00000471307 ARHGAP11AQ6P4F7 1023 aa5.17□□□□□ -1.58
CCDC39-202ENST00000471307 RAD9BQ6WBX8 426 aa5.17□□□□□ -1.58
CCDC39-202ENST00000471307 AACSQ86V21 672 aa5.17□□□□□ -1.58
CCDC39-202ENST00000471307 RNF168Q8IYW5 571 aaPredicted RBP5.17□□□□□ -1.58
CCDC39-202ENST00000471307 TAS1R2Q8TE23 839 aa5.17□□□□□ -1.58
CCDC39-202ENST00000471307 SLC44A1Q8WWI5 657 aa5.17□□□□□ -1.58
CCDC39-202ENST00000471307 LITAFQ99732 161 aa5.17□□□□□ -1.58
CCDC39-202ENST00000471307 TMEM39BQ9GZU3 492 aa5.17□□□□□ -1.58
CCDC39-202ENST00000471307 IL1RAPL2Q9NP60 686 aa5.17□□□□□ -1.58
CCDC39-202ENST00000471307 ZNF624Q9P2J8 865 aaPredicted RBP5.17□□□□□ -1.58
CCDC39-202ENST00000471307 FBXW11Q9UKB1 542 aa5.17□□□□□ -1.58
CCDC39-202ENST00000471307 TTC41PQ6P2S7 1318 aa5.17□□□□□ -1.58
CCDC39-202ENST00000471307 A0A1B0GUL7 405 aa5.16□□□□□ -1.58
CCDC39-202ENST00000471307 A0A1W2PPH5 198 aa5.16□□□□□ -1.58
CCDC39-202ENST00000471307 A0A1W2PPI3 338 aa5.16□□□□□ -1.58
CCDC39-202ENST00000471307 EIF4E1BA6NMX2 242 aaKnown RBP5.16□□□□□ -1.58
CCDC39-202ENST00000471307 SMIM1B2RUZ4 78 aa5.16□□□□□ -1.58
CCDC39-202ENST00000471307 ELF1P32519 619 aa5.16□□□□□ -1.58
CCDC39-202ENST00000471307 F2RL1P55085 397 aa5.16□□□□□ -1.58
CCDC39-202ENST00000471307 KRTAP10-5P60370 271 aa5.16□□□□□ -1.58
CCDC39-202ENST00000471307 TIMM10P62072 90 aa5.16□□□□□ -1.58
CCDC39-202ENST00000471307 TFAP4Q01664 338 aa5.16□□□□□ -1.58
CCDC39-202ENST00000471307 GOLGA8DPQ0D2H9 430 aa5.16□□□□□ -1.58
CCDC39-202ENST00000471307 FRG1Q14331 258 aaKnown RBP5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms