RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 WNT5BQ9H1J7 359 aa4.85□□□□□ -1.63
LSM5-209ENST00000468872 TXLNGQ9NUQ3 528 aa4.85□□□□□ -1.63
LSM5-209ENST00000468872 RALYQ9UKM9 306 aaKnown RBP4.85□□□□□ -1.63
LSM5-209ENST00000468872 LIPGQ9Y5X9 500 aa4.85□□□□□ -1.63
LSM5-209ENST00000468872 CGNL1Q0VF96 1302 aa4.85□□□□□ -1.63
LSM5-209ENST00000468872 SCRIBQ14160 1630 aa4.84□□□□□ -1.63
LSM5-209ENST00000468872 LAMC3Q9Y6N6 1575 aa4.84□□□□□ -1.63
LSM5-209ENST00000468872 TEX13DA0A0J9YY54 714 aaPredicted RBP4.84□□□□□ -1.63
LSM5-209ENST00000468872 MAGEA13PA6NCF6 341 aa4.84□□□□□ -1.63
LSM5-209ENST00000468872 GPR137BO60478 399 aa4.84□□□□□ -1.63
LSM5-209ENST00000468872 TSPAN1O60635 241 aa4.84□□□□□ -1.63
LSM5-209ENST00000468872 LDLRP01130 860 aa4.84□□□□□ -1.63
LSM5-209ENST00000468872 RPN1P04843 607 aaKnown RBP4.84□□□□□ -1.63
LSM5-209ENST00000468872 OR52Z1P0C646 297 aa4.84□□□□□ -1.63
LSM5-209ENST00000468872 OR2T7P0C7T2 308 aa4.84□□□□□ -1.63
LSM5-209ENST00000468872 FDPSP14324 419 aaKnown RBP4.84□□□□□ -1.63
LSM5-209ENST00000468872 DAOP14920 347 aa4.84□□□□□ -1.63
LSM5-209ENST00000468872 CYP11B2P19099 503 aa4.84□□□□□ -1.63
LSM5-209ENST00000468872 NPY4RP50391 375 aa4.84□□□□□ -1.63
LSM5-209ENST00000468872 MMP15P51511 669 aa4.84□□□□□ -1.63
LSM5-209ENST00000468872 ART1P52961 327 aa4.84□□□□□ -1.63
LSM5-209ENST00000468872 RPL36AP83881 106 aaKnown RBP4.84□□□□□ -1.63
LSM5-209ENST00000468872 RBPJQ06330 500 aa4.84□□□□□ -1.63
LSM5-209ENST00000468872 ACSM1Q08AH1 577 aa4.84□□□□□ -1.63
LSM5-209ENST00000468872 PRKAA1Q13131 559 aa4.84□□□□□ -1.63
LSM5-209ENST00000468872 STXBP5Q5T5C0 1151 aa4.84□□□□□ -1.63
LSM5-209ENST00000468872 PLEKHM3Q6ZWE6 761 aa4.84□□□□□ -1.63
LSM5-209ENST00000468872 ERN2Q76MJ5 926 aaKnown RBP4.84□□□□□ -1.63
LSM5-209ENST00000468872 DGLUCYQ7Z3D6 616 aa4.84□□□□□ -1.63
LSM5-209ENST00000468872 DNAJB7Q7Z6W7 309 aaPredicted RBP4.84□□□□□ -1.63
LSM5-209ENST00000468872 SFR1Q86XK3 245 aa4.84□□□□□ -1.63
LSM5-209ENST00000468872 SLC4A11Q8NBS3 891 aa4.84□□□□□ -1.63
LSM5-209ENST00000468872 LNX1Q8TBB1 728 aaPredicted RBP4.84□□□□□ -1.63
LSM5-209ENST00000468872 DAZLQ92904 295 aaKnown RBP4.84□□□□□ -1.63
LSM5-209ENST00000468872 TTC14Q96N46 770 aa4.84□□□□□ -1.63
LSM5-209ENST00000468872 RAB3IPQ96QF0 476 aaPredicted RBP4.84□□□□□ -1.63
LSM5-209ENST00000468872 SLX1AQ9BQ83 275 aa4.84□□□□□ -1.63
LSM5-209ENST00000468872 EBF2Q9HAK2 575 aa4.84□□□□□ -1.63
LSM5-209ENST00000468872 TRPC7Q9HCX4 862 aa4.84□□□□□ -1.63
LSM5-209ENST00000468872 KLHL1Q9NR64 748 aa4.84□□□□□ -1.63
LSM5-209ENST00000468872 CHCHD3Q9NX63 227 aaKnown RBP4.84□□□□□ -1.63
LSM5-209ENST00000468872 PCDHGB1Q9Y5G3 927 aa4.84□□□□□ -1.63
LSM5-209ENST00000468872 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.84□□□□□ -1.634e-8■■□□□ 11.9
LSM5-209ENST00000468872 LTBP4Q8N2S1 1624 aa4.83□□□□□ -1.64
LSM5-209ENST00000468872 GAPVD1Q14C86 1478 aa4.83□□□□□ -1.64
LSM5-209ENST00000468872 CTAGE9A4FU28 777 aa4.83□□□□□ -1.64
LSM5-209ENST00000468872 C15orf62A8K5M9 175 aa4.83□□□□□ -1.64
LSM5-209ENST00000468872 PENKP01210 267 aaPredicted RBP4.83□□□□□ -1.64
LSM5-209ENST00000468872 KRT19P08727 400 aa4.83□□□□□ -1.64
LSM5-209ENST00000468872 CTAGE8P0CG41 777 aa4.83□□□□□ -1.64
LSM5-209ENST00000468872 GP5P40197 560 aa4.83□□□□□ -1.64
LSM5-209ENST00000468872 MTHFRP42898 656 aa4.83□□□□□ -1.64
LSM5-209ENST00000468872 ZNF75DP51815 510 aa4.83□□□□□ -1.64
LSM5-209ENST00000468872 ZNF273Q14593 569 aa4.83□□□□□ -1.64
LSM5-209ENST00000468872 IZUMO4Q1ZYL8 232 aa4.83□□□□□ -1.64
LSM5-209ENST00000468872 PLA2G4FQ68DD2 849 aa4.83□□□□□ -1.64
LSM5-209ENST00000468872 KRT39Q6A163 491 aa4.83□□□□□ -1.64
LSM5-209ENST00000468872 KLC3Q6P597 504 aa4.83□□□□□ -1.64
LSM5-209ENST00000468872 FAM171BQ6P995 826 aa4.83□□□□□ -1.64
LSM5-209ENST00000468872 PRSS57Q6UWY2 283 aa4.83□□□□□ -1.64
LSM5-209ENST00000468872 TMPRSS11FQ6ZWK6 438 aa4.83□□□□□ -1.64
LSM5-209ENST00000468872 ARMC9Q7Z3E5 817 aa4.83□□□□□ -1.64
LSM5-209ENST00000468872 PTOV1Q86YD1 416 aa4.83□□□□□ -1.64
LSM5-209ENST00000468872 FAM114A1Q8IWE2 563 aa4.83□□□□□ -1.64
LSM5-209ENST00000468872 CTAGE4Q8IX94 777 aa4.83□□□□□ -1.64
LSM5-209ENST00000468872 MAML2Q8IZL2 1156 aaPredicted RBP4.83□□□□□ -1.64
LSM5-209ENST00000468872 FAM9BQ8IZU0 186 aa4.83□□□□□ -1.64
LSM5-209ENST00000468872 OR5M8Q8NGP6 311 aa4.83□□□□□ -1.64
LSM5-209ENST00000468872 SLAMF9Q96A28 289 aa4.83□□□□□ -1.64
LSM5-209ENST00000468872 MTERF3Q96E29 417 aa4.83□□□□□ -1.64
LSM5-209ENST00000468872 ZNF558Q96NG5 402 aa4.83□□□□□ -1.64
LSM5-209ENST00000468872 NOL7Q9UMY1 257 aaKnown RBP4.83□□□□□ -1.64
LSM5-209ENST00000468872 GRIP1Q9Y3R0 1128 aa4.83□□□□□ -1.64
LSM5-209ENST00000468872 SPIN1Q9Y657 262 aaPredicted RBP4.83□□□□□ -1.64
LSM5-209ENST00000468872 ZNF608Q9ULD9 1512 aaPredicted RBP4.82□□□□□ -1.64
LSM5-209ENST00000468872 NCAPD3P42695 1498 aa4.82□□□□□ -1.64
LSM5-209ENST00000468872 IGHV4OR15-8A0A075B7B6 117 aa4.82□□□□□ -1.64
LSM5-209ENST00000468872 A0A1W2PPQ1 181 aa4.82□□□□□ -1.64
LSM5-209ENST00000468872 ELOVL7A1L3X0 281 aa4.82□□□□□ -1.64
LSM5-209ENST00000468872 CCER2I3L3R5 266 aa4.82□□□□□ -1.64
LSM5-209ENST00000468872 PTGESO14684 152 aa4.82□□□□□ -1.64
LSM5-209ENST00000468872 MEIS2O14770 477 aa4.82□□□□□ -1.64
LSM5-209ENST00000468872 TFAP2AP05549 437 aa4.82□□□□□ -1.64
LSM5-209ENST00000468872 LIPFP07098 398 aa4.82□□□□□ -1.64
LSM5-209ENST00000468872 RAB40ALP0C0E4 278 aa4.82□□□□□ -1.64
LSM5-209ENST00000468872 HOXC8P31273 242 aa4.82□□□□□ -1.64
LSM5-209ENST00000468872 AHRP35869 848 aa4.82□□□□□ -1.64
LSM5-209ENST00000468872 PSMC4P43686 418 aa4.82□□□□□ -1.64
LSM5-209ENST00000468872 FUT6P51993 359 aa4.82□□□□□ -1.64
LSM5-209ENST00000468872 TERF1P54274 439 aa4.82□□□□□ -1.64
LSM5-209ENST00000468872 EEF1A1P68104 462 aaKnown RBP4.82□□□□□ -1.64
LSM5-209ENST00000468872 RBP5P82980 135 aa4.82□□□□□ -1.64
LSM5-209ENST00000468872 PPIGQ13427 754 aaKnown RBP eCLIP4.82□□□□□ -1.64
LSM5-209ENST00000468872 SLC39A14Q15043 492 aa4.82□□□□□ -1.64
LSM5-209ENST00000468872 KIF19Q2TAC6 998 aa4.82□□□□□ -1.64
LSM5-209ENST00000468872 C9orf50Q5SZB4 431 aa4.82□□□□□ -1.64
LSM5-209ENST00000468872 EEF1A1P5Q5VTE0 462 aa4.82□□□□□ -1.64
LSM5-209ENST00000468872 C9orf57Q5W0N0 161 aa4.82□□□□□ -1.64
LSM5-209ENST00000468872 PPP1R21Q6ZMI0 780 aa4.82□□□□□ -1.64
LSM5-209ENST00000468872 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.82□□□□□ -1.641e-10■■■□□ 17.1
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms