RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 H3BMH7 237 aa15.21■□□□□ 0.03
SND1-203ENST00000463020 BTN3A1O00481 513 aa15.21■□□□□ 0.03
SND1-203ENST00000463020 KCNJ13O60928 360 aa15.21■□□□□ 0.03
SND1-203ENST00000463020 GYPCP04921 128 aa15.21■□□□□ 0.03
SND1-203ENST00000463020 CBSLP0DN79 551 aa15.21■□□□□ 0.03
SND1-203ENST00000463020 CDH3P22223 829 aa15.21■□□□□ 0.03
SND1-203ENST00000463020 CASQ1P31415 396 aa15.21■□□□□ 0.03
SND1-203ENST00000463020 CBSP35520 551 aa15.21■□□□□ 0.03
SND1-203ENST00000463020 MESDQ14696 234 aa15.21■□□□□ 0.03
SND1-203ENST00000463020 PDK1Q15118 436 aa15.21■□□□□ 0.03
SND1-203ENST00000463020 TMTC4Q5T4D3 741 aa15.21■□□□□ 0.03
SND1-203ENST00000463020 VWA5B1Q5TIE3 1220 aa15.21■□□□□ 0.03
SND1-203ENST00000463020 CUZD1Q86UP6 607 aa15.21■□□□□ 0.03
SND1-203ENST00000463020 IQCKQ8N0W5 287 aa15.21■□□□□ 0.03
SND1-203ENST00000463020 OR2L2Q8NH16 312 aa15.21■□□□□ 0.03
SND1-203ENST00000463020 RNF25Q96BH1 459 aaPredicted RBP15.21■□□□□ 0.03
SND1-203ENST00000463020 BARD1Q99728 777 aaKnown RBP15.21■□□□□ 0.03
SND1-203ENST00000463020 XKR8Q9H6D3 395 aa15.21■□□□□ 0.03
SND1-203ENST00000463020 ZNF552Q9H707 407 aaPredicted RBP15.21■□□□□ 0.03
SND1-203ENST00000463020 ZNHIT6Q9NWK9 470 aaKnown RBP15.21■□□□□ 0.03
SND1-203ENST00000463020 B3GNT3Q9Y2A9 372 aa15.21■□□□□ 0.03
SND1-203ENST00000463020 HYOU1Q9Y4L1 999 aa15.21■□□□□ 0.03
SND1-203ENST00000463020 ARL5AQ9Y689 179 aa15.21■□□□□ 0.03
SND1-203ENST00000463020 BZW2Q9Y6E2 419 aaKnown RBP15.21■□□□□ 0.03
SND1-203ENST00000463020 DCHS2Q6V1P9 2916 aa15.21■□□□□ 0.03
SND1-203ENST00000463020 TACC2O95359 2948 aa15.2■□□□□ 0.02
SND1-203ENST00000463020 GSAPA4D1B5 854 aa15.2■□□□□ 0.02
SND1-203ENST00000463020 MGAT4DA6NG13 374 aa15.2■□□□□ 0.02
SND1-203ENST00000463020 ZNF749O43361 778 aa15.2■□□□□ 0.02
SND1-203ENST00000463020 ALOX12BO75342 701 aa15.2■□□□□ 0.02
SND1-203ENST00000463020 CYP2A7P20853 494 aa15.2■□□□□ 0.02
SND1-203ENST00000463020 PRDX3P30048 256 aaKnown RBP15.2■□□□□ 0.02
SND1-203ENST00000463020 AKT1P31749 480 aa15.2■□□□□ 0.02
SND1-203ENST00000463020 PREPP48147 710 aa15.2■□□□□ 0.02
SND1-203ENST00000463020 SLC9A5Q14940 896 aa15.2■□□□□ 0.02
SND1-203ENST00000463020 SLC1A5Q15758 541 aa15.2■□□□□ 0.02
SND1-203ENST00000463020 ZIC1Q15915 447 aa15.2■□□□□ 0.02
SND1-203ENST00000463020 DEFB110Q30KQ9 67 aa15.2■□□□□ 0.02
SND1-203ENST00000463020 ZNF658BQ4V348 819 aaPredicted RBP15.2■□□□□ 0.02
SND1-203ENST00000463020 ZRANB3Q5FWF4 1079 aa15.2■□□□□ 0.02
SND1-203ENST00000463020 C1orf189Q5VU69 101 aa15.2■□□□□ 0.02
SND1-203ENST00000463020 ARMC6Q6NXE6 501 aa15.2■□□□□ 0.02
SND1-203ENST00000463020 GLT6D1Q7Z4J2 308 aa15.2■□□□□ 0.02
SND1-203ENST00000463020 TRIM73Q86UV7 250 aa15.2■□□□□ 0.02
SND1-203ENST00000463020 RFX6Q8HWS3 928 aa15.2■□□□□ 0.02
SND1-203ENST00000463020 OR8K1Q8NGG5 319 aa15.2■□□□□ 0.02
SND1-203ENST00000463020 DTX3LQ8TDB6 740 aa15.2■□□□□ 0.02
SND1-203ENST00000463020 C5orf34Q96MH7 638 aa15.2■□□□□ 0.02
SND1-203ENST00000463020 TRAPPC9Q96Q05 1148 aa15.2■□□□□ 0.02
SND1-203ENST00000463020 PITPNM3Q9BZ71 974 aa15.2■□□□□ 0.02
SND1-203ENST00000463020 FAM60AQ9NP50 221 aa15.2■□□□□ 0.02
SND1-203ENST00000463020 ABHD10Q9NUJ1 306 aa15.2■□□□□ 0.02
SND1-203ENST00000463020 SMOXQ9NWM0 555 aa15.2■□□□□ 0.02
SND1-203ENST00000463020 FAM153AQ9UHL3 310 aa15.2■□□□□ 0.02
SND1-203ENST00000463020 LUC7L2Q9Y383 392 aaKnown RBP15.2■□□□□ 0.02
SND1-203ENST00000463020 PCDHGA10Q9Y5H3 936 aa15.2■□□□□ 0.02
SND1-203ENST00000463020 DNMT3AQ9Y6K1 912 aaPredicted RBP15.2■□□□□ 0.02
SND1-203ENST00000463020 POLEQ07864 2286 aa15.2■□□□□ 0.02
SND1-203ENST00000463020 PRAMEF1O95521 474 aa15.19■□□□□ 0.02
SND1-203ENST00000463020 KRT1P04264 644 aa15.19■□□□□ 0.02
SND1-203ENST00000463020 GNG11P61952 73 aa15.19■□□□□ 0.02
SND1-203ENST00000463020 ZBED6P86452 979 aa15.19■□□□□ 0.02
SND1-203ENST00000463020 MFSD7Q6UXD7 560 aa15.19■□□□□ 0.02
SND1-203ENST00000463020 CFAP206Q8IYR0 622 aa15.19■□□□□ 0.02
SND1-203ENST00000463020 PHC3Q8NDX5 983 aa15.19■□□□□ 0.02
SND1-203ENST00000463020 IPMKQ8NFU5 416 aa15.19■□□□□ 0.02
SND1-203ENST00000463020 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.19■□□□□ 0.02
SND1-203ENST00000463020 SGSM3Q96HU1 749 aa15.19■□□□□ 0.02
SND1-203ENST00000463020 ZCCHC2Q9C0B9 1178 aaKnown RBP15.19■□□□□ 0.02
SND1-203ENST00000463020 SPRTNQ9H040 489 aaPredicted RBP15.19■□□□□ 0.02
SND1-203ENST00000463020 DEF6Q9H4E7 631 aa15.19■□□□□ 0.02
SND1-203ENST00000463020 C10orf88Q9H8K7 445 aa15.19■□□□□ 0.02
SND1-203ENST00000463020 L2HGDHQ9H9P8 463 aa15.19■□□□□ 0.02
SND1-203ENST00000463020 C1GALT1Q9NS00 363 aa15.19■□□□□ 0.02
SND1-203ENST00000463020 UVRAGQ9P2Y5 699 aa15.19■□□□□ 0.02
SND1-203ENST00000463020 FKBPLQ9UIM3 349 aa15.19■□□□□ 0.02
SND1-203ENST00000463020 CAPN11Q9UMQ6 739 aa15.19■□□□□ 0.02
SND1-203ENST00000463020 CDYLQ9Y232 598 aa15.19■□□□□ 0.02
SND1-203ENST00000463020 CCDC88CQ9P219 2028 aa15.19■□□□□ 0.02
SND1-203ENST00000463020 SOWAHDA6NJG2 315 aa15.18■□□□□ 0.02
SND1-203ENST00000463020 ZNF487B1APH4 448 aa15.18■□□□□ 0.02
SND1-203ENST00000463020 E2F3O00716 465 aa15.18■□□□□ 0.02
SND1-203ENST00000463020 PPP1R12AO14974 1030 aaPredicted RBP15.18■□□□□ 0.02
SND1-203ENST00000463020 LDB2O43679 373 aa15.18■□□□□ 0.02
SND1-203ENST00000463020 KIF5CO60282 957 aa15.18■□□□□ 0.02
SND1-203ENST00000463020 AGTP01019 485 aa15.18■□□□□ 0.02
SND1-203ENST00000463020 UMODP07911 640 aa15.18■□□□□ 0.02
SND1-203ENST00000463020 SLC35G4P0C7Q5 338 aa15.18■□□□□ 0.02
SND1-203ENST00000463020 MSH3P20585 1137 aa15.18■□□□□ 0.02
SND1-203ENST00000463020 GABRA4P48169 554 aa15.18■□□□□ 0.02
SND1-203ENST00000463020 RRADP55042 308 aa15.18■□□□□ 0.02
SND1-203ENST00000463020 BCL7AQ4VC05 210 aa15.18■□□□□ 0.02
SND1-203ENST00000463020 DCAF10Q5QP82 559 aa15.18■□□□□ 0.02
SND1-203ENST00000463020 CCDC70Q6NSX1 233 aa15.18■□□□□ 0.02
SND1-203ENST00000463020 PPP1R32Q7Z5V6 425 aa15.18■□□□□ 0.02
SND1-203ENST00000463020 HPS6Q86YV9 775 aa15.18■□□□□ 0.02
SND1-203ENST00000463020 ZNF567Q8N184 647 aa15.18■□□□□ 0.02
SND1-203ENST00000463020 CARFQ8N187 725 aa15.18■□□□□ 0.02
SND1-203ENST00000463020 GALNT16Q8N428 558 aa15.18■□□□□ 0.02
SND1-203ENST00000463020 ZNF398Q8TD17 642 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms