RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 QSOX1O00391 747 aa22.13■■□□□ 1.13
PTPN4-207ENST00000460162 MSL3P1P0C860 447 aa22.13■■□□□ 1.13
PTPN4-207ENST00000460162 TPH1P17752 444 aa22.13■■□□□ 1.13
PTPN4-207ENST00000460162 PSMA3P25788 255 aa22.13■■□□□ 1.13
PTPN4-207ENST00000460162 ITIH4Q14624 930 aa22.13■■□□□ 1.13
PTPN4-207ENST00000460162 DBN1Q16643 649 aa22.13■■□□□ 1.13
PTPN4-207ENST00000460162 ZNF517Q6ZMY9 492 aaPredicted RBP22.13■■□□□ 1.13
PTPN4-207ENST00000460162 SYVN1Q86TM6 617 aa22.13■■□□□ 1.13
PTPN4-207ENST00000460162 PPM1MQ96MI6 270 aa22.13■■□□□ 1.13
PTPN4-207ENST00000460162 DESI2Q9BSY9 194 aa22.13■■□□□ 1.13
PTPN4-207ENST00000460162 PITPNM3Q9BZ71 974 aa22.13■■□□□ 1.13
PTPN4-207ENST00000460162 TFB2MQ9H5Q4 396 aaKnown RBP22.13■■□□□ 1.13
PTPN4-207ENST00000460162 TP53TG5Q9Y2B4 290 aa22.13■■□□□ 1.13
PTPN4-207ENST00000460162 MAN2B2Q9Y2E5 1009 aa22.13■■□□□ 1.13
PTPN4-207ENST00000460162 CAPN6Q9Y6Q1 641 aa22.13■■□□□ 1.13
PTPN4-207ENST00000460162 PTPN13Q12923 2485 aa22.12■■□□□ 1.13
PTPN4-207ENST00000460162 GSAPA4D1B5 854 aa22.12■■□□□ 1.13
PTPN4-207ENST00000460162 MROH6A6NGR9 719 aa22.12■■□□□ 1.13
PTPN4-207ENST00000460162 ERI2A8K979 691 aaKnown RBP22.12■■□□□ 1.13
PTPN4-207ENST00000460162 PRSS56P0CW18 603 aa22.12■■□□□ 1.13
PTPN4-207ENST00000460162 PTPN4P29074 926 aa22.12■■□□□ 1.13
PTPN4-207ENST00000460162 NSG1P42857 185 aa22.12■■□□□ 1.13
PTPN4-207ENST00000460162 GSDMDP57764 484 aa22.12■■□□□ 1.13
PTPN4-207ENST00000460162 RPS15P62841 145 aaKnown RBP22.12■■□□□ 1.13
PTPN4-207ENST00000460162 BOP1Q14137 746 aaKnown RBP22.12■■□□□ 1.13
PTPN4-207ENST00000460162 UGT8Q16880 541 aa22.12■■□□□ 1.13
PTPN4-207ENST00000460162 TCTN3Q6NUS6 607 aa22.12■■□□□ 1.13
PTPN4-207ENST00000460162 FBXO38Q6PIJ6 1188 aa22.12■■□□□ 1.13
PTPN4-207ENST00000460162 PACS1Q6VY07 963 aa22.12■■□□□ 1.13
PTPN4-207ENST00000460162 TMEM135Q86UB9 458 aa22.12■■□□□ 1.13
PTPN4-207ENST00000460162 APLFQ8IW19 511 aaPredicted RBP22.12■■□□□ 1.13
PTPN4-207ENST00000460162 PIANPQ8IYJ0 282 aa22.12■■□□□ 1.13
PTPN4-207ENST00000460162 CLDN19Q8N6F1 224 aa22.12■■□□□ 1.13
PTPN4-207ENST00000460162 OR52E1Q8NGJ3 308 aa22.12■■□□□ 1.13
PTPN4-207ENST00000460162 ALS2CR12Q96Q35 445 aa22.12■■□□□ 1.13
PTPN4-207ENST00000460162 TLR10Q9BXR5 811 aa22.12■■□□□ 1.13
PTPN4-207ENST00000460162 IMPACTQ9P2X3 320 aa22.12■■□□□ 1.13
PTPN4-207ENST00000460162 HECTD1Q9ULT8 2610 aa22.12■■□□□ 1.13
PTPN4-207ENST00000460162 A0A0U1RQJ8 604 aa22.11■■□□□ 1.13
PTPN4-207ENST00000460162 TCRBV7S2A1N4TA0A589 114 aa22.11■■□□□ 1.13
PTPN4-207ENST00000460162 SLC9B1P1A6NJY1 282 aa22.11■■□□□ 1.13
PTPN4-207ENST00000460162 BTN3A1O00481 513 aa22.11■■□□□ 1.13
PTPN4-207ENST00000460162 LIN7AO14910 233 aaPredicted RBP22.11■■□□□ 1.13
PTPN4-207ENST00000460162 MSNP26038 577 aaKnown RBP22.11■■□□□ 1.13
PTPN4-207ENST00000460162 PDHA2P29803 388 aa22.11■■□□□ 1.13
PTPN4-207ENST00000460162 PREPP48147 710 aa22.11■■□□□ 1.13
PTPN4-207ENST00000460162 KLRB1Q12918 225 aa22.11■■□□□ 1.13
PTPN4-207ENST00000460162 GPS2Q13227 327 aa22.11■■□□□ 1.13
PTPN4-207ENST00000460162 LAMB3Q13751 1172 aa22.11■■□□□ 1.13
PTPN4-207ENST00000460162 IZUMO3Q5VZ72 239 aa22.11■■□□□ 1.13
PTPN4-207ENST00000460162 FAM199XQ6PEV8 388 aaPredicted RBP22.11■■□□□ 1.13
PTPN4-207ENST00000460162 THAP4Q8WY91 577 aa22.11■■□□□ 1.13
PTPN4-207ENST00000460162 CPT1BQ92523 772 aa22.11■■□□□ 1.13
PTPN4-207ENST00000460162 RUFY1Q96T51 708 aa22.11■■□□□ 1.13
PTPN4-207ENST00000460162 HGH1Q9BTY7 390 aa22.11■■□□□ 1.13
PTPN4-207ENST00000460162 FRMD8P1Q9BZ68 369 aaPredicted RBP22.11■■□□□ 1.13
PTPN4-207ENST00000460162 AKIRIN1Q9H9L7 192 aaPredicted RBP22.11■■□□□ 1.13
PTPN4-207ENST00000460162 PIH1D1Q9NWS0 290 aaKnown RBP22.11■■□□□ 1.13
PTPN4-207ENST00000460162 FLNCQ14315 2725 aa22.1■■□□□ 1.13
PTPN4-207ENST00000460162 BTN3A3O00478 584 aa22.1■■□□□ 1.13
PTPN4-207ENST00000460162 ARHGAP6O43182 974 aa22.1■■□□□ 1.13
PTPN4-207ENST00000460162 MAP3K7O43318 606 aa22.1■■□□□ 1.13
PTPN4-207ENST00000460162 FTH1P02794 183 aa22.1■■□□□ 1.13
PTPN4-207ENST00000460162 KLK3P07288 261 aaPredicted RBP22.1■■□□□ 1.13
PTPN4-207ENST00000460162 PRDX3P30048 256 aaKnown RBP22.1■■□□□ 1.13
PTPN4-207ENST00000460162 CDC25BP30305 580 aa22.1■■□□□ 1.13
PTPN4-207ENST00000460162 CDH17Q12864 832 aa22.1■■□□□ 1.13
PTPN4-207ENST00000460162 SEL1L2Q5TEA6 688 aa22.1■■□□□ 1.13
PTPN4-207ENST00000460162 MICALCLQ6ZW33 695 aa22.1■■□□□ 1.13
PTPN4-207ENST00000460162 AMIGO1Q86WK6 493 aa22.1■■□□□ 1.13
PTPN4-207ENST00000460162 ATG4AQ8WYN0 398 aa22.1■■□□□ 1.13
PTPN4-207ENST00000460162 TFGQ92734 400 aaPredicted RBP22.1■■□□□ 1.13
PTPN4-207ENST00000460162 MR1Q95460 341 aa22.1■■□□□ 1.13
PTPN4-207ENST00000460162 TBRG4Q969Z0 631 aaKnown RBP eCLIP22.1■■□□□ 1.13
PTPN4-207ENST00000460162 SMARCAL1Q9NZC9 954 aa22.1■■□□□ 1.13
PTPN4-207ENST00000460162 C2orf74A8MZ97 194 aa22.09■■□□□ 1.13
PTPN4-207ENST00000460162 GAS8O95995 478 aa22.09■■□□□ 1.13
PTPN4-207ENST00000460162 ST6GAL1P15907 406 aa22.09■■□□□ 1.13
PTPN4-207ENST00000460162 STIP1P31948 543 aaKnown RBP22.09■■□□□ 1.13
PTPN4-207ENST00000460162 FOXN2P32314 431 aa22.09■■□□□ 1.13
PTPN4-207ENST00000460162 RPS18P62269 152 aaKnown RBP22.09■■□□□ 1.13
PTPN4-207ENST00000460162 ABRQ12979 859 aa22.09■■□□□ 1.13
PTPN4-207ENST00000460162 SEMA5AQ13591 1074 aa22.09■■□□□ 1.13
PTPN4-207ENST00000460162 TAB3Q8N5C8 712 aaPredicted RBP22.09■■□□□ 1.13
PTPN4-207ENST00000460162 RNF10Q8N5U6 811 aaKnown RBP22.09■■□□□ 1.13
PTPN4-207ENST00000460162 OR52K1Q8NGK4 314 aa22.09■■□□□ 1.13
PTPN4-207ENST00000460162 HEATR9A2RTY3 570 aa22.08■■□□□ 1.13
PTPN4-207ENST00000460162 LIASO43766 372 aa22.08■■□□□ 1.13
PTPN4-207ENST00000460162 RORAP35398 523 aa22.08■■□□□ 1.13
PTPN4-207ENST00000460162 FDFT1P37268 417 aa22.08■■□□□ 1.13
PTPN4-207ENST00000460162 FOXK1P85037 733 aa22.08■■□□□ 1.13
PTPN4-207ENST00000460162 IL10RAQ13651 578 aa22.08■■□□□ 1.13
PTPN4-207ENST00000460162 OASLQ15646 514 aaKnown RBP22.08■■□□□ 1.13
PTPN4-207ENST00000460162 ZNF789Q5FWF6 425 aa22.08■■□□□ 1.13
PTPN4-207ENST00000460162 GAS2L3Q86XJ1 694 aa22.08■■□□□ 1.13
PTPN4-207ENST00000460162 DSELQ8IZU8 1212 aa22.08■■□□□ 1.13
PTPN4-207ENST00000460162 DNAAF3Q8N9W5 541 aa22.08■■□□□ 1.13
PTPN4-207ENST00000460162 SLC38A9Q8NBW4 561 aa22.08■■□□□ 1.13
PTPN4-207ENST00000460162 PHC3Q8NDX5 983 aa22.08■■□□□ 1.13
PTPN4-207ENST00000460162 UBE2Q2Q8WVN8 375 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms