RNA–Protein interactions for RNA: ENST00000462970.5

PSMD4-208, Transcript of proteasome 26S subunit, non-ATPase 4, human

TSL 5

Gene PSMD4, Length 900 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD4-208	ENST00000462970	NIPSNAP2	O75323	286 aa		9.37	□□□□□ -0.91
PSMD4-208	ENST00000462970	CCL4	P13236	92 aa		9.37	□□□□□ -0.91
PSMD4-208	ENST00000462970	POLR2C	P19387	275 aa	Predicted RBP	9.37	□□□□□ -0.91
PSMD4-208	ENST00000462970	CHRM3	P20309	590 aa		9.37	□□□□□ -0.91
PSMD4-208	ENST00000462970	ETV5	P41161	510 aa		9.37	□□□□□ -0.91
PSMD4-208	ENST00000462970	SLC1A2	P43004	574 aa		9.37	□□□□□ -0.91
PSMD4-208	ENST00000462970	ARL4D	P49703	201 aa		9.37	□□□□□ -0.91
PSMD4-208	ENST00000462970	MPP1	Q00013	466 aa		9.37	□□□□□ -0.91
PSMD4-208	ENST00000462970	SLC7A5	Q01650	507 aa		9.37	□□□□□ -0.91
PSMD4-208	ENST00000462970	WHAMMP3	Q1A5X7	153 aa		9.37	□□□□□ -0.91
PSMD4-208	ENST00000462970	TYSND1	Q2T9J0	566 aa		9.37	□□□□□ -0.91
PSMD4-208	ENST00000462970	HSP90AA5P	Q58FG0	334 aa		9.37	□□□□□ -0.91
PSMD4-208	ENST00000462970	ZNF789	Q5FWF6	425 aa		9.37	□□□□□ -0.91
PSMD4-208	ENST00000462970	SPANXN3	Q5MJ09	141 aa		9.37	□□□□□ -0.91
PSMD4-208	ENST00000462970	CACHD1	Q5VU97	1274 aa		9.37	□□□□□ -0.91
PSMD4-208	ENST00000462970	ARMC3	Q5W041	872 aa		9.37	□□□□□ -0.91
PSMD4-208	ENST00000462970	CAPRIN2	Q6IMN6	1127 aa	Known RBP	9.37	□□□□□ -0.91
PSMD4-208	ENST00000462970	KLHL35	Q6PF15	583 aa		9.37	□□□□□ -0.91
PSMD4-208	ENST00000462970	WDR74	Q6RFH5	385 aa	Predicted RBP	9.37	□□□□□ -0.91
PSMD4-208	ENST00000462970	XKR5	Q6UX68	686 aa		9.37	□□□□□ -0.91
PSMD4-208	ENST00000462970	OTOA	Q7RTW8	1153 aa		9.37	□□□□□ -0.91
PSMD4-208	ENST00000462970	TMEM135	Q86UB9	458 aa		9.37	□□□□□ -0.91
PSMD4-208	ENST00000462970	OOSP2	Q86WS3	158 aa		9.37	□□□□□ -0.91
PSMD4-208	ENST00000462970	CILP2	Q8IUL8	1156 aa		9.37	□□□□□ -0.91
PSMD4-208	ENST00000462970	IGDCC3	Q8IVU1	814 aa		9.37	□□□□□ -0.91
PSMD4-208	ENST00000462970	LSMEM2	Q8N112	164 aa		9.37	□□□□□ -0.91
PSMD4-208	ENST00000462970	KDF1	Q8NAX2	398 aa	Predicted RBP	9.37	□□□□□ -0.91
PSMD4-208	ENST00000462970	AGBL5	Q8NDL9	886 aa		9.37	□□□□□ -0.91
PSMD4-208	ENST00000462970	OR4E2	Q8NGC2	313 aa		9.37	□□□□□ -0.91
PSMD4-208	ENST00000462970	OR5AR1	Q8NGP9	310 aa		9.37	□□□□□ -0.91
PSMD4-208	ENST00000462970	KIF18A	Q8NI77	898 aa		9.37	□□□□□ -0.91
PSMD4-208	ENST00000462970	GABPB2	Q8TAK5	448 aa	Predicted RBP	9.37	□□□□□ -0.91
PSMD4-208	ENST00000462970	CALML6	Q8TD86	181 aa		9.37	□□□□□ -0.91
PSMD4-208	ENST00000462970	ASZ1	Q8WWH4	475 aa		9.37	□□□□□ -0.91
PSMD4-208	ENST00000462970	LPGAT1	Q92604	370 aa		9.37	□□□□□ -0.91
PSMD4-208	ENST00000462970	RNF31	Q96EP0	1072 aa		9.37	□□□□□ -0.91
PSMD4-208	ENST00000462970	ZDHHC12	Q96GR4	267 aa		9.37	□□□□□ -0.91
PSMD4-208	ENST00000462970	PRR11	Q96HE9	360 aa	Predicted RBP	9.37	□□□□□ -0.91
PSMD4-208	ENST00000462970	PANX3	Q96QZ0	392 aa		9.37	□□□□□ -0.91
PSMD4-208	ENST00000462970	NAT9	Q9BTE0	207 aa		9.37	□□□□□ -0.91
PSMD4-208	ENST00000462970	CARD6	Q9BX69	1037 aa		9.37	□□□□□ -0.91
PSMD4-208	ENST00000462970	RAB17	Q9H0T7	212 aa		9.37	□□□□□ -0.91
PSMD4-208	ENST00000462970	P2RY12	Q9H244	342 aa		9.37	□□□□□ -0.91
PSMD4-208	ENST00000462970	TRIT1	Q9H3H1	467 aa	Known RBP	9.37	□□□□□ -0.91
PSMD4-208	ENST00000462970	SRMS	Q9H3Y6	488 aa		9.37	□□□□□ -0.91
PSMD4-208	ENST00000462970	XKR8	Q9H6D3	395 aa		9.37	□□□□□ -0.91
PSMD4-208	ENST00000462970	KIR3DX1	Q9H7L2	352 aa		9.37	□□□□□ -0.91
PSMD4-208	ENST00000462970	UCK1	Q9HA47	277 aa		9.37	□□□□□ -0.91
PSMD4-208	ENST00000462970	THSD1	Q9NS62	852 aa		9.37	□□□□□ -0.91
PSMD4-208	ENST00000462970	OGFR	Q9NZT2	677 aa		9.37	□□□□□ -0.91
PSMD4-208	ENST00000462970	CIDEB	Q9UHD4	219 aa		9.37	□□□□□ -0.91
PSMD4-208	ENST00000462970	FBXO5	Q9UKT4	447 aa		9.37	□□□□□ -0.91
PSMD4-208	ENST00000462970	PLAGL1	Q9UM63	463 aa		9.37	□□□□□ -0.91
PSMD4-208	ENST00000462970	VPS9D1	Q9Y2B5	631 aa		9.37	□□□□□ -0.91
PSMD4-208	ENST00000462970	FAM169A	Q9Y6X4	670 aa		9.37	□□□□□ -0.91
PSMD4-208	ENST00000462970	ZZEF1	O43149	2961 aa		9.36	□□□□□ -0.91
PSMD4-208	ENST00000462970	PKD1L2	Q7Z442	2459 aa		9.36	□□□□□ -0.91
PSMD4-208	ENST00000462970	SLC5A10	A0PJK1	596 aa		9.36	□□□□□ -0.91
PSMD4-208	ENST00000462970	SRRM3	A6NNA2	597 aa	Predicted RBP	9.36	□□□□□ -0.91
PSMD4-208	ENST00000462970	BHMG1	C9JSJ3	638 aa	Predicted RBP	9.36	□□□□□ -0.91
PSMD4-208	ENST00000462970		H3BMM5	538 aa		9.36	□□□□□ -0.91
PSMD4-208	ENST00000462970	HGS	O14964	777 aa	Predicted RBP	9.36	□□□□□ -0.91
PSMD4-208	ENST00000462970	TTC4	O95801	387 aa		9.36	□□□□□ -0.91
PSMD4-208	ENST00000462970	S1PR4	O95977	384 aa		9.36	□□□□□ -0.91
PSMD4-208	ENST00000462970	ESR1	P03372	595 aa		9.36	□□□□□ -0.91
PSMD4-208	ENST00000462970	THRA	P10827	490 aa		9.36	□□□□□ -0.91
PSMD4-208	ENST00000462970	PKM	P14618	531 aa	Known RBP	9.36	□□□□□ -0.91
PSMD4-208	ENST00000462970	RPS3	P23396	243 aa	Known RBP eCLIP	9.36	□□□□□ -0.91	8e-10	■■■■□ 20.7
PSMD4-208	ENST00000462970	AOAH	P28039	575 aa		9.36	□□□□□ -0.91
PSMD4-208	ENST00000462970	ABCG1	P45844	678 aa		9.36	□□□□□ -0.91
PSMD4-208	ENST00000462970	CAPZB	P47756	277 aa		9.36	□□□□□ -0.91
PSMD4-208	ENST00000462970	CD151	P48509	253 aa		9.36	□□□□□ -0.91
PSMD4-208	ENST00000462970	CARS	P49589	748 aa	Known RBP	9.36	□□□□□ -0.91
PSMD4-208	ENST00000462970	PLTP	P55058	493 aa		9.36	□□□□□ -0.91
PSMD4-208	ENST00000462970	PPP1CA	P62136	330 aa		9.36	□□□□□ -0.91
PSMD4-208	ENST00000462970	FOXM1	Q08050	763 aa		9.36	□□□□□ -0.91
PSMD4-208	ENST00000462970	PRKAA1	Q13131	559 aa		9.36	□□□□□ -0.91
PSMD4-208	ENST00000462970	EIF3I	Q13347	325 aa	Known RBP	9.36	□□□□□ -0.91
PSMD4-208	ENST00000462970	SQSTM1	Q13501	440 aa		9.36	□□□□□ -0.91
PSMD4-208	ENST00000462970	TRA2A	Q13595	282 aa	Known RBP eCLIP	9.36	□□□□□ -0.91
PSMD4-208	ENST00000462970	TBC1D25	Q3MII6	688 aa		9.36	□□□□□ -0.91
PSMD4-208	ENST00000462970	ZNF658B	Q4V348	819 aa	Predicted RBP	9.36	□□□□□ -0.91
PSMD4-208	ENST00000462970	CTSL3P	Q5NE16	218 aa		9.36	□□□□□ -0.91
PSMD4-208	ENST00000462970	DNTTIP2	Q5QJE6	756 aa	Known RBP	9.36	□□□□□ -0.91
PSMD4-208	ENST00000462970	UNC5A	Q6ZN44	842 aa		9.36	□□□□□ -0.91
PSMD4-208	ENST00000462970	CENPU	Q71F23	418 aa		9.36	□□□□□ -0.91
PSMD4-208	ENST00000462970	PROSER1	Q86XN7	944 aa		9.36	□□□□□ -0.91
PSMD4-208	ENST00000462970	VRK3	Q8IV63	474 aa		9.36	□□□□□ -0.91
PSMD4-208	ENST00000462970	ZBED8	Q8IZ13	594 aa		9.36	□□□□□ -0.91
PSMD4-208	ENST00000462970	FBXO36	Q8NEA4	188 aa		9.36	□□□□□ -0.91
PSMD4-208	ENST00000462970	MNS1	Q8NEH6	495 aa		9.36	□□□□□ -0.91
PSMD4-208	ENST00000462970	ACVR1C	Q8NER5	493 aa		9.36	□□□□□ -0.91
PSMD4-208	ENST00000462970	FGF11	Q92914	225 aa		9.36	□□□□□ -0.91
PSMD4-208	ENST00000462970	USP7	Q93009	1102 aa		9.36	□□□□□ -0.91
PSMD4-208	ENST00000462970	ART4	Q93070	314 aa		9.36	□□□□□ -0.91
PSMD4-208	ENST00000462970	C9orf72	Q96LT7	481 aa		9.36	□□□□□ -0.91
PSMD4-208	ENST00000462970	SLC46A1	Q96NT5	459 aa		9.36	□□□□□ -0.91
PSMD4-208	ENST00000462970	NRTN	Q99748	197 aa		9.36	□□□□□ -0.91
PSMD4-208	ENST00000462970	CTRC	Q99895	268 aa		9.36	□□□□□ -0.91
PSMD4-208	ENST00000462970	MVB12B	Q9H7P6	319 aa		9.36	□□□□□ -0.91

Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms