RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 CDR2Q01850 454 aa8.7□□□□□ -1.02
SYNGAP1-205ENST00000470232 DHX9Q08211 1270 aaKnown RBP8.7□□□□□ -1.02
SYNGAP1-205ENST00000470232 ADCY2Q08462 1091 aa8.7□□□□□ -1.02
SYNGAP1-205ENST00000470232 ZNF844Q08AG5 666 aa8.7□□□□□ -1.02
SYNGAP1-205ENST00000470232 IFFO1Q0D2I5 559 aa8.7□□□□□ -1.02
SYNGAP1-205ENST00000470232 TRAF2Q12933 501 aa8.7□□□□□ -1.02
SYNGAP1-205ENST00000470232 ATP1A4Q13733 1029 aa8.7□□□□□ -1.02
SYNGAP1-205ENST00000470232 SSPNQ14714 243 aa8.7□□□□□ -1.02
SYNGAP1-205ENST00000470232 PLCL1Q15111 1095 aa8.7□□□□□ -1.02
SYNGAP1-205ENST00000470232 TCEAL1Q15170 157 aa8.7□□□□□ -1.02
SYNGAP1-205ENST00000470232 KRT71Q3SY84 523 aa8.7□□□□□ -1.02
SYNGAP1-205ENST00000470232 ERMARDQ5T6L9 678 aa8.7□□□□□ -1.02
SYNGAP1-205ENST00000470232 MARC1Q5VT66 337 aa8.7□□□□□ -1.02
SYNGAP1-205ENST00000470232 FCRL6Q6DN72 434 aa8.7□□□□□ -1.02
SYNGAP1-205ENST00000470232 MTFR2Q6P444 385 aa8.7□□□□□ -1.02
SYNGAP1-205ENST00000470232 ABRAXAS1Q6UWZ7 409 aa8.7□□□□□ -1.02
SYNGAP1-205ENST00000470232 WASH2PQ6VEQ5 465 aa8.7□□□□□ -1.02
SYNGAP1-205ENST00000470232 Q6ZS92 163 aa8.7□□□□□ -1.02
SYNGAP1-205ENST00000470232 RFLNAQ6ZTI6 216 aa8.7□□□□□ -1.02
SYNGAP1-205ENST00000470232 TMC3Q7Z5M5 1100 aa8.7□□□□□ -1.02
SYNGAP1-205ENST00000470232 ARHGAP12Q8IWW6 846 aa8.7□□□□□ -1.02
SYNGAP1-205ENST00000470232 DSELQ8IZU8 1212 aa8.7□□□□□ -1.02
SYNGAP1-205ENST00000470232 NXPE1Q8N323 547 aa8.7□□□□□ -1.02
SYNGAP1-205ENST00000470232 GALNT16Q8N428 558 aa8.7□□□□□ -1.02
SYNGAP1-205ENST00000470232 D2HGDHQ8N465 521 aa8.7□□□□□ -1.02
SYNGAP1-205ENST00000470232 C3orf20Q8ND61 904 aa8.7□□□□□ -1.02
SYNGAP1-205ENST00000470232 EPS8L1Q8TE68 723 aa8.7□□□□□ -1.02
SYNGAP1-205ENST00000470232 RSC1A1Q92681 617 aa8.7□□□□□ -1.02
SYNGAP1-205ENST00000470232 NSMCE3Q96MG7 304 aa8.7□□□□□ -1.02
SYNGAP1-205ENST00000470232 RUNDC3BQ96NL0 473 aa8.7□□□□□ -1.02
SYNGAP1-205ENST00000470232 C17orf62Q9BQA9 187 aa8.7□□□□□ -1.02
SYNGAP1-205ENST00000470232 DPH2Q9BQC3 489 aaPredicted RBP8.7□□□□□ -1.02
SYNGAP1-205ENST00000470232 MGME1Q9BQP7 344 aa8.7□□□□□ -1.02
SYNGAP1-205ENST00000470232 SLC7A5P2Q9GIP4 190 aa8.7□□□□□ -1.02
SYNGAP1-205ENST00000470232 DHX35Q9H5Z1 703 aaKnown RBP8.7□□□□□ -1.02
SYNGAP1-205ENST00000470232 TRIM39Q9HCM9 518 aa8.7□□□□□ -1.02
SYNGAP1-205ENST00000470232 SLC40A1Q9NP59 571 aa8.7□□□□□ -1.02
SYNGAP1-205ENST00000470232 HAUS2Q9NVX0 235 aa8.7□□□□□ -1.02
SYNGAP1-205ENST00000470232 PKD2L2Q9NZM6 624 aa8.7□□□□□ -1.02
SYNGAP1-205ENST00000470232 SCHIP1Q9P0W5 487 aaPredicted RBP8.7□□□□□ -1.02
SYNGAP1-205ENST00000470232 CNOT6Q9ULM6 557 aaKnown RBP8.7□□□□□ -1.02
SYNGAP1-205ENST00000470232 AP4E1Q9UPM8 1137 aa8.7□□□□□ -1.02
SYNGAP1-205ENST00000470232 NFS1Q9Y697 457 aa8.7□□□□□ -1.02
SYNGAP1-205ENST00000470232 CCDC168Q8NDH2 2452 aa8.7□□□□□ -1.02
SYNGAP1-205ENST00000470232 FER1L5A0AVI2 2057 aa8.69□□□□□ -1.02
SYNGAP1-205ENST00000470232 MDC1Q14676 2089 aaKnown RBP8.69□□□□□ -1.02
SYNGAP1-205ENST00000470232 PIKFYVEQ9Y2I7 2098 aa8.69□□□□□ -1.02
SYNGAP1-205ENST00000470232 NAV3Q8IVL0 2385 aa8.69□□□□□ -1.02
SYNGAP1-205ENST00000470232 MTORP42345 2549 aa8.69□□□□□ -1.02
SYNGAP1-205ENST00000470232 A0A0J9YYE9 177 aa8.69□□□□□ -1.02
SYNGAP1-205ENST00000470232 TLCD2A6NGC4 264 aa8.69□□□□□ -1.02
SYNGAP1-205ENST00000470232 C9J4A7 227 aa8.69□□□□□ -1.02
SYNGAP1-205ENST00000470232 MAP3K7O43318 606 aa8.69□□□□□ -1.02
SYNGAP1-205ENST00000470232 VEGFDO43915 354 aa8.69□□□□□ -1.02
SYNGAP1-205ENST00000470232 SLC25A14O95258 325 aaPredicted RBP8.69□□□□□ -1.02
SYNGAP1-205ENST00000470232 ZBTB11O95625 1053 aaPredicted RBP8.69□□□□□ -1.02
SYNGAP1-205ENST00000470232 TRBC1P01850 177 aa8.69□□□□□ -1.02
SYNGAP1-205ENST00000470232 FTLP02792 175 aaPredicted RBP8.69□□□□□ -1.02
SYNGAP1-205ENST00000470232 HBQ1P09105 142 aa8.69□□□□□ -1.02
SYNGAP1-205ENST00000470232 ZNF7P17097 686 aaPredicted RBP8.69□□□□□ -1.02
SYNGAP1-205ENST00000470232 ZNF8P17098 575 aaPredicted RBP8.69□□□□□ -1.02
SYNGAP1-205ENST00000470232 AGXTP21549 392 aa8.69□□□□□ -1.02
SYNGAP1-205ENST00000470232 HTR1EP28566 365 aa8.69□□□□□ -1.02
SYNGAP1-205ENST00000470232 EIF3BP55884 814 aaKnown RBP8.69□□□□□ -1.02
SYNGAP1-205ENST00000470232 PPP2R2AP63151 447 aa8.69□□□□□ -1.02
SYNGAP1-205ENST00000470232 ITKQ08881 620 aa8.69□□□□□ -1.02
SYNGAP1-205ENST00000470232 GPR18Q14330 331 aa8.69□□□□□ -1.02
SYNGAP1-205ENST00000470232 MESDQ14696 234 aa8.69□□□□□ -1.02
SYNGAP1-205ENST00000470232 KCNAB1Q14722 419 aa8.69□□□□□ -1.02
SYNGAP1-205ENST00000470232 LLGL1Q15334 1064 aa8.69□□□□□ -1.02
SYNGAP1-205ENST00000470232 ODF2Q5BJF6 829 aa8.69□□□□□ -1.02
SYNGAP1-205ENST00000470232 PLEKHS1Q5SXH7 462 aa8.69□□□□□ -1.02
SYNGAP1-205ENST00000470232 AGAP9Q5VTM2 703 aa8.69□□□□□ -1.02
SYNGAP1-205ENST00000470232 DUPD1Q68J44 220 aa8.69□□□□□ -1.02
SYNGAP1-205ENST00000470232 DNAJC24Q6P3W2 148 aa8.69□□□□□ -1.02
SYNGAP1-205ENST00000470232 DCUN1D2Q6PH85 259 aa8.69□□□□□ -1.02
SYNGAP1-205ENST00000470232 ARHGAP36Q6ZRI8 547 aa8.69□□□□□ -1.02
SYNGAP1-205ENST00000470232 RFX8Q6ZV50 586 aa8.69□□□□□ -1.02
SYNGAP1-205ENST00000470232 CUZD1Q86UP6 607 aa8.69□□□□□ -1.02
SYNGAP1-205ENST00000470232 LRRTM4Q86VH4 590 aa8.69□□□□□ -1.02
SYNGAP1-205ENST00000470232 HOOK3Q86VS8 718 aa8.69□□□□□ -1.02
SYNGAP1-205ENST00000470232 CARFQ8N187 725 aa8.69□□□□□ -1.02
SYNGAP1-205ENST00000470232 OTUD6BQ8N6M0 293 aa8.69□□□□□ -1.02
SYNGAP1-205ENST00000470232 FAR1Q8WVX9 515 aa8.69□□□□□ -1.02
SYNGAP1-205ENST00000470232 TEKT4Q8WW24 435 aa8.69□□□□□ -1.02
SYNGAP1-205ENST00000470232 RELTQ969Z4 430 aa8.69□□□□□ -1.02
SYNGAP1-205ENST00000470232 ZNF653Q96CK0 615 aa8.69□□□□□ -1.02
SYNGAP1-205ENST00000470232 FMO2Q99518 471 aa8.69□□□□□ -1.02
SYNGAP1-205ENST00000470232 MAP3K3Q99759 626 aa8.69□□□□□ -1.02
SYNGAP1-205ENST00000470232 ERP44Q9BS26 406 aa8.69□□□□□ -1.02
SYNGAP1-205ENST00000470232 TIMM29Q9BSF4 260 aa8.69□□□□□ -1.02
SYNGAP1-205ENST00000470232 DHRS4Q9BTZ2 278 aa8.69□□□□□ -1.02
SYNGAP1-205ENST00000470232 OR2AG1Q9H205 316 aa8.69□□□□□ -1.02
SYNGAP1-205ENST00000470232 SYTL2Q9HCH5 934 aa8.69□□□□□ -1.02
SYNGAP1-205ENST00000470232 ATXN10Q9UBB4 475 aa8.69□□□□□ -1.02
SYNGAP1-205ENST00000470232 NOVA2Q9UNW9 492 aaKnown RBP8.69□□□□□ -1.02
SYNGAP1-205ENST00000470232 PCYT1BQ9Y5K3 369 aaPredicted RBP8.69□□□□□ -1.02
SYNGAP1-205ENST00000470232 ALG6Q9Y672 507 aa8.69□□□□□ -1.02
SYNGAP1-205ENST00000470232 ZGRF1Q86YA3 2104 aa8.69□□□□□ -1.02
SYNGAP1-205ENST00000470232 E7EVH7 732 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms