RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 ACSS2Q9NR19 701 aa18.27■□□□□ 0.52
CAPN3-209ENST00000466222 MRGBPQ9NV56 204 aa18.27■□□□□ 0.52
CAPN3-209ENST00000466222 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.27■□□□□ 0.52
CAPN3-209ENST00000466222 USP36Q9P275 1121 aaKnown RBP18.27■□□□□ 0.52
CAPN3-209ENST00000466222 FAM8A1Q9UBU6 413 aa18.27■□□□□ 0.52
CAPN3-209ENST00000466222 GNPTGQ9UJJ9 305 aa18.27■□□□□ 0.52
CAPN3-209ENST00000466222 CA5BQ9Y2D0 317 aa18.27■□□□□ 0.52
CAPN3-209ENST00000466222 SIT1Q9Y3P8 196 aa18.27■□□□□ 0.52
CAPN3-209ENST00000466222 PCDHB1Q9Y5F3 818 aa18.27■□□□□ 0.52
CAPN3-209ENST00000466222 A0A087X1B8 175 aa18.27■□□□□ 0.51
CAPN3-209ENST00000466222 GOLGA8QA0A0J9YX86 632 aa18.27■□□□□ 0.51
CAPN3-209ENST00000466222 GOLGA8OA6NCC3 632 aa18.27■□□□□ 0.51
CAPN3-209ENST00000466222 EIF4E1BA6NMX2 242 aaKnown RBP18.27■□□□□ 0.51
CAPN3-209ENST00000466222 GOLGA8NF8WBI6 632 aa18.27■□□□□ 0.51
CAPN3-209ENST00000466222 CASQ2O14958 399 aaPredicted RBP18.27■□□□□ 0.51
CAPN3-209ENST00000466222 ZBTB14O43829 449 aa18.27■□□□□ 0.51
CAPN3-209ENST00000466222 MSH3P20585 1137 aa18.27■□□□□ 0.51
CAPN3-209ENST00000466222 CCR7P32248 378 aa18.27■□□□□ 0.51
CAPN3-209ENST00000466222 ZXDAP98168 799 aa18.27■□□□□ 0.51
CAPN3-209ENST00000466222 HEATR4Q86WZ0 1026 aa18.27■□□□□ 0.51
CAPN3-209ENST00000466222 PDSS2Q86YH6 399 aa18.27■□□□□ 0.51
CAPN3-209ENST00000466222 SLC26A7Q8TE54 656 aa18.27■□□□□ 0.51
CAPN3-209ENST00000466222 OR2AG1Q9H205 316 aa18.27■□□□□ 0.51
CAPN3-209ENST00000466222 TRMT6Q9UJA5 497 aaKnown RBP18.27■□□□□ 0.51
CAPN3-209ENST00000466222 INVSQ9Y283 1065 aa18.27■□□□□ 0.51
CAPN3-209ENST00000466222 PRKAB1Q9Y478 270 aa18.27■□□□□ 0.51
CAPN3-209ENST00000466222 TMEM202A6NGA9 273 aa18.26■□□□□ 0.51
CAPN3-209ENST00000466222 TSPAN12O95859 305 aa18.26■□□□□ 0.51
CAPN3-209ENST00000466222 SERPINB5P36952 375 aa18.26■□□□□ 0.51
CAPN3-209ENST00000466222 PHYKPLQ8IUZ5 450 aa18.26■□□□□ 0.51
CAPN3-209ENST00000466222 RAVER1Q8IY67 606 aaKnown RBP18.26■□□□□ 0.51
CAPN3-209ENST00000466222 CLDN23Q96B33 292 aa18.26■□□□□ 0.51
CAPN3-209ENST00000466222 PTERQ96BW5 349 aa18.26■□□□□ 0.51
CAPN3-209ENST00000466222 TOE1Q96GM8 510 aaKnown RBP18.26■□□□□ 0.51
CAPN3-209ENST00000466222 SCYL1Q96KG9 808 aa18.26■□□□□ 0.51
CAPN3-209ENST00000466222 TSC22D3Q99576 134 aa18.26■□□□□ 0.51
CAPN3-209ENST00000466222 KLHL4Q9C0H6 718 aa18.26■□□□□ 0.51
CAPN3-209ENST00000466222 C6orf106Q9H6K1 298 aaPredicted RBP18.26■□□□□ 0.51
CAPN3-209ENST00000466222 PREBQ9HCU5 417 aa18.26■□□□□ 0.51
CAPN3-209ENST00000466222 XPR1Q9UBH6 696 aa18.26■□□□□ 0.51
CAPN3-209ENST00000466222 E9PBE3 544 aa18.25■□□□□ 0.51
CAPN3-209ENST00000466222 KLHL41O60662 606 aa18.25■□□□□ 0.51
CAPN3-209ENST00000466222 ATG13O75143 517 aa18.25■□□□□ 0.51
CAPN3-209ENST00000466222 LYNP07948 512 aa18.25■□□□□ 0.51
CAPN3-209ENST00000466222 LTA4HP09960 611 aaKnown RBP18.25■□□□□ 0.51
CAPN3-209ENST00000466222 CLDN2P57739 230 aa18.25■□□□□ 0.51
CAPN3-209ENST00000466222 LDLRAP1Q5SW96 308 aa18.25■□□□□ 0.51
CAPN3-209ENST00000466222 KIAA1161Q6NSJ0 714 aa18.25■□□□□ 0.51
CAPN3-209ENST00000466222 LRRC8EQ6NSJ5 796 aa18.25■□□□□ 0.51
CAPN3-209ENST00000466222 DOK6Q6PKX4 331 aa18.25■□□□□ 0.51
CAPN3-209ENST00000466222 CHRDQ9H2X0 955 aa18.25■□□□□ 0.51
CAPN3-209ENST00000466222 ALG9Q9H6U8 611 aa18.25■□□□□ 0.51
CAPN3-209ENST00000466222 ATXN10Q9UBB4 475 aa18.25■□□□□ 0.51
CAPN3-209ENST00000466222 DHRS7Q9Y394 339 aa18.25■□□□□ 0.51
CAPN3-209ENST00000466222 MYO15AQ9UKN7 3530 aa18.25■□□□□ 0.51
CAPN3-209ENST00000466222 H0Y8X5 98 aa18.25■□□□□ 0.51
CAPN3-209ENST00000466222 NPHS1O60500 1241 aa18.25■□□□□ 0.51
CAPN3-209ENST00000466222 CDK14O94921 469 aa18.25■□□□□ 0.51
CAPN3-209ENST00000466222 CD1DP15813 335 aa18.25■□□□□ 0.51
CAPN3-209ENST00000466222 TFEBP19484 476 aa18.25■□□□□ 0.51
CAPN3-209ENST00000466222 PIK3R1P27986 724 aa18.25■□□□□ 0.51
CAPN3-209ENST00000466222 FAM83EQ2M2I3 478 aa18.25■□□□□ 0.51
CAPN3-209ENST00000466222 ISCA2Q86U28 154 aa18.25■□□□□ 0.51
CAPN3-209ENST00000466222 NLRP8Q86W28 1048 aa18.25■□□□□ 0.51
CAPN3-209ENST00000466222 LILRA3Q8N6C8 439 aaPredicted RBP18.25■□□□□ 0.51
CAPN3-209ENST00000466222 MAPK15Q8TD08 544 aa18.25■□□□□ 0.51
CAPN3-209ENST00000466222 PYDC1Q8WXC3 89 aa18.25■□□□□ 0.51
CAPN3-209ENST00000466222 SCN8AQ9UQD0 1980 aa18.25■□□□□ 0.51
CAPN3-209ENST00000466222 LOC100653049A0A140TA62 436 aa18.24■□□□□ 0.51
CAPN3-209ENST00000466222 NEMP2A6NFY4 417 aa18.24■□□□□ 0.51
CAPN3-209ENST00000466222 SMIM24O75264 130 aa18.24■□□□□ 0.51
CAPN3-209ENST00000466222 KRT34O76011 436 aa18.24■□□□□ 0.51
CAPN3-209ENST00000466222 PDE5AO76074 875 aa18.24■□□□□ 0.51
CAPN3-209ENST00000466222 PYGLP06737 847 aa18.24■□□□□ 0.51
CAPN3-209ENST00000466222 OR56A5P0C7T3 313 aa18.24■□□□□ 0.51
CAPN3-209ENST00000466222 PIM1P11309 404 aaPredicted RBP18.24■□□□□ 0.51
CAPN3-209ENST00000466222 MPSTP25325 297 aa18.24■□□□□ 0.51
CAPN3-209ENST00000466222 IGFALSP35858 605 aa18.24■□□□□ 0.51
CAPN3-209ENST00000466222 CDK3Q00526 305 aa18.24■□□□□ 0.51
CAPN3-209ENST00000466222 AGERQ15109 404 aa18.24■□□□□ 0.51
CAPN3-209ENST00000466222 TMEM220Q6QAJ8 160 aa18.24■□□□□ 0.51
CAPN3-209ENST00000466222 PIWIL4Q7Z3Z4 852 aaKnown RBP18.24■□□□□ 0.51
CAPN3-209ENST00000466222 TMEM126BQ8IUX1 230 aa18.24■□□□□ 0.51
CAPN3-209ENST00000466222 OR2T34Q8NGX1 318 aa18.24■□□□□ 0.51
CAPN3-209ENST00000466222 LINGO1Q96FE5 620 aa18.24■□□□□ 0.51
CAPN3-209ENST00000466222 HIC2Q96JB3 615 aa18.24■□□□□ 0.51
CAPN3-209ENST00000466222 OR52B2Q96RD2 323 aa18.24■□□□□ 0.51
CAPN3-209ENST00000466222 ZNF385DQ9H6B1 395 aa18.24■□□□□ 0.51
CAPN3-209ENST00000466222 POPDC3Q9HBV1 291 aa18.24■□□□□ 0.51
CAPN3-209ENST00000466222 C6orf203Q9P0P8 240 aaPredicted RBP18.24■□□□□ 0.51
CAPN3-209ENST00000466222 CDYLQ9Y232 598 aa18.24■□□□□ 0.51
CAPN3-209ENST00000466222 COMMD10Q9Y6G5 202 aa18.24■□□□□ 0.51
CAPN3-209ENST00000466222 VPS13AQ96RL7 3174 aa18.24■□□□□ 0.51
CAPN3-209ENST00000466222 NUMA1Q14980 2115 aa18.24■□□□□ 0.51
CAPN3-209ENST00000466222 POM121BA6NF01 834 aa18.23■□□□□ 0.51
CAPN3-209ENST00000466222 TARM1B6A8C7 271 aa18.23■□□□□ 0.51
CAPN3-209ENST00000466222 CDC7O00311 574 aa18.23■□□□□ 0.51
CAPN3-209ENST00000466222 SEMA4FO95754 770 aa18.23■□□□□ 0.51
CAPN3-209ENST00000466222 ZNF8P17098 575 aaPredicted RBP18.23■□□□□ 0.51
CAPN3-209ENST00000466222 OR4D1Q15615 310 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms