RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 ZNF462Q96JM2 2506 aa9.9□□□□□ -0.83
SF3A3-204ENST00000462258 BOD1L1Q8NFC6 3051 aa9.89□□□□□ -0.83
SF3A3-204ENST00000462258 GSAPA4D1B5 854 aa9.89□□□□□ -0.83
SF3A3-204ENST00000462258 GOLGA6L3A6NEY3 463 aa9.89□□□□□ -0.83
SF3A3-204ENST00000462258 F8W8V4 182 aa9.89□□□□□ -0.83
SF3A3-204ENST00000462258 AP3B1O00203 1094 aa9.89□□□□□ -0.83
SF3A3-204ENST00000462258 OR1I1O60431 355 aa9.89□□□□□ -0.83
SF3A3-204ENST00000462258 TIAF1O95411 115 aa9.89□□□□□ -0.83
SF3A3-204ENST00000462258 ZBTB11O95625 1053 aaPredicted RBP9.89□□□□□ -0.83
SF3A3-204ENST00000462258 FOLR1P15328 257 aa9.89□□□□□ -0.83
SF3A3-204ENST00000462258 POLR2CP19387 275 aaPredicted RBP9.89□□□□□ -0.83
SF3A3-204ENST00000462258 TPSB2P20231 275 aa9.89□□□□□ -0.83
SF3A3-204ENST00000462258 CRADDP78560 199 aa9.89□□□□□ -0.83
SF3A3-204ENST00000462258 HSD11B2P80365 405 aa9.89□□□□□ -0.83
SF3A3-204ENST00000462258 ACY1Q03154 408 aa9.89□□□□□ -0.83
SF3A3-204ENST00000462258 CDC20Q12834 499 aa9.89□□□□□ -0.83
SF3A3-204ENST00000462258 SEMA3AQ14563 771 aa9.89□□□□□ -0.83
SF3A3-204ENST00000462258 BRD3Q15059 726 aa9.89□□□□□ -0.83
SF3A3-204ENST00000462258 TPSAB1Q15661 275 aa9.89□□□□□ -0.83
SF3A3-204ENST00000462258 LINC00303Q3SY05 128 aa9.89□□□□□ -0.83
SF3A3-204ENST00000462258 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.89□□□□□ -0.83
SF3A3-204ENST00000462258 PCID2Q5JVF3 399 aa9.89□□□□□ -0.83
SF3A3-204ENST00000462258 C6orf15Q6UXA7 325 aaPredicted RBP9.89□□□□□ -0.83
SF3A3-204ENST00000462258 CERS6Q6ZMG9 384 aa9.89□□□□□ -0.83
SF3A3-204ENST00000462258 CARFQ8N187 725 aa9.89□□□□□ -0.83
SF3A3-204ENST00000462258 GALNT6Q8NCL4 622 aa9.89□□□□□ -0.83
SF3A3-204ENST00000462258 OR4E2Q8NGC2 313 aa9.89□□□□□ -0.83
SF3A3-204ENST00000462258 STARD8Q92502 1023 aa9.89□□□□□ -0.83
SF3A3-204ENST00000462258 TFGQ92734 400 aaPredicted RBP9.89□□□□□ -0.83
SF3A3-204ENST00000462258 SLC45A3Q96JT2 553 aa9.89□□□□□ -0.83
SF3A3-204ENST00000462258 IL22Q9GZX6 179 aa9.89□□□□□ -0.83
SF3A3-204ENST00000462258 MVB12BQ9H7P6 319 aa9.89□□□□□ -0.83
SF3A3-204ENST00000462258 HOMER3Q9NSC5 361 aa9.89□□□□□ -0.83
SF3A3-204ENST00000462258 CATSPERZQ9NTU4 200 aa9.89□□□□□ -0.83
SF3A3-204ENST00000462258 RARRES3Q9UL19 164 aa9.89□□□□□ -0.83
SF3A3-204ENST00000462258 TTC7AQ9ULT0 858 aaPredicted RBP9.89□□□□□ -0.83
SF3A3-204ENST00000462258 JRKLQ9Y4A0 524 aa9.89□□□□□ -0.83
SF3A3-204ENST00000462258 RPS6KL1Q9Y6S9 549 aa9.89□□□□□ -0.83
SF3A3-204ENST00000462258 SNRNP200O75643 2136 aaKnown RBP9.88□□□□□ -0.83
SF3A3-204ENST00000462258 SLC5A10A0PJK1 596 aa9.88□□□□□ -0.83
SF3A3-204ENST00000462258 BTN3A1O00481 513 aa9.88□□□□□ -0.83
SF3A3-204ENST00000462258 SPAG6O75602 509 aa9.88□□□□□ -0.83
SF3A3-204ENST00000462258 FAM87AP0C7U9 286 aa9.88□□□□□ -0.83
SF3A3-204ENST00000462258 PRKAR1AP10644 381 aa9.88□□□□□ -0.83
SF3A3-204ENST00000462258 CDH3P22223 829 aa9.88□□□□□ -0.83
SF3A3-204ENST00000462258 MGAT1P26572 445 aa9.88□□□□□ -0.83
SF3A3-204ENST00000462258 DLSTP36957 453 aa9.88□□□□□ -0.83
SF3A3-204ENST00000462258 PPARGP37231 505 aaPredicted RBP9.88□□□□□ -0.83
SF3A3-204ENST00000462258 VPS41P49754 854 aa9.88□□□□□ -0.83
SF3A3-204ENST00000462258 TERF1P54274 439 aa9.88□□□□□ -0.83
SF3A3-204ENST00000462258 TUBB4BP68371 445 aa9.88□□□□□ -0.83
SF3A3-204ENST00000462258 PLOD1Q02809 727 aaPredicted RBP9.88□□□□□ -0.83
SF3A3-204ENST00000462258 TUBB2AQ13885 445 aa9.88□□□□□ -0.83
SF3A3-204ENST00000462258 TRIP13Q15645 432 aaPredicted RBP9.88□□□□□ -0.83
SF3A3-204ENST00000462258 TBR1Q16650 682 aa9.88□□□□□ -0.83
SF3A3-204ENST00000462258 KCTD19Q17RG1 926 aaPredicted RBP9.88□□□□□ -0.83
SF3A3-204ENST00000462258 TMTC4Q5T4D3 741 aa9.88□□□□□ -0.83
SF3A3-204ENST00000462258 BORAQ6PGQ7 559 aa9.88□□□□□ -0.83
SF3A3-204ENST00000462258 FBXO38Q6PIJ6 1188 aa9.88□□□□□ -0.83
SF3A3-204ENST00000462258 NAPRTQ6XQN6 538 aa9.88□□□□□ -0.83
SF3A3-204ENST00000462258 AMIGO1Q86WK6 493 aa9.88□□□□□ -0.83
SF3A3-204ENST00000462258 RASGEF1CQ8N431 466 aa9.88□□□□□ -0.83
SF3A3-204ENST00000462258 D2HGDHQ8N465 521 aa9.88□□□□□ -0.83
SF3A3-204ENST00000462258 OTUD6BQ8N6M0 293 aa9.88□□□□□ -0.83
SF3A3-204ENST00000462258 OR5AR1Q8NGP9 310 aa9.88□□□□□ -0.83
SF3A3-204ENST00000462258 LKAAEAR1Q8TD35 194 aa9.88□□□□□ -0.83
SF3A3-204ENST00000462258 SGSM3Q96HU1 749 aa9.88□□□□□ -0.83
SF3A3-204ENST00000462258 PPM1MQ96MI6 270 aa9.88□□□□□ -0.83
SF3A3-204ENST00000462258 NRTNQ99748 197 aa9.88□□□□□ -0.83
SF3A3-204ENST00000462258 TUBB2BQ9BVA1 445 aa9.88□□□□□ -0.83
SF3A3-204ENST00000462258 TSSK1BQ9BXA7 367 aa9.88□□□□□ -0.83
SF3A3-204ENST00000462258 TFB2MQ9H5Q4 396 aaKnown RBP9.88□□□□□ -0.83
SF3A3-204ENST00000462258 FANCEQ9HB96 536 aa9.88□□□□□ -0.83
SF3A3-204ENST00000462258 CHRAC1Q9NRG0 131 aa9.88□□□□□ -0.83
SF3A3-204ENST00000462258 FGF21Q9NSA1 209 aa9.88□□□□□ -0.83
SF3A3-204ENST00000462258 TREX1Q9NSU2 369 aa9.88□□□□□ -0.83
SF3A3-204ENST00000462258 SYBUQ9NX95 663 aa9.88□□□□□ -0.83
SF3A3-204ENST00000462258 BFARQ9NZS9 450 aa9.88□□□□□ -0.83
SF3A3-204ENST00000462258 MARCH4Q9P2E8 410 aaPredicted RBP9.88□□□□□ -0.83
SF3A3-204ENST00000462258 IL17BQ9UHF5 180 aa9.88□□□□□ -0.83
SF3A3-204ENST00000462258 ANAPC5Q9UJX4 755 aa9.88□□□□□ -0.83
SF3A3-204ENST00000462258 CROTQ9UKG9 612 aa9.88□□□□□ -0.83
SF3A3-204ENST00000462258 ICKQ9UPZ9 632 aa9.88□□□□□ -0.83
SF3A3-204ENST00000462258 ASF1AQ9Y294 204 aa9.88□□□□□ -0.83
SF3A3-204ENST00000462258 BTRCQ9Y297 605 aa9.88□□□□□ -0.83
SF3A3-204ENST00000462258 MRPS18BQ9Y676 258 aaKnown RBP9.88□□□□□ -0.83
SF3A3-204ENST00000462258 TLN1Q9Y490 2541 aaKnown RBP9.88□□□□□ -0.83
SF3A3-204ENST00000462258 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.87□□□□□ -0.83
SF3A3-204ENST00000462258 TCRBV7S3A2A0A539 114 aa9.87□□□□□ -0.83
SF3A3-204ENST00000462258 C2orf74A8MZ97 194 aa9.87□□□□□ -0.83
SF3A3-204ENST00000462258 PGRMC1O00264 195 aaKnown RBP9.87□□□□□ -0.83
SF3A3-204ENST00000462258 BTN3A3O00478 584 aa9.87□□□□□ -0.83
SF3A3-204ENST00000462258 CPNE3O75131 537 aaKnown RBP9.87□□□□□ -0.83
SF3A3-204ENST00000462258 MT-ND3P03897 115 aa9.87□□□□□ -0.83
SF3A3-204ENST00000462258 ITGB6P18564 788 aa9.87□□□□□ -0.83
SF3A3-204ENST00000462258 ACADLP28330 430 aa9.87□□□□□ -0.83
SF3A3-204ENST00000462258 NMBRP28336 390 aa9.87□□□□□ -0.83
SF3A3-204ENST00000462258 OAS2P29728 719 aaKnown RBP9.87□□□□□ -0.83
SF3A3-204ENST00000462258 SHMT2P34897 504 aa9.87□□□□□ -0.83
SF3A3-204ENST00000462258 TTPAP49638 278 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms