RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 SLC28A1O00337 649 aa13.84□□□□□ -0.19
ERCC3-205ENST00000460485 RGS14O43566 566 aa13.84□□□□□ -0.19
ERCC3-205ENST00000460485 ALDOCP09972 364 aaKnown RBP13.84□□□□□ -0.19
ERCC3-205ENST00000460485 HIST1H2AGP0C0S8 130 aaPredicted RBP13.84□□□□□ -0.19
ERCC3-205ENST00000460485 ATP1B2P14415 290 aaPredicted RBP13.84□□□□□ -0.19
ERCC3-205ENST00000460485 EPB42P16452 691 aa13.84□□□□□ -0.19
ERCC3-205ENST00000460485 HIST1H2ADP20671 130 aa13.84□□□□□ -0.19
ERCC3-205ENST00000460485 AOAHP28039 575 aa13.84□□□□□ -0.19
ERCC3-205ENST00000460485 GKP32189 559 aa13.84□□□□□ -0.19
ERCC3-205ENST00000460485 THOP1P52888 689 aa13.84□□□□□ -0.19
ERCC3-205ENST00000460485 SESN3P58005 492 aa13.84□□□□□ -0.19
ERCC3-205ENST00000460485 MRPS35P82673 323 aaKnown RBP13.84□□□□□ -0.19
ERCC3-205ENST00000460485 EMX2Q04743 252 aa13.84□□□□□ -0.19
ERCC3-205ENST00000460485 RCAN2Q14206 197 aa13.84□□□□□ -0.19
ERCC3-205ENST00000460485 TRIM25Q14258 630 aaKnown RBP13.84□□□□□ -0.19
ERCC3-205ENST00000460485 DUSP6Q16828 381 aa13.84□□□□□ -0.19
ERCC3-205ENST00000460485 EML3Q32P44 896 aa13.84□□□□□ -0.19
ERCC3-205ENST00000460485 RARS2Q5T160 578 aaKnown RBP13.84□□□□□ -0.19
ERCC3-205ENST00000460485 IRGCQ6NXR0 463 aa13.84□□□□□ -0.19
ERCC3-205ENST00000460485 BLOC1S3Q6QNY0 202 aa13.84□□□□□ -0.19
ERCC3-205ENST00000460485 DGLUCYQ7Z3D6 616 aa13.84□□□□□ -0.19
ERCC3-205ENST00000460485 CYP2U1Q7Z449 544 aa13.84□□□□□ -0.19
ERCC3-205ENST00000460485 TMIEQ8NEW7 156 aa13.84□□□□□ -0.19
ERCC3-205ENST00000460485 HMGCLL1Q8TB92 370 aa13.84□□□□□ -0.19
ERCC3-205ENST00000460485 BPIFB1Q8TDL5 484 aa13.84□□□□□ -0.19
ERCC3-205ENST00000460485 ASZ1Q8WWH4 475 aa13.84□□□□□ -0.19
ERCC3-205ENST00000460485 ATP6V1E2Q96A05 226 aa13.84□□□□□ -0.19
ERCC3-205ENST00000460485 RHBDF1Q96CC6 855 aa13.84□□□□□ -0.19
ERCC3-205ENST00000460485 DUS3LQ96G46 650 aaKnown RBP13.84□□□□□ -0.19
ERCC3-205ENST00000460485 HIST1H2AHQ96KK5 128 aa13.84□□□□□ -0.19
ERCC3-205ENST00000460485 MARK4Q96L34 752 aa13.84□□□□□ -0.19
ERCC3-205ENST00000460485 HIST1H2AJQ99878 128 aa13.84□□□□□ -0.19
ERCC3-205ENST00000460485 H2AFJQ9BTM1 129 aa13.84□□□□□ -0.19
ERCC3-205ENST00000460485 EFHD1Q9BUP0 239 aa13.84□□□□□ -0.19
ERCC3-205ENST00000460485 BOCQ9BWV1 1114 aa13.84□□□□□ -0.19
ERCC3-205ENST00000460485 SLC12A9Q9BXP2 914 aa13.84□□□□□ -0.19
ERCC3-205ENST00000460485 VCXQ9H320 206 aa13.84□□□□□ -0.19
ERCC3-205ENST00000460485 TUBB1Q9H4B7 451 aa13.84□□□□□ -0.19
ERCC3-205ENST00000460485 ABCD2Q9UBJ2 740 aa13.84□□□□□ -0.19
ERCC3-205ENST00000460485 LEF1Q9UJU2 399 aaPredicted RBP13.84□□□□□ -0.19
ERCC3-205ENST00000460485 AP3M1Q9Y2T2 418 aa13.84□□□□□ -0.19
ERCC3-205ENST00000460485 PCDHGA7Q9Y5G6 932 aa13.84□□□□□ -0.19
ERCC3-205ENST00000460485 GPR45Q9Y5Y3 372 aa13.84□□□□□ -0.19
ERCC3-205ENST00000460485 HCFC2Q9Y5Z7 792 aa13.84□□□□□ -0.19
ERCC3-205ENST00000460485 WNT6Q9Y6F9 365 aa13.84□□□□□ -0.19
ERCC3-205ENST00000460485 EPG5Q9HCE0 2579 aa13.84□□□□□ -0.19
ERCC3-205ENST00000460485 A0A1W2PP18 115 aa13.83□□□□□ -0.2
ERCC3-205ENST00000460485 FAM234BA2RU67 622 aa13.83□□□□□ -0.2
ERCC3-205ENST00000460485 NCF1BA6NI72 391 aaPredicted RBP13.83□□□□□ -0.2
ERCC3-205ENST00000460485 NCF1CA8MVU1 366 aaPredicted RBP13.83□□□□□ -0.2
ERCC3-205ENST00000460485 NRG2O14511 850 aaPredicted RBP13.83□□□□□ -0.2
ERCC3-205ENST00000460485 TRIM24O15164 1050 aa13.83□□□□□ -0.2
ERCC3-205ENST00000460485 EEDO75530 441 aaKnown RBP13.83□□□□□ -0.2
ERCC3-205ENST00000460485 STK16O75716 305 aa13.83□□□□□ -0.2
ERCC3-205ENST00000460485 CSPG5O95196 566 aa13.83□□□□□ -0.2
ERCC3-205ENST00000460485 CISD3P0C7P0 127 aa13.83□□□□□ -0.2
ERCC3-205ENST00000460485 NCF1P14598 390 aaPredicted RBP13.83□□□□□ -0.2
ERCC3-205ENST00000460485 ACPPP15309 386 aa13.83□□□□□ -0.2
ERCC3-205ENST00000460485 AKT1P31749 480 aa13.83□□□□□ -0.2
ERCC3-205ENST00000460485 MMP12P39900 470 aa13.83□□□□□ -0.2
ERCC3-205ENST00000460485 HSPA13P48723 471 aa13.83□□□□□ -0.2
ERCC3-205ENST00000460485 TRAF3Q13114 568 aa13.83□□□□□ -0.2
ERCC3-205ENST00000460485 ATP13A5Q4VNC0 1218 aa13.83□□□□□ -0.2
ERCC3-205ENST00000460485 TCHHL1Q5QJ38 904 aaPredicted RBP13.83□□□□□ -0.2
ERCC3-205ENST00000460485 HENMT1Q5T8I9 393 aaKnown RBP13.83□□□□□ -0.2
ERCC3-205ENST00000460485 RPS27LQ71UM5 84 aaKnown RBP13.83□□□□□ -0.2
ERCC3-205ENST00000460485 MILR1Q7Z6M3 343 aa13.83□□□□□ -0.2
ERCC3-205ENST00000460485 DSG4Q86SJ6 1040 aa13.83□□□□□ -0.2
ERCC3-205ENST00000460485 NLRP8Q86W28 1048 aa13.83□□□□□ -0.2
ERCC3-205ENST00000460485 PLCD3Q8N3E9 789 aa13.83□□□□□ -0.2
ERCC3-205ENST00000460485 GLB1L3Q8NCI6 653 aaPredicted RBP13.83□□□□□ -0.2
ERCC3-205ENST00000460485 DNAJB8Q8NHS0 232 aa13.83□□□□□ -0.2
ERCC3-205ENST00000460485 PIP4K2CQ8TBX8 421 aa13.83□□□□□ -0.2
ERCC3-205ENST00000460485 METTL6Q8TCB7 284 aa13.83□□□□□ -0.2
ERCC3-205ENST00000460485 KCNV2Q8TDN2 545 aa13.83□□□□□ -0.2
ERCC3-205ENST00000460485 UCMAQ8WVF2 138 aa13.83□□□□□ -0.2
ERCC3-205ENST00000460485 ATL1Q8WXF7 558 aa13.83□□□□□ -0.2
ERCC3-205ENST00000460485 GLMNQ92990 594 aa13.83□□□□□ -0.2
ERCC3-205ENST00000460485 POP5Q969H6 163 aaKnown RBP13.83□□□□□ -0.2
ERCC3-205ENST00000460485 C3orf30Q96M34 536 aa13.83□□□□□ -0.2
ERCC3-205ENST00000460485 NR1H4Q96RI1 486 aaPredicted RBP13.83□□□□□ -0.2
ERCC3-205ENST00000460485 NPAS2Q99743 824 aa13.83□□□□□ -0.2
ERCC3-205ENST00000460485 SPATA16Q9BXB7 569 aa13.83□□□□□ -0.2
ERCC3-205ENST00000460485 NOL11Q9H8H0 719 aaKnown RBP13.83□□□□□ -0.2
ERCC3-205ENST00000460485 IPPKQ9H8X2 491 aa13.83□□□□□ -0.2
ERCC3-205ENST00000460485 PARVBQ9HBI1 364 aa13.83□□□□□ -0.2
ERCC3-205ENST00000460485 TMEM181Q9P2C4 612 aa13.83□□□□□ -0.2
ERCC3-205ENST00000460485 SLCO3A1Q9UIG8 710 aa13.83□□□□□ -0.2
ERCC3-205ENST00000460485 PRSS21Q9Y6M0 314 aa13.83□□□□□ -0.2
ERCC3-205ENST00000460485 DMXL1Q9Y485 3027 aa13.82□□□□□ -0.2
ERCC3-205ENST00000460485 WDR87Q6ZQQ6 2873 aa13.82□□□□□ -0.2
ERCC3-205ENST00000460485 SERTM1A2A2V5 107 aa13.82□□□□□ -0.2
ERCC3-205ENST00000460485 LRRC14BA6NHZ5 514 aa13.82□□□□□ -0.2
ERCC3-205ENST00000460485 NPIPB8E9PQR5 432 aa13.82□□□□□ -0.2
ERCC3-205ENST00000460485 NR5A2O00482 541 aa13.82□□□□□ -0.2
ERCC3-205ENST00000460485 FBP2O00757 339 aa13.82□□□□□ -0.2
ERCC3-205ENST00000460485 BNIP3LO60238 219 aa13.82□□□□□ -0.2
ERCC3-205ENST00000460485 UGDHO60701 494 aa13.82□□□□□ -0.2
ERCC3-205ENST00000460485 LEFTY1O75610 366 aa13.82□□□□□ -0.2
ERCC3-205ENST00000460485 OR4F21O95013 312 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms